Detailed information on CNT0002861 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002861

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)0.8790.9880.2880.7690.3350.2110.3301.552.6172.2471.4732.2613.3761.56leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)01230.250.50.751.251.51.752.252.52.753.253.53.75

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MREKEQMSCGFLKQLIIEPEWVWSWSFNSQFNLLWEQLEEGYCLKGPQHQDPL*

>peptide 2 (31 aa)
LFKLKKSPFFWVKFNVFAIFINDMNYFSRKH*

Sequence

>CNT0002861
GCCTATTTAAGTTGAAGAAAAGTCCCTTTTTTTGGGTGAAATTCAATGTTTTTGCTATATTTATTAATGACATGAACTATTTTTCGAGGAAACATTGAAG
TTGTGGAATCACAGATAGTTCAAGCTTGCAGAAAACTGCTGGATGAGAGAAAAAGAACAAATGTCTTGCGGTTTCTTGAAGCAATTAATCATTGAACCTG
AATGGGTCTGGAGCTGGAGTTTCAACTCCCAGTTCAACCTTCTTTGGGAGCAGCTTGAAGAAGGTTATTGCCTCAAGGGTCCCCAACACCAAGATCCCCT
ATGAGTACATTAGCACTGGACTTCGCCAGTGAAAAAGAGGCTAAGTCATGAAATGTCAAAAGTGATAGTTGAGCTTAGCTCATCAGTGAGCTAAGTGCAC
ATCCATCGCTAAGCGCAGCTTCAGCGCGCTTAGCACAACAAAAGAATCTGGCAAAGCATCAATATCAAGGTCGCGCACTAAGCGCGAGATCAATGCGCTA
AGCGCAGCAGTTGTCTTAAGCCAGGCTCAACGCACGACTGTTGCTAAGCTCAAATCCACTTACTCGCGCTAAGCGCAACGTCACGAATTCAGAGCCTATT
TAAAGTATGTCTTATGCAGAATTAGGGTACACAACTTATATAATACCTAGGGCATAGAATTCCACAGCACACCACAGTGCCTGTTACAGGAAAAGAGCTC
TGGAGGCAGCAAGAGGAGTAGCTTTTGCAGAGATACCTAGGTTTTGTAATCTAATTATTGTTAGGGTTTCTTCTGTAATGGCTGGCTAAACACCCTTGTA
GGGGATTTCTACTAAACAGCTTATGTAATTATTGTAATATCTAAT