Detailed information on CNT0002916 (Glycine max)


BLAST search results

BLAST vs PNRD: nothing found

BLAST vs Swiss-Prot:
sp|Q9LZR3|CSLA9_ARATH, E-value = 2e-11

BLAST vs NONCODE (A. thaliana): nothing found

Potential orthologs: nothing found

Most similar lncRNAs: nothing found

Expression of CNT0002916

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVVLNRRRRPISFLGQVLQRHYVIDIVCLK*

>peptide 2 (68 aa)
KSNQIYVDCRAMVKLLIIKCVRLYTLLAPMVLYQGRVTLDTLSPQSRQGSFSCGSKGVCMIMHQTTFM*

>peptide 3 (119 aa)
MFKITDINCVFLVVSRDAVGSSTYPFFDFNIWRILALNEAGGWKDRTTLEDMNLVVRANAYVDSLYIIYDKFEYLIRMKLTSTECCYCQTISHNKHDKSQ
HFLFSHLTLNIYTTLFLVL*

Sequence

>CNT0002916
AAGTCCAATCAGATATATGTAGACTGTAGAGCAATGGTGAAGTTACTAATCATTAAATGTGTTAGACTTTATACATTACTGGCACCAATGGTTCTGTATC
AGGGCAGAGTAACCCTGGATACCCTATCACCACAGTCGAGACAAGGCAGCTTTAGCTGTGGCTCAAAAGGGGTTTGTATGATAATGCATCAAACAACATT
CATGTAACTGCTCATCTTGCTATCCTGAAGAACACTTGGGTTATCACATAGGAATTCAAGCTGGGTCAAGTCCGTAGCCAGATTCAGGTTTGGAACTTAT
CCAAATTCAATTAGTTATAGTTTTTATCTTTCTTTATATTAATCCATAAAAAGTGTTTTAATTATCTGCTTTTGCTTCTTTGGTCCGTCACACGTGCTTG
CTTCTTTGGTCTTTTTGGTGAGTGAAAAAAACCAGAGTGAGAGATCTTTTGTAGATGCAACCATAGAATAAATAAACTAAACTTTTAACAAGATTCAACT
AAAAGAAAAAAAAAACAACTTTAATTTCTAAGAAGATTCTATAGATAATTACCTTAGAAAGTACTATATATTCTAAGACGGTCGTAGCACAACCGTTTTA
GAATGTAGTGCATTCTAAGTCGGTCTTGTGCTACGACCATCTTAGAATGTAGTACAATCTTAGTTGGTCTTTGAGTCTGGACCATCTAAGAATGTATAGT
ACATTCTAAGATGGTCGTGCTTAACCGTCGTCGTAGACCCATTAGTTTTCTAGGACAAGTGCTACAACGACATTACGTAATCGACATAGTATGTTTAAAA
TAACCGATATAAATTGTGTTTTTTTAGTAGTGTCAAGAGATGCAGTGGGGTCTTCCACTTACCCGTTCTTTGATTTCAACATATGGAGAATTTTGGCGTT
GAATGAGGCTGGTGGATGGAAGGATAGGACCACACTGGAAGATATGAACTTGGTGGTGCGAGCCAATGCCTATGTGGATTCATTGTATATAATATATGAT
AAATTCGAATACTTAATTAGAATGAAGTTGACAAGCACTGAATGTTGTTACTGCCAAACCATAAGCCATAACAAGCATGACAAGAGCCAACACTTTCTTT
TCTCCCATCTCACCTTGAATATCTATACTACTTTATTTTTGGTATTATGA