Query: CNT0011364
Subject: sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein

OS=Arabidopsis thaliana GN=LUG PE=1 SV=2

 Score =  865 bits (2234), Expect = 0.0,   Method: Compositional matrix adjust.
Identities = 447/737 (60%), Positives = 514/737 (69%), Gaps = 22/737 (2%)

Query: 174 DSLLRQNTGTANALATKMYEER---------LDDAAMKQRFSENVNQLLDPNHASVLKXX 224
+ ++RQN G+ ++LA+K YEER LD+AAMK RF +NV QLLDP+HAS+LK
Sbjct: 205 EPVMRQNPGSGSSLASKAYEERVKMPTQRESLDEAAMK-RFGDNVGQLLDPSHASILKSA 263

Query: 225 XXXXXGQPSGQMLHGTTGSMSPQVQARSQQLPGSTPDIKTEINPMLNPRAAGPEGSLIGI 284
GQP+GQ+LH T+G MSPQVQ R+QQLPGS DIK+EINP+L PR A PEGSLIGI
Sbjct: 264 AAS--GQPAGQVLHSTSGGMSPQVQTRNQQLPGSAVDIKSEINPVLTPRTAVPEGSLIGI 321

Query: 285 PGSNQAGNNLTLKGWPLTGYDQLRSSGLLQQPKSFMQGSQPFHXXXXXXXXXXXXXXXXX 344
PGSNQ NNLTLKGWPLTG+DQLRS GLLQQ K FMQ SQ FH
Sbjct: 322 PGSNQGSNNLTLKGWPLTGFDQLRS-GLLQQQKPFMQ-SQSFHQLNMLTPQHQQQLMLAQ 379

Query: 345 XXXTSPSASDVEXXXXXXXXXXXXXXXGKDGLSNSVGDVVPNMSSPSQGPCPVLPRGDQD 404
S S S+ E GKDGL +SVGDV+PN+ S Q +LPRGD D
Sbjct: 380 QNLNSQSVSE-ENRRLKMLLNNRSMTLGKDGLGSSVGDVLPNVGSSLQPGGSLLPRGDTD 438

Query: 405 ILLKLRMAQFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHSLQQDKI 464
+ + NHS+ Q +
Sbjct: 439 M----LLKLKMALLQQQQQNQQQGGGNPPQPQPQPQPLNQLALTNPQPQSSNHSIHQQEK 494

Query: 465 MGSG---TGDGSMANSFRGNDQASKNQTGRKRKHPVSSSGPANSSGXXXXXXXXXXXXXX 521
+G G T DGS++NSFRGN+Q KNQ+GRKRK PVSSSGPANSSG
Sbjct: 495 LGGGGSITMDGSISNSFRGNEQVLKNQSGRKRKQPVSSSGPANSSGTANTAGPSPSSAPS 554

Query: 522 XXXXXXXGDVISMPVLQHSGSSSKPLMMFGADNNGTLTSPSNQLADMDRFEVDGSLEDNV 581
GDVISMP L HSG SSK +MMFG + GTLTSPSNQLADMDRF DGSL+DNV
Sbjct: 555 TPSTHTPGDVISMPNLPHSGGSSKSMMMFGTEGTGTLTSPSNQLADMDRFVEDGSLDDNV 614

Query: 582 ESFLSQDEVDPRDAVGRGMDVSKGFSFNEVNAVRASSSKVVCCHFSSDGKLLASGGHDKK 641
ESFLSQ++ D RDAV R MDVSKGF+F EVN+VRAS++KV CCHFSSDGK+LAS GHDKK
Sbjct: 615 ESFLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKK 674

Query: 642 AVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTG 701
AVLWYTDT+K KTTLEEH+++ITD+RFSPS RLATSSFDKTVRVWDADN GYSLRTF G
Sbjct: 675 AVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWDADNKGYSLRTFMG 734

Query: 702 HSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVRFQPRIGRYLAA 761
HS+ V SLDFHP K+DLICSCD D EIRYWSINNGSCTRV+KGG+ Q+RFQPR+G+YLAA
Sbjct: 735 HSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYKGGSTQIRFQPRVGKYLAA 794

Query: 762 AAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLASVSEDSVRVWTLRSGSEGDC 821
++ N+V++LDVETQA RHSL+GH PI+SVCWDPSG+ LASVSED V+VWTL +GSEG+C
Sbjct: 795 SSANLVNVLDVETQAIRHSLQGHANPINSVCWDPSGDFLASVSEDMVKVWTLGTGSEGEC 854

Query: 822 LHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTMTLTGHEGLIXXXXXXXX 881
+HELS NGNKF SCVFHPAY SLLVIGCYQSLELWNM+ENKTMTL HEGLI
Sbjct: 855 VHELSCNGNKFQSCVFHPAYPSLLVIGCYQSLELWNMSENKTMTLPAHEGLITSLAVSTA 914

Query: 882 XXXXXXXXHDKFVKLWK 898
HDK VKLWK
Sbjct: 915 TGLVASASHDKLVKLWK 931



Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 85/88 (96%), Positives = 88/88 (100%)

Query: 1 MSQTNWEADKMLDVYIHDYLVKRDLKASAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW 60
MSQTNWEADKMLDVYIHDYLVKRDLKA+AQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW
Sbjct: 1 MSQTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFW 60

Query: 61 DIFIARTNEKHSEVAASYIETQIMKARE 88
DIFIARTNEKHSEVAASYIETQ++KARE
Sbjct: 61 DIFIARTNEKHSEVAASYIETQMIKARE 88

Query: CNT0011364
Subject: sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1

alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=alr3466 PE=3 SV=1

 Score =  133 bits (335), Expect = 2e-30,   Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 143/278 (51%), Gaps = 12/278 (4%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
F+ DG LASG D+ LW ++ K T + H+S + V F+P + LA+ S DKTVR
Sbjct: 1208 FNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVR 1267

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGG 745
+WD + L TF GH+ V S+ F+P+ ++ S GD +R W I++ C F+G
Sbjct: 1268 LWDISSSK-CLHTFQGHTNWVNSVAFNPDGS-MLASGSGDQTVRLWEISSSKCLHTFQGH 1325

Query: 746 T---AQVRFQPRIGRYLAAAAEN-VVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLA 801
T + V F P G LA+ +++ V + + + C ++ GHT + SV + P G +LA
Sbjct: 1326 TSWVSSVTFSPD-GTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILA 1384

Query: 802 SVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNE 860
S S D +VR+W++ S G CL+ L + N S VF P + L Q++ LWN++
Sbjct: 1385 SGSGDQTVRLWSI---SSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISS 1441

Query: 861 NKTM-TLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
+ + TL GH + D+ +KLW
Sbjct: 1442 GECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479



Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 145/293 (49%), Gaps = 10/293 (3%)

Query: 610 EVNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFS 669
E+ + +S V FS DGK+LASG D+ LW + + T + H+S + V FS
Sbjct: 898 ELLTCKGHNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFS 957

Query: 670 PSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIR 729
P+ LA+ S D+TVR+WD + G L F GH+ V S+ F+ + ++ + GD +R
Sbjct: 958 PNSLMLASGSSDQTVRLWDI-SSGECLYIFQGHTGWVYSVAFNLDGS-MLATGSGDQTVR 1015

Query: 730 YWSINNGSCTRVFKGGTAQVR---FQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTK 786
W I++ C +F+G T+ VR F + + + V + D+ + C ++L+GHT
Sbjct: 1016 LWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS 1075

Query: 787 PIHSVCWDPSGELLASVSEDS-VRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLL 845
+ SV + P G +LAS +D VR+W + S G+CL+ L + VF P +L
Sbjct: 1076 CVRSVVFSPDGAMLASGGDDQIVRLWDI---SSGNCLYTLQGYTSWVRFLVFSPNGVTLA 1132

Query: 846 VIGCYQSLELWNMNENKTM-TLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
Q + LW+++ K + TL GH + D+ V+LW
Sbjct: 1133 NGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185



Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 144/300 (48%), Gaps = 14/300 (4%)

Query: 607 SFNEVNAVRASSSK----VVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSL 662
+F E N + +K V+ FS DGKL A+G W T K+ T + H+S
Sbjct: 849 NFTEANLAYSVFTKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSW 908

Query: 663 ITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSC 722
+ V FS LA+ S D+TVR+WD + G L+TF GH++ V S+ F PN ++ S
Sbjct: 909 VNSVGFSQDGKMLASGSDDQTVRLWDI-SSGQCLKTFKGHTSRVRSVVFSPNSL-MLASG 966

Query: 723 DGDGEIRYWSINNGSCTRVFKGGTA---QVRFQPRIGRYLAAAAENVVSILDVETQACRH 779
D +R W I++G C +F+G T V F + + V + D+ + C +
Sbjct: 967 SSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISSSQCFY 1026

Query: 780 SLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFH 838
+GHT + SV + G +LAS S+D +VR+W + S G+CL+ L + + S VF
Sbjct: 1027 IFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDI---SSGNCLYTLQGHTSCVRSVVFS 1083

Query: 839 PAYSSLLVIGCYQSLELWNMNE-NKTMTLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
P + L G Q + LW+++ N TL G+ + D+ V+LW
Sbjct: 1084 PDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLW 1143



Score = 129 bits (324), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 13/309 (4%)

Query: 594 DAVGRGMDVSKGFSFNEVNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQK 653
D + R D+S G N + ++ +S V FS +G LA+G D+ LW + K
Sbjct: 1095 DQIVRLWDISSG---NCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKKCL 1151

Query: 654 TTLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHP 713
TL+ H++ + V FSP A LA+ S D+TVR+WD + L GH++ V S+ F+P
Sbjct: 1152 YTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSK-CLYILQGHTSWVNSVVFNP 1210

Query: 714 NKEDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVR---FQPRIGRYLAAAAENVVSIL 770
+ L S D +R W IN+ C F+G T+ V F P + +++ V +
Sbjct: 1211 DGSTL-ASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLW 1269

Query: 771 DVETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNG 829
D+ + C H+ +GHT ++SV ++P G +LAS S D +VR+W + S CLH +
Sbjct: 1270 DISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEI---SSSKCLHTFQGHT 1326

Query: 830 NKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTM-TLTGHEGLIXXXXXXXXXXXXXXX 888
+ S F P + L Q++ LW+++ + + T GH +
Sbjct: 1327 SWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASG 1386

Query: 889 XHDKFVKLW 897
D+ V+LW
Sbjct: 1387 SGDQTVRLW 1395



Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 149/309 (48%), Gaps = 13/309 (4%)

Query: 594 DAVGRGMDVSKGFSFNEVNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQK 653
D R D+S G N + ++ +S V FS DG +LASGG D+ LW +
Sbjct: 1053 DQTVRLWDISSG---NCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCL 1109

Query: 654 TTLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHP 713
TL+ ++S + + FSP+ LA S D+ VR+WD + L T GH+ V ++ F P
Sbjct: 1110 YTLQGYTSWVRFLVFSPNGVTLANGSSDQIVRLWDISSKK-CLYTLQGHTNWVNAVAFSP 1168

Query: 714 NKEDLICSCDGDGEIRYWSINNGSCTRVFKGGTAQVR---FQPRIGRYLAAAAENVVSIL 770
+ L S GD +R W I++ C + +G T+ V F P + +++ V +
Sbjct: 1169 DGATL-ASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLW 1227

Query: 771 DVETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNG 829
++ + C + +GHT ++SV ++P G +LAS S D +VR+W + S CLH +
Sbjct: 1228 EINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDI---SSSKCLHTFQGHT 1284

Query: 830 NKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTM-TLTGHEGLIXXXXXXXXXXXXXXX 888
N +S F+P S L Q++ LW ++ +K + T GH +
Sbjct: 1285 NWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASG 1344

Query: 889 XHDKFVKLW 897
D+ V+LW
Sbjct: 1345 SDDQTVRLW 1353



Score = 68.6 bits (166), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 63/119 (52%), Gaps = 4/119 (3%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
FS DG +LASG D+ LW + K TL+ H++ + + FSP LA+ S D+TVR
Sbjct: 1376 FSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVR 1435

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGE-IRYWSINNGSCTRVFK 743
+W+ + G L T GH V S+ F + + LI + D E I+ W + G C + K
Sbjct: 1436 LWNI-SSGECLYTLHGHINSVRSVAF--SSDGLILASGSDDETIKLWDVKTGECIKTLK 1491

Query: CNT0011364
Subject: sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein

OS=Podospora anserina GN=HET-E1 PE=3 SV=1

 Score =  122 bits (306), Expect = 5e-27,   Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 129/256 (50%), Gaps = 10/256 (3%)

Query: 619 SKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATS 678
S V+ FS+DG+ +ASG DK +W T + TLE H + V FSP R+A+
Sbjct: 842 SSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASG 901

Query: 679 SFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSC 738
S DKT+++WDA + G +T GH V S+ F P+ + + D D I+ W +G+C
Sbjct: 902 SDDKTIKIWDAAS-GTCTQTLEGHGGRVQSVAFSPDGQRVASGSD-DHTIKIWDAASGTC 959

Query: 739 TRVFKG---GTAQVRFQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDP 795
T+ +G V F P R + + + + I D + C +L+GH + SV + P
Sbjct: 960 TQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP 1019

Query: 796 SGELLASVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLE 854
G+ +AS S+D ++++W SG+ C L +G S VF P + +++
Sbjct: 1020 DGQRVASGSDDKTIKIWDTASGT---CTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIK 1076

Query: 855 LWN-MNENKTMTLTGH 869
+W+ ++ T TL GH
Sbjct: 1077 IWDAVSGTCTQTLEGH 1092



Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 133/283 (46%), Gaps = 10/283 (3%)

Query: 620 KVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSS 679
+V FS DG+ +ASG D +W + TLE H S + V FSP R+A+ S
Sbjct: 927 RVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGS 986

Query: 680 FDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCT 739
DKT+++WD + G +T GH V S+ F P+ + + D D I+ W +G+CT
Sbjct: 987 GDKTIKIWDTAS-GTCTQTLEGHGGSVWSVAFSPDGQRVASGSD-DKTIKIWDTASGTCT 1044

Query: 740 RVFKG--GTAQ-VRFQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPS 796
+ +G G Q V F P R + + ++ + I D + C +L+GH + SV + P
Sbjct: 1045 QTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPD 1104

Query: 797 GELLASVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLEL 855
G+ +AS S D ++++W SG+ C L +G HS F P + ++++
Sbjct: 1105 GQRVASGSIDGTIKIWDAASGT---CTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKI 1161

Query: 856 WNMNENK-TMTLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
W+ T TL GH G + DK +K+W
Sbjct: 1162 WDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIW 1204



Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 10/248 (4%)

Query: 655 TLEEHSSLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPN 714
TLE H S + V FS R+A+ S DKT+++WD + G +T GH V S+ F P+
Sbjct: 836 TLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTAS-GTGTQTLEGHGGSVWSVAFSPD 894

Query: 715 KEDLICSCDGDGEIRYWSINNGSCTRVFK--GGTAQ-VRFQPRIGRYLAAAAENVVSILD 771
+E + D D I+ W +G+CT+ + GG Q V F P R + + ++ + I D
Sbjct: 895 RERVASGSD-DKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWD 953

Query: 772 VETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNGN 830
+ C +L+GH + SV + P G+ +AS S D ++++W SG+ C L +G
Sbjct: 954 AASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGT---CTQTLEGHGG 1010

Query: 831 KFHSCVFHPAYSSLLVIGCYQSLELWNMNENK-TMTLTGHEGLIXXXXXXXXXXXXXXXX 889
S F P + +++++W+ T TL GH G +
Sbjct: 1011 SVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGS 1070

Query: 890 HDKFVKLW 897
D +K+W
Sbjct: 1071 DDHTIKIW 1078



Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 106/210 (50%), Gaps = 15/210 (7%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
FS DG+ +ASG D +W + TLE H + V FSP R+A+ S D T++
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIK 1118

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFK-- 743
+WDA + G +T GH V S+ F P+ + + S DG I+ W +G+CT+ +
Sbjct: 1119 IWDAAS-GTCTQTLEGHGGWVHSVAFSPDGQR-VASGSIDGTIKIWDAASGTCTQTLEGH 1176

Query: 744 GGTAQ-VRFQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLAS 802
GG Q V F P R + +++ + I D + C +L+GH + SV + P G+ +AS
Sbjct: 1177 GGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVAS 1236

Query: 803 VSED-SVRVW---------TLRSGSEGDCL 822
S D ++++W TL GS CL
Sbjct: 1237 GSSDNTIKIWDTASGTCTQTLNVGSTATCL 1266



Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
FS DG+ +ASG DK +W T + TLE H + V FSP R+A+ S D T++
Sbjct: 1185 FSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIK 1244

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDF 711
+WD + + G +A +S D+
Sbjct: 1245 IWDTASGTCTQTLNVGSTATCLSFDY 1270



Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 5/135 (3%)

Query: 765 NVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLH 823
+ +S+++ E AC +L+GH + SV + G+ +AS S+D ++++W SG+
Sbjct: 821 STISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTG---TQ 877

Query: 824 ELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNENK-TMTLTGHEGLIXXXXXXXXX 882
L +G S F P + +++++W+ T TL GH G +
Sbjct: 878 TLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDG 937

Query: 883 XXXXXXXHDKFVKLW 897
D +K+W
Sbjct: 938 QRVASGSDDHTIKIW 952

Query: CNT0011364
Subject: sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA

alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=alr2800 PE=3 SV=1

 Score =  118 bits (296), Expect = 8e-26,   Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 155/338 (45%), Gaps = 27/338 (7%)

Query: 580 NVESFLSQDEVDPRDAVGRGMDVSKGFSFNEVNA--VRASSSKVVCC------------H 625
NV + L +VD G+ V + + VN V ++S + CC
Sbjct: 591 NVLNLLHHAQVDLSGYDFSGLTVWQAY-LQGVNLHDVDFANSDLSCCVFTETLGNILSAA 649

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
FS +G+LLA+ D +W + K HS+ + V FSP LA+ D+ V+
Sbjct: 650 FSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASCGADENVK 709

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGG 745
+W + G ++T TGH V S+ FHP+ E L S GD I+ W I +G+C + G
Sbjct: 710 LWSVRD-GVCIKTLTGHEHEVFSVAFHPDGETL-ASASGDKTIKLWDIQDGTCLQTLTGH 767

Query: 746 TAQVR---FQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLAS 802
T VR F P ++AA++ + + DV C +LK HT + SV + G+ LAS
Sbjct: 768 TDWVRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLAS 827

Query: 803 VSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCY-QSLELWNMNE 860
S D ++++W + G+CL + N +S + P S +LV G ++++LW+
Sbjct: 828 GSGDRTIKIWNYHT---GECLKTYIGHTNSVYSIAYSPD-SKILVSGSGDRTIKLWDCQT 883

Query: 861 NKTM-TLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
+ + TL GH + D+ V+LW
Sbjct: 884 HICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVRLW 921



Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 138/278 (49%), Gaps = 12/278 (4%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
FS D ++LASG +DK LW T K ++LE H+ I + FSP LA++S D +VR
Sbjct: 944 FSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVR 1003

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGG 745
+W+ + G + H+ V ++ FHP + +I + D ++ W+I+ G C +
Sbjct: 1004 LWNI-STGQCFQILLEHTDWVYAVVFHPQGK-IIATGSADCTVKLWNISTGQCLKTLSEH 1061

Query: 746 TAQV---RFQPRIGRYLA-AAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLA 801
+ ++ + P G+ LA A+A+ V + D T C L+GH+ ++S + P+GE++A
Sbjct: 1062 SDKILGMAWSPD-GQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIA 1120

Query: 802 SVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNE 860
+ S D +V++W + +G CL L+ + N F P L Q++ +W++N
Sbjct: 1121 TCSTDQTVKIWDWQ---QGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNT 1177

Query: 861 NKTMTLT-GHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
K + GH L+ D+ V++W
Sbjct: 1178 GKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIW 1215



Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 124/277 (44%), Gaps = 10/277 (3%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
F DG+ LAS DK LW TL H+ + V FSP LA+S+ D T++
Sbjct: 734 FHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLASSAADHTIK 793

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGSCTRVFKGG 745
+WD + G LRT H+ V S+ F + + L S GD I+ W+ + G C + + G
Sbjct: 794 LWDV-SQGKCLRTLKSHTGWVRSVAFSADGQTL-ASGSGDRTIKIWNYHTGECLKTYIGH 851

Query: 746 TAQVR---FQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLAS 802
T V + P ++ + + + + D +T C +L GHT + SV + P G+ LA
Sbjct: 852 TNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLAC 911

Query: 803 VSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNEN 861
VS D SVR+W R+ G CL N + F P L ++++LW+
Sbjct: 912 VSLDQSVRLWNCRT---GQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTG 968

Query: 862 KTM-TLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
K + +L GH I D V+LW
Sbjct: 969 KYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW 1005



Score = 111 bits (277), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 52/319 (16%)

Query: 626 FSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSFDKTVR 685
+S D K+L SG D+ LW T TL H++ + V FSP LA S D++VR
Sbjct: 860 YSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVSLDQSVR 919

Query: 686 VWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDL-------------------ICSCDG-- 724
+W+ G L+ + G++ + + F P+++ L I S +G
Sbjct: 920 LWNC-RTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLWDWQTGKYISSLEGHT 978

Query: 725 --------------------DGEIRYWSINNGSCTRVFKGGT---AQVRFQPRIGRYLAA 761
D +R W+I+ G C ++ T V F P+ G+ +A
Sbjct: 979 DFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQ-GKIIAT 1037

Query: 762 -AAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEG 819
+A+ V + ++ T C +L H+ I + W P G+LLAS S D SVR+W +G
Sbjct: 1038 GSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTGR-- 1095

Query: 820 DCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTM-TLTGHEGLIXXXXX 878
C+ L + N+ +S +F P + Q++++W+ + K + TLTGH +
Sbjct: 1096 -CVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAF 1154

Query: 879 XXXXXXXXXXXHDKFVKLW 897
HD+ V++W
Sbjct: 1155 SPDGKILASASHDQTVRIW 1173



Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 128/288 (44%), Gaps = 10/288 (3%)

Query: 615 RASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMAR 674
R S+ V FS DG++LAS G D+ LW TL H + V F P
Sbjct: 681 RGHSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGET 740

Query: 675 LATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSIN 734
LA++S DKT+++WD + G L+T TGH+ V + F P+ L S D I+ W ++
Sbjct: 741 LASASGDKTIKLWDIQD-GTCLQTLTGHTDWVRCVAFSPDGNTLASSA-ADHTIKLWDVS 798

Query: 735 NGSCTRVFKGGTAQVR---FQPRIGRYLAAAAENVVSILDVETQACRHSLKGHTKPIHSV 791
G C R K T VR F + + + + I + T C + GHT ++S+
Sbjct: 799 QGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSI 858

Query: 792 CWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCY 850
+ P ++L S S D ++++W ++ C+ L + N+ S F P +L +
Sbjct: 859 AYSPDSKILVSGSGDRTIKLWDCQTHI---CIKTLHGHTNEVCSVAFSPDGQTLACVSLD 915

Query: 851 QSLELWNMNENKTM-TLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
QS+ LWN + + G+ +DK VKLW
Sbjct: 916 QSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQILASGSNDKTVKLW 963



Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 50/323 (15%)

Query: 621 VVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLATSSF 680
V C FS DG LAS D LW K TL+ H+ + V FS LA+ S
Sbjct: 771 VRCVAFSPDGNTLASSAADHTIKLWDVSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSG 830

Query: 681 DKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDL---------------------- 718
D+T+++W+ + G L+T+ GH+ V S+ + P+ + L
Sbjct: 831 DRTIKIWNY-HTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKT 889

Query: 719 -------ICSC----DG--------DGEIRYWSINNGSCTRVFKGGT---AQVRFQPRIG 756
+CS DG D +R W+ G C + + G T V F P
Sbjct: 890 LHGHTNEVCSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWALPVAFSPDRQ 949

Query: 757 RYLAAAAENVVSILDVETQACRHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRS 815
+ + + V + D +T SL+GHT I+ + + P + LAS S D SVR+W +
Sbjct: 950 ILASGSNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNI-- 1007

Query: 816 GSEGDCLHELSSNGNKFHSCVFHPAYSSLLVIGCYQSLELWNMNENKTM-TLTGHEGLIX 874
S G C L + + ++ VFHP + +++LWN++ + + TL+ H I
Sbjct: 1008 -STGQCFQILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKIL 1066

Query: 875 XXXXXXXXXXXXXXXHDKFVKLW 897
D+ V+LW
Sbjct: 1067 GMAWSPDGQLLASASADQSVRLW 1089



Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 7/170 (4%)

Query: 618 SSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSPSMARLAT 677
S K++ +S DG+LLAS D+ LW T + L HS+ + FSP+ +AT
Sbjct: 1062 SDKILGMAWSPDGQLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIAT 1121

Query: 678 SSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRYWSINNGS 737
S D+TV++WD G L+T TGH+ V + F P+ + ++ S D +R W +N G
Sbjct: 1122 CSTDQTVKIWDWQQ-GKCLKTLTGHTNWVFDIAFSPDGK-ILASASHDQTVRIWDVNTGK 1179

Query: 738 CTRVFKGGT---AQVRFQPRIGRYLAAAAEN-VVSILDVETQACRHSLKG 783
C + G T + V F P G +A+ +++ V I +V+T C L+
Sbjct: 1180 CHHICIGHTHLVSSVAFSPD-GEVVASGSQDQTVRIWNVKTGECLQILRA 1228



Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 611 VNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDVRFSP 670
V +R S++V FS +G+++A+ D+ +W K TL H++ + D+ FSP
Sbjct: 1097 VGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSP 1156

Query: 671 SMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDGEIRY 730
LA++S D+TVR+WD N G GH+ V S+ F P+ E ++ S D +R
Sbjct: 1157 DGKILASASHDQTVRIWDV-NTGKCHHICIGHTHLVSSVAFSPDGE-VVASGSQDQTVRI 1214

Query: 731 WSINNGSCTRVFKG 744
W++ G C ++ +
Sbjct: 1215 WNVKTGECLQILRA 1228

Query: CNT0011364
Subject: sp|O22212|PRP4L_ARATH U4/U6 small nuclear ribonucleoprotein

OS=Thermomonospora curvata GN=pkwA PE=3 SV=1

 Score =  114 bits (285), Expect = 1e-24,   Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 13/262 (4%)

Query: 601 DVSKGFSFNEVNAVRASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHS 660
DV+ G +E++ + + V FS DG LLASG D LW +++ E H+
Sbjct: 487 DVASG---DELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHT 543

Query: 661 SLITDVRFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLIC 720
+ D+ FSP + +A+ S D T R+W+ G GH+ V ++ F P+ ++
Sbjct: 544 HYVLDIAFSPDGSMVASGSRDGTARLWNVAT-GTEHAVLKGHTDYVYAVAFSPDGS-MVA 601

Query: 721 SCDGDGEIRYWSINNGSCTRVFKGGTAQV---RFQPRIGRYLAAAAENVVSILDVETQAC 777
S DG IR W + G V + V F P G L +++ V + DV +
Sbjct: 602 SGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPD-GSMLVHGSDSTVHLWDVASGEA 660

Query: 778 RHSLKGHTKPIHSVCWDPSGELLASVSED-SVRVWTLRSGSEGDCLHELSSNGNKFHSCV 836
H+ +GHT + +V + P G LLAS S+D ++R+W + + E L + HS
Sbjct: 661 LHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLE---GHTEPVHSVA 717

Query: 837 FHPAYSSLLVIGCYQSLELWNM 858
FHP ++L ++ +W +
Sbjct: 718 FHPEGTTLASASEDGTIRIWPI 739



Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 129/295 (43%), Gaps = 11/295 (3%)

Query: 609 NEVNAVR--ASSSKVVCCHFSSDGKLLASGGHDKKAVLWYTDTLKQKTTLEEHSSLITDV 666
+E+N R + + V FS G LLA G DK +W + + TLE H+ + V
Sbjct: 448 HELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEGHTDWVRAV 507

Query: 667 RFSPSMARLATSSFDKTVRVWDADNPGYSLRTFTGHSAGVMSLDFHPNKEDLICSCDGDG 726
FSP A LA+ S D TVR+WD F GH+ V+ + F P+ ++ S DG
Sbjct: 508 AFSPDGALLASGSDDATVRLWDVAA-AEERAVFEGHTHYVLDIAFSPDGS-MVASGSRDG 565

Query: 727 EIRYWSINNGSCTRVFKGGT---AQVRFQPRIGRYLAAAAENVVSILDVETQACRHSLKG 783
R W++ G+ V KG T V F P + + + + + DV T R L+
Sbjct: 566 TARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQA 625

Query: 784 HTKPIHSVCWDPSGELLASVSEDSVRVWTLRSGSEGDCLHELSSNGNKFHSCVFHPAYSS 843
+ + S+ + P G +L S+ +V +W + S G+ LH + + + F P +
Sbjct: 626 PAENVVSLAFSPDGSMLVHGSDSTVHLWDVAS---GEALHTFEGHTDWVRAVAFSPDGAL 682

Query: 844 LLVIGCYQSLELWNM-NENKTMTLTGHEGLIXXXXXXXXXXXXXXXXHDKFVKLW 897
L +++ LW++ + + TL GH + D +++W
Sbjct: 683 LASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDGTIRIW 737