Detailed information on CNT0002904 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q84UC7|BAC1_ARATH, E-value = 1e-22

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002904

Created with Highcharts 4.1.6Chart context menuExpression (RPKM)1.7993.6083.687000000000000leaves (SRR924099)leaves (SRR924144)leaves (SRR926169)seed (SRR639168)shoot apical meristem (SRR824155)shoot apical meristem (SRR824156)shoot apical meristem (SRR824157)shoot apical meristem (SRR824158)shoot apical meristem (SRR824159)shoot apical meristem (SRR824160)shoot apical meristem (SRR824161)shoot apical meristem (SRR824162)shoot apical meristem (SRR824163)whole seed (SRR639162)whole seed (SRR639164)012340.250.50.751.251.51.752.252.52.753.253.53.75

Peptides detected in this lncRNA

>peptide 1 (52 aa)
KFYIRFSAAAAITFSKIHSQTLNLTAHRGSLLVSFSAIAVALIASLGGQNQS*

Sequence

>CNT0002904
AAAGTTTTATATTCGTTTTTCTGCAGCAGCAGCAATTACGTTCTCTAAAATTCACTCCCAAACCCTAAACCTCACAGCACACAGAGGTTCGCTTTTGGTC
AGTTTCTCCGCCATTGCAGTAGCACTCATAGCTTCGCTAGGGGGGCAAAACCAATCGTAGTCTCTGAAGTCCAAGGGGAGGTATCATCTTTTATAGAAGG
GGGGCAAAACCAAGGAAATTTTAGATTGGTGACTGTGACAGCACTTGGCTTAATTGGTAATTTCCTCAGTCAGCCTCATTTTTCATAGTTTAAAATCTTG
GGCTTTATTCAATTAATTGCAAAGTAGAAAGAGCATATATATGGATTAAAATTGTGCCTACTTTGGAAATGCCTGGACCATACCTTTGGTACACCGACTT
ATGAATGTCTAGCTAAATATGTTAGATTGGGTGTGAAGAACAAAACTTTTGATCAATACACTAAGGCTTGCCTAAAAGATTGCTTCGATCTTTACTCGGA
TTCGCTTTCGGCTTTAGATGATGCTGTGGTTGCTTTCAAGTCCAAGGATTTGGACACGGCTAGTATAAACTTGAGTGCTACCTTGGATAATTCTGTTACA
TGTGAAGATCAATTCAAGGATAAGAAAGTTTTGGTTGACAGTTTTGCCTCTTGGTGTGGCAAAGACTTTAATTCAGACAAACCCTGATAAAAATTGTTCA
AGAAATCCTTTTCGGATCTTGAGTTCAATCTATCAAAAGGCTGGATTCAAGGGATGCTATACAGGTTTGGGTCCTACTGTAAGTCGAGCATTTCCTGCTA
ATGCTGCAACAATTGTCGCATGGGAG