Query: CNT0001834
Subject: sp|Q8H0T4|UPL2_ARATH E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis

thaliana GN=UPL1 PE=1 SV=3

 Score = 1126 bits (2912), Expect = 0.0,   Method: Compositional matrix adjust.
Identities = 675/1378 (48%), Positives = 847/1378 (61%), Gaps = 90/1378 (6%)

Query: 2324 VGLDNIFRSLRSGRHGHRLHLWTDNNQQSGGTNTAVVPQGLEELLVTQLRRPTP-----E 2378
VG+D S R G WTD + +A + Q +EE ++ LR P E
Sbjct: 2345 VGMD-------SSRRGVGDSRWTDIGHPQPSSLSASIAQLIEEHFISNLRASAPVNTVVE 2397

Query: 2379 KSSNQNIAEAGSH---------------GKIGTTQAQDAGGAR--------PEVPVESNA 2415
+ +N + H G G Q+++ P+V ES A
Sbjct: 2398 RETNTTEIQEQLHPDVPPSVGSETVLGDGNEGGQQSEERELLNNNENVNNPPDVMAESFA 2457

Query: 2416 ILEISTITPSIDNSNNADVRPAGTGPSHTNVSNTQSRAVEMQFEHTDGAVRDI---EAVS 2472
+ + +P ++ + + P N +T + M+ DGA D EAV
Sbjct: 2458 QGQANLASPVSQDTGESLQQLEVMQPLPLN--STPNEIDRMEVGEGDGAPIDQVDHEAVH 2515

Query: 2473 QESSGSGATFGESLRSLEVEIGSADGHDDGGERLVSADRMAGDSQAARTRRANTPLSHFS 2532
S+ G S++++ V A DD + + S A ++ P S
Sbjct: 2516 LISTAQGQPDTSSIQNVSV-TAIAPPVDDPDSNFQPSVDVDMSSDGAEGNQSVQP----S 2570

Query: 2533 PVVGRDVSLHSVTEVSENSSRDADQQGPAAEQQVNSDAGSG------AIDPAFLDALPEE 2586
P+ G + L S+ E +EN D +QV + G AIDP FL+ALPE+
Sbjct: 2571 PLDGDNNELSSM-EATENVRND---------EQVEEGSLDGRAPEVNAIDPTFLEALPED 2620

Query: 2587 LRAEVLSAQQGQVAQPSNVESQNTGDIDPEFLAALPADIRAEVXXXXXXXXXXXXXELEG 2646
LRAEVL++QQ Q QP E DIDPEFLAALP DI+ EV + +G
Sbjct: 2621 LRAEVLASQQAQSVQPPTYEPPPVDDIDPEFLAALPPDIQTEV--LAQQRAQRMVQQSQG 2678

Query: 2647 QPVEMDTVSIIATFPSDLREEVLLTSPDTILANLTPALVAEANMLRER-FAHRYSR-TLF 2704
Q V+MD SIIAT P+DLREEVLLTS + +LA L L+AEA MLR+R +H +R ++F
Sbjct: 2679 QAVDMDNASIIATLPADLREEVLLTSSEAVLAALPSPLLAEAQMLRDRAMSHYQARSSVF 2738

Query: 2705 GMYPXXXXXXXXXXXXXXXXLD-GAGGTISSRRSS----GVKVVEADGAPLVDTEALHAM 2759
G +D G G TI R S G+KV E +G PLV+ +AL ++
Sbjct: 2739 GSSHRLNNRRNGLGYNRLTGMDRGVGVTIGQRAVSSSADGLKVKEIEGDPLVNADALKSL 2798

Query: 2760 IRLFRVVQPLYKGQLQRLLLNLCAHSETRTSLVKILMDLLMLDVKRPVSYFSKVEPPYRL 2819
IRL R+ QPL KG LQRLLLNLCAHS TR +LV++L+D++ +++ S + + P RL
Sbjct: 2799 IRLLRLAQPLGKGLLQRLLLNLCAHSFTRANLVQLLLDMIRPEMETSPSELA-ITNPQRL 2857

Query: 2820 YGCQSNVMYSRPQSFDGVPPLLSRRILGILTYLARNHLYVAKFLLQCRLSHPAIKEPDDP 2879
YGCQSNV+Y R Q +G+PPL+ RR+L +LTYLA NH VA L + +
Sbjct: 2858 YGCQSNVVYGRSQLLNGLPPLVFRRVLEVLTYLATNHSAVADMLFY--FDSSLLSQLSSR 2915

Query: 2880 RGKAVMVVEDEVNISESNDGYIAIAMLLGLLNQPLYLRSIAHLEQLLDLLDVIIDSAGNK 2939
+GK E ++++S D I + + L LLN+P L+S +HL ++ LL V++ +A ++
Sbjct: 2916 KGK-----EKVTHVTDSRDLEIPLVVFLKLLNRPQLLQSTSHLGLVMGLLQVVVYTAASR 2970

Query: 2940 SSGKSLIPTNPSSAPQIXXXXXXXXXXXXXLPSADDASKVDGSSKPTVSGINVECELHGV 2999
G S PSS D S++ G + +V+ E++ +
Sbjct: 2971 IEGWS-----PSSGVPEKLENKPVGEEASSETRKDAESELVGEADLSVARRKNCAEIYNI 3025

Query: 3000 LSNLPKAELRLLCSLLAQEGLSDNAYNLVAEVMKKLVAIAPTHCELFVTELAEAVQKLTS 3059
LP+++L LC LL EGLSD Y+L EV+KKL A+ H + F EL+E L+S
Sbjct: 3026 FLQLPQSDLCNLCILLGYEGLSDKIYSLAGEVLKKLAAVDVAHRKFFTKELSELASSLSS 3085

Query: 3060 SAMNELRVFSEAMKALLSTSSTDGAAILRVLQALSSLVTLLTEKE----NDRGTPALSEV 3115
S + EL S K ST S GA+ILRVLQ LSSL + + E + + +
Sbjct: 3086 STVRELATLSSKQKMSRSTGSMAGASILRVLQVLSSLTSPIDESNVGTERETEQEEQNIM 3145

Query: 3116 WEINSALEPLWHELSCCISKIEXXXXXXXXXXXXXXXXXXXXXGVMPPLPAGSQNILPYI 3175
+N ALEPLWHELS CIS E L G+Q +LP I
Sbjct: 3146 QRLNVALEPLWHELSQCISMTELQLDHTAAASNINPGDHVLGISPTSSLSPGTQRLLPLI 3205

Query: 3176 ESFFVVCEKLHPAQPGASHDSSIPVISDVEYATTSVTPQKASGTAVKVDEKHMPFVRFSE 3235
E+FFV+CEK+ P + +V+ ++ + K S + K + + F +F+E
Sbjct: 3206 EAFFVLCEKIQ--TPSMLQQDTNVTAGEVKESSAHGSSSKTSVDSQKKTDGSVTFSKFAE 3263

Query: 3236 KHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRAHFRSKIKHQHDHHHS-PLRISV 3294
KHR+LLN+FIRQNP LLEKS S+MLK PR IDFDNK+A+FRS+I+HQHD H S PLRISV
Sbjct: 3264 KHRRLLNSFIRQNPSLLEKSLSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISV 3323

Query: 3295 RRAYVLEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF 3354
RRAYVLEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLF
Sbjct: 3324 RRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLF 3383

Query: 3355 TTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVT 3414
TTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVT
Sbjct: 3384 TTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVT 3443

Query: 3415 YHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERTEVTDYELIPGGRNI 3474
YHDIEA+DPDY+KNLKW+LEND+SD+LDLTFS+DADEEK ILYE+TEVTDYEL PGGRNI
Sbjct: 3444 YHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNI 3503

Query: 3475 KVTEENKHQYVDLVAEHRLTTAIRPQINYFLEGFIELIPRELISIFNDKELELLISGLPD 3534
+VTEE KH+YVDLVA H LT AIRPQIN FLEGF ELIPREL+SIFNDKELELLISGLP+
Sbjct: 3504 RVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVSIFNDKELELLISGLPE 3563

Query: 3535 IDLDDLRANTEYSGYSAASPVIQWFWEVVQGLSKEDKARLLQFVTGTSKVPLEGFSALQG 3594
ID DDL+ANTEY+ Y+A SPVI WFWEVV+ SKED AR LQFVTGTSKVPLEGF ALQG
Sbjct: 3564 IDFDDLKANTEYTSYTAGSPVIHWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQG 3623

Query: 3595 ISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEASEGFGFG 3652
ISG Q+ QIHKAYG+P+ LPSAHTCFNQLDLPEY SK+ L+ERLLLAIHEASEGFGF
Sbjct: 3624 ISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERLLLAIHEASEGFGFA 3681



Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 682/2080 (32%), Positives = 1059/2080 (50%), Gaps = 151/2080 (7%)

Query: 30 TEPPPMVKAFIEKIIQCPLQDIAIPLSGFRWEYNKGNFHHWRLLLLHFDTYFKTYLSCRX 89
+E P +K+FI + PL+ I PL+ FRWE++KG+FHHW L +FDT+F+ ++ R
Sbjct: 9 SEVPSKIKSFINSVTSVPLELIHEPLACFRWEFDKGDFHHWVDLFNYFDTFFEKHVQVRK 68

Query: 90 XXXXXXXXXXXSP-LPKHAXXXXXXXXXXXXENCPNKSSFDGLE-HFKLLLASTDPEILI 147
P PK A ENC NK + E H LLLASTD +++
Sbjct: 69 DLHIEENFEESDPPFPKDAVLQVLRVIRVVLENCTNKHFYSSYEQHLSLLLASTDADVVE 128

Query: 148 ATLETLSALVKINPSKLHGSTKMICCGSVNSYLLSLAQGWGSKEEGLGLYSCVMANEKVQ 207
A L+TL+A +K K I S+NS L SLAQGWG KEEGLGL SC N
Sbjct: 129 ACLQTLAAFLKRQIGKYS-----IRDASLNSKLFSLAQGWGGKEEGLGLTSCAAENS--- 180

Query: 208 DEALCLFPSEEIGHDQSNCRMGTTLYFELHGPSAQSKEHSADAVSPGSTVIHMPDLHLRK 267
C DQ + ++G TL+FE + PS + S + G VIH+PD+ +
Sbjct: 181 ----C---------DQVSLQLGRTLHFEFY-PS----DESPSELPGGLQVIHVPDVSICA 222

Query: 268 EDDLSLMKQCIEQFSVPSELRFSLLTRIRYARAFRSPRICRLYSRICLLSFIVLVQSGDA 327
E DL L+ + + +VP LRF+LLTR+R+ARAF S + ++ I L +F+VLVQ+
Sbjct: 223 ESDLELLNKLVIDHNVPPSLRFALLTRMRFARAFSSLATRQQFTCIRLYAFVVLVQASGD 282

Query: 328 QEELVSFFANEPEYTNELIRIVRSEEVISGSIRTXXXXXXXXXXXXYTSSHHRARILSGS 387
E +VSFF EPE+ NEL+ +V E+ + IR S R R +
Sbjct: 283 TENVVSFFNGEPEFVNELVTLVSYEDTVPEKIRILCLLSLVAL------SQDRTRQPTVL 336

Query: 388 SLTFAGGNRMILLNVLQRAILSLKSSNDPSSLAFVEALLQFYLLHVVSTSTSGNNIRGSG 447
+ +GG+R +L ++Q+AI S+ SLAF EALL + +VS+S+ + +R +G
Sbjct: 337 TAVTSGGHRGLLSGLMQKAIDSVVCITSKWSLAFAEALLSLVTV-LVSSSSGCSAMREAG 395

Query: 448 MVPTFLPLLEDFDPTHIHLVCFAVKTLQKLMDYSSSAVSLFKELGGIELLAQRLQKEVHR 507
++PT +PL++D DP H+HLV AV L+ MDYS+ A +LF++LGG++ RL+ EV R
Sbjct: 396 LIPTLVPLIKDTDPQHLHLVSAAVHILEAFMDYSNPAAALFRDLGGLDDTIFRLKLEVSR 455

Query: 508 VIGLVGE----TDNIMLTGESLRYSTDQL-YSQKRLIKVSLKALGSATYAPANSTRSQHS 562
V E +D+ E L YS + Y ++ L+K L+A+ TYAP N T S
Sbjct: 456 TEDDVKEKNCSSDSNGPDTEQLPYSEALISYHRRLLLKALLRAISLGTYAPGN-TNLYGS 514

Query: 563 QDSSLPVTLRLIFQNVDKFGGDIYYSAVTVMSEIIHKDPTCFSALHEMGLPDAFLLSVGS 622
++S LP L +IF+ FGG ++ A TVMS++IHKDPTCF+AL GL FL ++
Sbjct: 515 EESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFNALDSAGLTSTFLDAISD 574

Query: 623 EILPSSKALTCIPNGLGAICLNAKGLEAVRESSSLRFLIDIFTSKKYILAMN-EAIVPLA 681
E++ S++A+TCIP L A+CLN GL+AV++ ++LR + IFTS Y+ A+ + L+
Sbjct: 575 EVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFTSPSYLRALTGDTPGSLS 634

Query: 682 NAVEELLRHVSTLRSSSVDIIIEIIHKIASFGDGNGTGFSGKAE------GTAMETDSEN 735
+ ++ELLRH S+LR+ VD+ IEI++ + G G S A+ ME D +
Sbjct: 635 SGLDELLRHQSSLRTYGVDMFIEILNSMLIIGSGMEATTSKSADVPTSAAPVPMEIDVDE 694

Query: 736 KEKEGHCCIVGTSYSAIEGISDEQFIQLCVFHLMVLIHRTMENAETCRLFVEKSGIEALL 795
K +S ++ I E F+ CV ++ L ++NAE C LFVEK GI+A+L
Sbjct: 695 KSLAVSDEAEPSSDTSPANI--ELFLPDCVCNVARLFETVLQNAEVCSLFVEKKGIDAVL 752

Query: 796 NLLLRPTIAQSSDGMSIALHSTMVFKGFAQHHSIPLAHAFCSSLREHXXXXXXXXXXXSE 855
L P + S+ S+ ++ FK F+ HS LA CS LREH
Sbjct: 753 QLFSLPLMPLST---SLGQSFSVAFKNFSPQHSAGLARIVCSYLREHLKKTKILLVSIEG 809

Query: 856 PLLLDPRMTTDGAIXXXXXXXXXXXXXAAPKDN---RWVTALLTEFGNGGKDVLEDIGRV 912
LL + AI N + ++++E DVL+++G
Sbjct: 810 TQLL----KLESAIQTKILRSLSCLEGMLSLSNFLLKGSASVISELSAADADVLKELGIT 865

Query: 913 HREVLWQIALLENRKPEIEED---GACTSDLQQAEGDASETEEQRLNSFR-QFLDPL--- 965
+++ +WQ+AL + K + ++ G+ S + E++E N+ ++ +P+
Sbjct: 866 YKQTIWQMALCNDTKEDEKKSVDRGSDNSVSASSSTAERESDEDSSNALAVRYTNPVSIR 925

Query: 966 LRRRTSGWSIESQFFNLINLYRDLGRSTGSQHRSNLVGPRXXXXXXXXXXXXDDNSGTAD 1025
S W + +F +++ G + R + R D+ AD
Sbjct: 926 SSSSQSIWGGDREFLSIVR----SGEGIHGRTRHAIARMRGGRTRRHLESFNFDSEIPAD 981

Query: 1026 KKESD-----KQRPYYTSCCDMVRSLSFHITHLFQELGKVMLLPSRRRDDVVNVSPASKS 1080
+ K++ +++ L+ + F L K +RRR D ++S ASK+
Sbjct: 982 LPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTALVKGFTSANRRRIDGASLSSASKT 1041

Query: 1081 VASTFASIAFDHMNYGGRCVNLSGTEESISTKCRYFGKVIDFMDNVLME-RPDSCNPIML 1139
+ + A + + +N+ G +G E+S+S KCRY GKV+D + + + R C M+
Sbjct: 1042 LGTALAKVFLEALNFDGYGAA-AGHEKSLSVKCRYLGKVVDDITFLSFDTRRRVCFTAMV 1100

Query: 1140 NCLYGRGVIETVLTTFEATSQLLFTVNRAPASPMDTDDANAKQDDKEDTDNS-WIYGSLA 1198
N Y G + +LTTFEATSQLL+TV P S + N K ++ +S W+ +L
Sbjct: 1101 NSFYVHGTFKELLTTFEATSQLLWTV---PFSIPASSTENEKPGERNIWSHSKWLVDTLQ 1157

Query: 1199 SYGKLMDHLVTSSFILSSFTK-HLLAQP----LTNGNTAFPRDAETFVKVLQSRVLKTVL 1253
+Y + +D+ V S+++LS ++ LL QP L+ G PR+ ETFV+ LQS+VL +L
Sbjct: 1158 NYCRALDYFVNSTYLLSPTSQTQLLVQPASVGLSIGLFPVPREPETFVRNLQSQVLDVIL 1217

Query: 1254 PVWTHPQFVDCSYEFISTVISIIRHVYTGVEVKNVNGSGGARITGPPP-----NETTIST 1308
P+W HP F DC+ F+++V S++ H+Y+GV N SG R +E+ +
Sbjct: 1218 PIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDARENRSGVTRGINQRALPLQLDESIVGM 1277

Query: 1309 IVEMGFSRSRAEEALRQVGSNSVELAMEWLFSHPEE-IQEDDELARALAMSLGNSESDAK 1367
IVEMGFSRSRAE ALR+VG+NSVE+AM+WLF++PE+ +QEDDELA+ALA+SLGNS K
Sbjct: 1278 IVEMGFSRSRAEIALRRVGTNSVEMAMDWLFTNPEQPVQEDDELAQALALSLGNSSETPK 1337

Query: 1368 -DAVANDNALQLEEEMVLLPPVDELLSTCTKLL-SKEPLAFPVRDLLVMICSHDDGHHRS 1425
+ + EE PPVDE+++ KL S + +AFP+ DL V +C+ + G R
Sbjct: 1338 LEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSMAFPLMDLFVTLCNRNKGEDRP 1397

Query: 1426 NVVSFIVERIKECGLVPSNGNVATLAALFHVLALILNEDAVAREAASTSGLIKIASDLLY 1485
+VS++++++K L S + L + H+LAL+L+ED RE A+ G++ +A +L
Sbjct: 1398 KIVSYLIQQLKLVQLDFSK-DTGALTMIPHILALVLSEDDNTREIAAQDGIVTVAIGILT 1456

Query: 1486 QWDSSLDSREKQQVPKWVTAAFLALDRLLQVDQKLNSEIAE-------------QLKKEA 1532
++ +S + PK ++A L L +LQ KL+SE E Q A
Sbjct: 1457 DFNLKSESETEILAPKCISALLLVLSMMLQAQTKLSSEYVEGNQGGSLVPSDSPQDSTAA 1516

Query: 1533 VNSQQTSITIDEDRQNKLQSALGLSMKYADIHEQKRLVEVACSCMNNQLPSDTMHAILLL 1592
+ +S + L+ G S Y + E + + +AC + +P+ M A+L L
Sbjct: 1517 LKDALSSDVAKGESNQALELIFGKSTGYLTMEEGHKALLIACGLIKQHVPAMIMQAVLQL 1576

Query: 1593 CSNLTRNHSVAXXXXXXXXXXXXXXXXXXXXXXXXDNVAASIVRHVLEDPQTLQQAMESE 1652
C+ LT++H++A D VA+ IVRH++EDPQTLQ AME+E
Sbjct: 1577 CARLTKSHALAIQFLENGGLSSLFNLPKKCCFPGYDTVASVIVRHLVEDPQTLQIAMETE 1636

Query: 1653 IKHSLAVASNRHPNGRVNPHNFLLNLASVIYRDPVIFMLAAQSVCQVEMVGERPYIVLLX 1712
I+ +L + RH GRV P FL +A VI RDPV+FM A S CQ+E G R +++L
Sbjct: 1637 IRQTL--SGKRHI-GRVLPRTFLTTMAPVISRDPVVFMKAVASTCQLESSGGRDFVIL-- 1691

Query: 1713 XXXXXXXXXXXXXXXXXXXXXXVQNSDGKVVLGNTNTAPTGNGHGKIQDSNTKSAKGHRK 1772
V S+ G + P G K+ D + K +K HR+
Sbjct: 1692 --------------SKEKEKPKVSGSEH----GFSLNEPLGISENKLHDVSGKCSKSHRR 1733

Query: 1773 PNQSFINVIELLLESICTFVPPLK--DDIASNVLPGTPASTDMDIDXXXXXXXXXXXXXX 1830
+FI VI+ L++ + +F P +K +D +N++ +
Sbjct: 1734 VPANFIQVIDQLIDLVLSF-PRVKRQEDGETNLISMEVDEPTTKVKGKSKVGEPEKASSS 1792

Query: 1831 XDGNETGSQVASAS--LAKIVFIXXXXXXXXXXXXXXXXXXXRRDAEISCIRGSYQKSPA 1888
G +++ S LA++ FI RRD EIS +RGS +
Sbjct: 1793 RVGEPEKAEIPEKSEELARVTFILKLLSDIVLMYSHGTSVILRRDTEISQLRGSNLPDDS 1852

Query: 1889 GLSMGWIFSHILHNFLPYSRNSKKDKKADGDWRQKLATRANQFIVGACVRSTEARKRVFG 1948
+ G I+ H++H LP S + +W++KL+ +A+ F+V C RS E RKR+
Sbjct: 1853 PGNGGLIY-HVIHRLLPISLEKFVGPE---EWKEKLSEKASWFLVVLCSRSNEGRKRIIN 1908

Query: 1949 EISYIINEFV----DSCHDIKRPGNEIQVFVDLLNDVLAARTPA------GSYISAEAST 1998
E+S +++ F S + P + F +L+ +L + + G S + +
Sbjct: 1909 ELSRVLSVFASLGRSSSKSVLLPDKRVLAFANLVYSILTKNSSSSSSNFPGCGCSPDVAK 1968

Query: 1999 TFIDAGLVKSFTCTLQVLDLDHAGSSEVATGIIKALELVT 2038
+ +D G ++ T L V+DLDH + ++ T I+K+LE +T
Sbjct: 1969 SMMDGGTIQCLTSILHVIDLDHPDAPKLVTLILKSLETLT 2008

Query: CNT0001834
Subject: sp|Q9P4Z1|TOM1_NEUCR E3 ubiquitin-protein ligase TOM1-like

thaliana GN=UPL2 PE=1 SV=3

 Score = 1121 bits (2900), Expect = 0.0,   Method: Compositional matrix adjust.
Identities = 666/1364 (48%), Positives = 834/1364 (61%), Gaps = 105/1364 (7%)

Query: 2324 VGLDNIFRSLRSGRHGHRLHLWTDNNQQSGGTNTAVVPQGLEELLVTQLRRPTPEKSSNQ 2383
VG+D+ R + R WTD + +A + Q +EE +T LR P + +
Sbjct: 2365 VGMDSSRRGVGDSR-------WTDVGHPQPSSLSASIAQLIEEHFITNLRASAPVDTVVE 2417

Query: 2384 NIAEAGSHGKIGTTQAQDAGGARPEVP--VESNAILEISTITPSIDNSNNADVRPAGTGP 2441
+ TT+ Q+ +P+VP V S +L D G
Sbjct: 2418 R--------ETNTTEVQEQ--QQPDVPPSVGSETVL--------------GDGNEGGEQS 2453

Query: 2442 SHTNVSNTQSRAVEMQFEHTDGAVRDIEAVSQESSGSGATFGESLRSLEVEIGSADGHDD 2501
+ N + T + +E G GA + R I SA G D
Sbjct: 2454 EEHELLNNNEVMHPLPLNSTPNEIDRMEV----GEGGGAPIEQVDREAVHLISSAQGQSD 2509

Query: 2502 GGERLVSADRMAGDSQAARTRRANTPLSHFSPVVGRDVSLHSV--TEVSENSSRDADQ-- 2557
+ S A + P S+F P V D+S + + S D D
Sbjct: 2510 -------TSGIQNVSVTAIPPPVDDPDSNFQPSVDVDMSSDGAEGNQSVQPSPLDGDNNE 2562

Query: 2558 -------QGPAAEQQVNSDAGSG------AIDPAFLDALPEELRAEVLSAQQGQVAQPSN 2604
Q ++QV+ + G AIDP FL+ALPE+LRAEVL++QQ Q QP
Sbjct: 2563 LSSMEATQDVRNDEQVDEGSLDGRAPEVNAIDPTFLEALPEDLRAEVLASQQAQSVQPPT 2622

Query: 2605 VESQNTGDIDPEFLAALPADIRAEVXXXXXXXXXXXXXELEGQPVEMDTVSIIATFPSDL 2664
E + DIDPEFLAALP +I+ EV + GQPV+MD SIIAT P+DL
Sbjct: 2623 YEPPSVDDIDPEFLAALPPEIQREVLAQQRAQRMLQQSQ--GQPVDMDNASIIATLPADL 2680

Query: 2665 REEVLLTSPDTILANLTPALVAEANMLRERFAHRYS--RTLFGMYPXXXXXXXXXXXXXX 2722
REEVLLTS + +LA L P L+AEA MLR+R Y +FG
Sbjct: 2681 REEVLLTSSEAVLAALPPPLLAEAQMLRDRAMRHYQARSRVFGSSHRLNNRRNGLGYRLT 2740

Query: 2723 XXLDGAGGTISSRRSS----GVKVVEADGAPLVDTEALHAMIRLFRVVQPLYKGQLQRLL 2778
G G TI R S G+KV E +G PLV+ +AL ++IRL R+ QPL KG LQRLL
Sbjct: 2741 GMERGVGVTIGQRDVSSSADGLKVKEIEGDPLVNADALKSLIRLLRLAQPLGKGLLQRLL 2800

Query: 2779 LNLCAHSETRTSLVKILMDLLMLDVKRPVSYFSKVEPPYRLYGCQSNVMYSRPQSFDGVP 2838
LNLCAHS TR +LV++L+D++ +++ S + + P RLYGCQ NV+Y R Q +G+P
Sbjct: 2801 LNLCAHSFTRANLVQLLLDMIRPEMETLPSELA-LTNPQRLYGCQLNVVYGRSQLLNGLP 2859

Query: 2839 PLLSRRILGILTYLARNHLYVAKFLLQCRLSHPAIKEPDDPRGKAVMVVEDEVNISESND 2898
PL+ RR+L +LTYLA NH VA L + + +GK + E ++S D
Sbjct: 2860 PLVFRRVLEVLTYLATNHSAVADMLFY--FDSSLLSQLSSRKGKEKVTHE-----TDSRD 2912

Query: 2899 GYIAIAMLLGLLNQPLYLRSIAHLEQLLDLLDVIIDSAGNKSSGKSLIPTNPSSAPQIXX 2958
I + + L LLN+P L+S +HL ++ LL V++ +A ++ G S PSS
Sbjct: 2913 LEIPLVVFLKLLNRPQLLQSTSHLALVMGLLQVVVYTAASRIEGWS-----PSSG----- 2962

Query: 2959 XXXXXXXXXXXLPSADDAS---KVDGSSKPTVSGINVECELHGVLSNLPKAELRLLCSLL 3015
P ++AS + D S+ +V+ EL+ + LP+++L LC LL
Sbjct: 2963 ----VPEKLENKPVGEEASSETQKDAESELSVARRKNCAELYNIFLQLPQSDLCNLCMLL 3018

Query: 3016 AQEGLSDNAYNLVAEVMKKLVAIAPTHCELFVTELAEAVQKLTSSAMNELRVFSEAMKAL 3075
EGLSD Y+L EV+KKL A+ TH + F EL+E L+SS + L S K
Sbjct: 3019 GYEGLSDKIYSLAGEVLKKLAAVDVTHRKFFTKELSELASGLSSSTVRVLATLSTTQKMS 3078

Query: 3076 LSTSSTDGAAILRVLQALSSLVTLL------TEKENDRGTPALSEVWEINSALEPLWHEL 3129
+T S GA+ILRVLQ LSSL + + T+KE D+ + + ++ ALEPLW EL
Sbjct: 3079 QNTCSMAGASILRVLQVLSSLTSTIDDSNVGTDKETDQEEQNIMQGLKV--ALEPLWQEL 3136

Query: 3130 SCCISKIEXXXXXXXXXXXXXXXXXXXXXGVMPPLPAGSQNILPYIESFFVVCEKLHPAQ 3189
CIS E L G+Q++LP IE+FFV+CEK+
Sbjct: 3137 GQCISMTELQLDHTAATSNVNPGDHVLGISPTSSLSPGTQSLLPLIEAFFVLCEKIQ--T 3194

Query: 3190 PGASHDSSIPVISDVEYATTSVTPQKASGTAVKVDEKHMPFVRFSEKHRKLLNAFIRQNP 3249
P + +V+ ++T + K + K + + F +F EKHR+LLN+F+RQNP
Sbjct: 3195 PSMLQQDATVTAGEVKESSTHGSSSKTIVDSQKKIDGSVTFSKFVEKHRRLLNSFVRQNP 3254

Query: 3250 GLLEKSFSLMLKVPRFIDFDNKRAHFRSKIKHQHDHHHS-PLRISVRRAYVLEDSYNQLR 3308
LLEKSFS+MLK PR IDFDNK+A+FRS+I+HQHD H S PLRISVRRAYVLEDSYNQLR
Sbjct: 3255 SLLEKSFSMMLKAPRLIDFDNKKAYFRSRIRHQHDQHISGPLRISVRRAYVLEDSYNQLR 3314

Query: 3309 MRSTQDLKGRLTVHFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNESTFQPNPN 3368
MRS QDLKGRL V FQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGN++TFQPNPN
Sbjct: 3315 MRSPQDLKGRLNVQFQGEEGIDAGGLTREWYQLLSRVIFDKGALLFTTVGNDATFQPNPN 3374

Query: 3369 SVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKN 3428
SVYQTEHLSYFKFVGR+V KALFDGQLLDV+FTRSFYKHILGVKVTYHDIEA+DPDY+KN
Sbjct: 3375 SVYQTEHLSYFKFVGRMVAKALFDGQLLDVYFTRSFYKHILGVKVTYHDIEAVDPDYYKN 3434

Query: 3429 LKWMLENDISDVLDLTFSIDADEEKLILYERTEVTDYELIPGGRNIKVTEENKHQYVDLV 3488
LKW+LEND+SD+LDLTFS+DADEEK ILYE+TEVTDYEL PGGRNI+VTEE KH+YVDLV
Sbjct: 3435 LKWLLENDVSDILDLTFSMDADEEKHILYEKTEVTDYELKPGGRNIRVTEETKHEYVDLV 3494

Query: 3489 AEHRLTTAIRPQINYFLEGFIELIPRELISIFNDKELELLISGLPDIDLDDLRANTEYSG 3548
A+H LT+AIRPQIN FLEG ELIPREL+SIFNDKELELLISGLP+ID DDL+ANTEY+
Sbjct: 3495 ADHILTSAIRPQINAFLEGLNELIPRELVSIFNDKELELLISGLPEIDFDDLKANTEYTS 3554

Query: 3549 YSAASPVIQWFWEVVQGLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYG 3608
Y+ SPVI+WFWEVV+ SKED AR LQFVTGTSKVPLEGF ALQGISG Q+ QIHKAYG
Sbjct: 3555 YTVGSPVIRWFWEVVKAFSKEDMARFLQFVTGTSKVPLEGFKALQGISGPQRLQIHKAYG 3614

Query: 3609 SPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEASEGFGFG 3652
SP+ LPSAHTCFNQLDLPEY SK+ ++ERLLLAIHEA+EGFGF
Sbjct: 3615 SPERLPSAHTCFNQLDLPEYQSKEQVQERLLLAIHEANEGFGFA 3658



Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 685/2080 (32%), Positives = 1064/2080 (51%), Gaps = 161/2080 (7%)

Query: 30 TEPPPMVKAFIEKIIQCPLQDIAIPLSGFRWEYNKGNFHHWRLLLLHFDTYFKTYLSCRX 89
+E P + FI + PL+ I PL+ FRWE++KG+FHHW L HFDT+F+ ++ R
Sbjct: 9 SEVPTKISLFINSVTSVPLELIQEPLASFRWEFDKGDFHHWVDLFYHFDTFFEKHVKVRK 68

Query: 90 XXXXXXXXXXXSP-LPKHAXXXXXXXXXXXXENCPNKSSFDGLE-HFKLLLASTDPEILI 147
P PK A ENC NK + E H LLLASTD +++
Sbjct: 69 DLRIEEEFDESDPPFPKDAVLQVLRVIRLVLENCTNKQFYTSYEQHLSLLLASTDADVVE 128

Query: 148 ATLETLSALVKINPSKLHGSTKMICCGSVNSYLLSLAQGWGSKEEGLGLYSCVMANEKVQ 207
A L+TL+A +K K I S+N L SLAQGWG KEEGLGL SC
Sbjct: 129 ACLQTLAAFLKRPTGKYS-----IRDASLNLKLFSLAQGWGGKEEGLGLTSCAT------ 177

Query: 208 DEALCLFPSEEIGHDQSNCRMGTTLYFELHGPSAQSKEHSADAVSPGSTVIHMPDLHLRK 267
E C DQ ++G TL FE + + + S + G VIH+PD+ +R
Sbjct: 178 -EHSC---------DQLFLQLGCTLLFEFY-----ASDESPSELPGGLQVIHVPDVSMRS 222

Query: 268 EDDLSLMKQCIEQFSVPSELRFSLLTRIRYARAFRSPRICRLYSRICLLSFIVLVQSGDA 327
E DL L+ + + +VP LRF+LLTR+R+ARAF S + Y+ I L +FIVLVQ+
Sbjct: 223 ESDLELLNKLVIDHNVPPSLRFALLTRLRFARAFSSLATRQQYTCIRLYAFIVLVQASGD 282

Query: 328 QEELVSFFANEPEYTNELIRIVRSEEVISGSIRTXXXXXXXXXXXXYTSSHHRARILSGS 387
E +VSFF EPE+ NEL+ +V E+ + IR S R R +
Sbjct: 283 TENVVSFFNGEPEFVNELVTLVSYEDTVPAKIRILCLQSLVAL------SQDRTRQPTVL 336

Query: 388 SLTFAGGNRMILLNVLQRAILSLKSSNDPSSLAFVEALLQFYLLHVVSTSTSGNNIRGSG 447
+ +GG+R +L ++Q+AI S+ + SLAF EALL + +VS+S+ + +R +G
Sbjct: 337 TAVTSGGHRGLLSGLMQKAIDSVICNTSKWSLAFAEALLSLVTV-LVSSSSGCSAMREAG 395

Query: 448 MVPTFLPLLEDFDPTHIHLVCFAVKTLQKLMDYSSSAVSLFKELGGIELLAQRLQKEVHR 507
++PT +PL++D DP H+HLV AV L+ MDYS+ A +LF++LGG++ RL++EV R
Sbjct: 396 LIPTLVPLIKDTDPQHLHLVSTAVHILEVFMDYSNPAAALFRDLGGLDDTIFRLKQEVSR 455

Query: 508 VIGLVGETDNIMLTG--------ESLRYSTDQL-YSQKRLIKVSLKALGSATYAPANSTR 558
V E + +G E L YS + Y ++ L+K L+A+ TYAP N T
Sbjct: 456 TEDDVKEI--VCCSGSNGPEDDTEQLPYSEALISYHRRLLLKALLRAISLGTYAPGN-TN 512

Query: 559 SQHSQDSSLPVTLRLIFQNVDKFGGDIYYSAVTVMSEIIHKDPTCFSALHEMGLPDAFLL 618
S++S LP L +IF+ FGG ++ A TVMS++IHKDPTCF+AL GL AFL
Sbjct: 513 LYGSEESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFNALDSAGLTSAFLD 572

Query: 619 SVGSEILPSSKALTCIPNGLGAICLNAKGLEAVRESSSLRFLIDIFTSKKYILAM-NEAI 677
++ E++ S++A+TCIP L A+CLN GL+AV++ ++LR + IF+S Y+ A+ ++
Sbjct: 573 AISDEVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFSSPSYLKALTSDTP 632

Query: 678 VPLANAVEELLRHVSTLRSSSVDIIIEIIHKIASFGDGNGTGFSGKAE------GTAMET 731
L++ ++ELLRH S+LR+ VD+ IEI++ I G G S A+ ME
Sbjct: 633 GSLSSGLDELLRHQSSLRTYGVDMFIEILNSILIIGSGMEATTSKSADVPTDAAPVPMEI 692

Query: 732 DSENKEKEGHCCIVGTSYSAIEGISDEQFIQLCVFHLMVLIHRTMENAETCRLFVEKSGI 791
D + K +S ++ I E F+ CV ++ L ++NAE C LFVEK GI
Sbjct: 693 DVDEKSLAVSDEAEPSSDTSPANI--ELFLPDCVCNVARLFETVLQNAEVCSLFVEKKGI 750

Query: 792 EALLNLLLRPTIAQSSDGMSIALHSTMVFKGFAQHHSIPLAHAFCSSLREHXXXXXXXXX 851
+ +L L P + S+ S+ ++ FK F+ HS LA CS LREH
Sbjct: 751 DTVLQLFSLPLMPLST---SLGQSFSVAFKNFSPQHSAGLARILCSYLREHLKKTNNLLV 807

Query: 852 XXSEPLLLDPRMTTDGAIXXXXXXXXXXXXXAAPKDN---RWVTALLTEFGNGGKDVLED 908
LL + A+ N + ++++E DVL++
Sbjct: 808 SIEGTQLL----KLESAVQTKILRSLSCLEGMLSLSNFLLKGSASVISELSAANADVLKE 863

Query: 909 IGRVHREVLWQIALLENRKPEIEE--DGACTSDLQQAEGDAS-ETEEQRLNSFR-QFLDP 964
+G +++ +WQ+AL + K + ++ D A + + + A E++E N+ ++ +P
Sbjct: 864 LGITYKQTIWQMALCNDTKEDEKKSVDRASDNSVSASSSTAERESDEDSSNALAVRYTNP 923

Query: 965 L---LRRRTSGWSIESQFFNLINLYRDLGRSTGSQHRSNLVGPRXXXXXXXXXXXXDDNS 1021
+ S W +F +++ GR R + R D+
Sbjct: 924 VSIRSSSSQSIWGGHREFLSVVR----SGRGVHGHTRHAIARMRGGRTRRHLESFNFDSE 979

Query: 1022 GTADKKESD-----KQRPYYTSCCDMVRSLSFHITHLFQELGKVMLLPSRRRDDVVNVSP 1076
AD + K++ +++ L+ + F L K +RRR D ++S
Sbjct: 980 IPADLPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTSLVKGFTSANRRRIDGPSLSS 1039

Query: 1077 ASKSVASTFASIAFDHMNYGGRCVNLSGTEESISTKCRYFGKVIDFMDNVLME-RPDSCN 1135
ASK++ + A + + +N+ G +G + S+S KCRY GKV+D + + + R C
Sbjct: 1040 ASKTLGTALAKVFLEALNFQGYGAA-AGPDTSLSLKCRYLGKVVDDITFLTFDTRRRVCF 1098

Query: 1136 PIMLNCLYGRGVIETVLTTFEATSQLLFTVNRAPASPMDTDDANAKQDDKEDTDNS-WIY 1194
M+N Y G + +LTTFEATSQLL+ V P S + N K ++ +S W+
Sbjct: 1099 TAMVNSFYVHGTFKELLTTFEATSQLLWKV---PFSIRASSTENEKSGERNLWSHSKWLV 1155

Query: 1195 GSLASYGKLMDHLVTSSFILSSFTK-HLLAQP----LTNGNTAFPRDAETFVKVLQSRVL 1249
+L +Y + +D+ V S+++LS ++ LL QP L+ G PR+ ETFV+ LQS+VL
Sbjct: 1156 DTLQNYCRALDYFVNSTYLLSPTSQTQLLVQPASVDLSIGLFPVPREPETFVRNLQSQVL 1215

Query: 1250 KTVLPVWTHPQFVDCSYEFISTVISIIRHVYTGVEVKNVNGSGGARITGP-----PPNET 1304
+ +LP+W HP F DC+ F+++V S++ H+Y+GV N SG + T P+E
Sbjct: 1216 EVILPIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDTRENRSGATQGTNQRALPLQPDEA 1275

Query: 1305 TISTIVEMGFSRSRAEEALRQVGSNSVELAMEWLFSHPEE-IQEDDELARALAMSLGNSE 1363
+ IVEMGFSRSRAE+ALR+VG+NSVE+AM+WLF++PE+ +QEDDELA+ALA+SLGNS
Sbjct: 1276 IVGMIVEMGFSRSRAEDALRRVGTNSVEMAMDWLFTNPEDPVQEDDELAQALALSLGNSS 1335

Query: 1364 SDAK-DAVANDNALQLEEEMVLLPPVDELLSTCTKLL-SKEPLAFPVRDLLVMICSHDDG 1421
K + + EE PPVDE+++ KL S + +AFP+ DL V +C+ + G
Sbjct: 1336 ETPKLEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSIAFPLVDLFVTLCNRNKG 1395

Query: 1422 HHRSNVVSFIVERIKECGLVPSNGNVATLAALFHVLALILNEDAVAREAASTSGLIKIAS 1481
R +V ++++++K L S + L + H+LAL+L+ED RE A+ G++ +A
Sbjct: 1396 EDRPKIVFYLIQQLKLVQLDFSK-DTGALTMIPHILALVLSEDDNTREIAAQDGIVAVAI 1454

Query: 1482 DLLYQWDSSLDSREKQQVPKWVTAAFLALDRLLQVDQKLNSEIAE-------------QL 1528
+L ++ +S PK ++A L L +LQ +L+SE E Q
Sbjct: 1455 GILTDFNLKSESETDILAPKCISALLLVLSMMLQAQTRLSSEYVEGNQGGSLVLSDSPQD 1514

Query: 1529 KKEAVNSQQTSITIDEDRQNKLQSALGLSMKYADIHEQKRLVEVACSCMNNQLPSDTMHA 1588
A+ +S + L+S G S Y + E +++ +AC + ++P+ M A
Sbjct: 1515 STAALKDALSSDVAKGESNQALESMFGKSTGYLTMEESSKVLLIACGLIKQRVPAMIMQA 1574

Query: 1589 ILLLCSNLTRNHSVAXXXXXXXXXXXXXXXXXXXXXXXXDNVAASIVRHVLEDPQTLQQA 1648
+L LC+ LT++H++A D VA+ IVRH++EDPQTLQ A
Sbjct: 1575 VLQLCARLTKSHALAIQFLENGGLSSLFNLPKKCFFPGYDTVASVIVRHLVEDPQTLQIA 1634

Query: 1649 MESEIKHSLAVASNRHPNGRVNPHNFLLNLASVIYRDPVIFMLAAQSVCQVEMVGERPYI 1708
ME+EI+ +L + RH GRV P FL +A VI RDPV+FM A S CQ+E G ++
Sbjct: 1635 METEIRQTL--SGKRHI-GRVLPRTFLTTMAPVISRDPVVFMKAVASTCQLESSGGTDFV 1691

Query: 1709 VLLXXXXXXXXXXXXXXXXXXXXXXXVQNSDGKVVLGNTNTAPTGNGHGKIQDSNTKSAK 1768
+L V S+ G + P G K+ D + K +K
Sbjct: 1692 IL----------------TKEKEKPKVSGSEH----GFSLNEPLGISENKLHDGSGKCSK 1731

Query: 1769 GHRKPNQSFINVIELLLESICTFVPPLK--DDIASNVLPGTPASTDMDIDXXXXXXXXXX 1826
HR+ +FI VI+ L++ + +F P LK + A+N++ MD+D
Sbjct: 1732 SHRRVPTNFIQVIDQLIDIVLSF-PGLKRQEGEAANLI-------SMDVDEPTTKVKGKS 1783

Query: 1827 XXXXXDGNETGSQVASASLAKIVFIXXXXXXXXXXXXXXXXXXXRRDAEISCIRGSYQKS 1886
+ E GS+ S LA++ FI RRD EIS +RGS
Sbjct: 1784 KVGEPEKAELGSE-KSEELARVTFILKLLSDIVLMYLHGTSVILRRDTEISQLRGSNLPD 1842

Query: 1887 PAGLSMGWIFSHILHNFLPYSRNSKKDKKADGDWRQKLATRANQFIVGACVRSTEARKRV 1946
+ + G I+ H++H LP S + +W++KL+ +A+ F+V C RS E RKR+
Sbjct: 1843 DSPGNGGLIY-HVIHRLLPISLEKFVGPE---EWKEKLSEKASWFLVVLCSRSNEGRKRI 1898

Query: 1947 FGEISYIINEFV----DSCHDIKRPGNEIQVFVDLLNDVLAARTPAGSY----ISAEAST 1998
E++ +++ F S + P + F +L+ +L + + ++ S + +
Sbjct: 1899 INELTRVLSVFASLGRSSSQSVLLPDKRVLAFANLVYSILTKNSSSSNFPGCGCSPDVAK 1958

Query: 1999 TFIDAGLVKSFTCTLQVLDLDHAGSSEVATGIIKALELVT 2038
+ ID G ++ T L V+DLDH + ++ T I+K+LE +T
Sbjct: 1959 SMIDGGTIQCLTSILNVIDLDHPDAPKLVTLILKSLETLT 1998

Query: CNT0001834
Subject: sp|O13834|PTR1_SCHPO E3 ubiquitin-protein ligase ptr1

OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=B11B22.010 PE=3 SV=4

 Score =  504 bits (1298), Expect = e-141,   Method: Compositional matrix adjust.
Identities = 277/675 (41%), Positives = 395/675 (58%), Gaps = 70/675 (10%)

Query: 3003 LPKAELRLLCSLLAQEGLSDNAYNLVAEVMKKLVAIAPTHCELFVTELAEAVQKLTSSAM 3062
+P+ L+L+ ++ S + +K L I P ++F EL + L+ + +
Sbjct: 3447 IPEHNLKLVINIFVARECSSKTFQNTISTIKNLSNI-PGAKKVFGDELVRQARVLSENIL 3505

Query: 3063 NEL-RVFSEAMKA------------LLSTSSTDGAAILRVLQALSSLVTLLTEK------ 3103
++L + +KA S +++ +LRVL AL L ++K
Sbjct: 3506 SDLDNLLPHILKAESGTQIQGVALAKFSPGASEQNKLLRVLTALDHLFDSKSKKQDKPAE 3565

Query: 3104 -ENDRGTPALSEVWEINSALEPLWHELSCCISKIEXXXXXXXXXXXXXXXXXXXXXGVMP 3162
EN + S W N +W +LS C+S I
Sbjct: 3566 GENTKEDLLGSLYW--NPTFGKMWDKLSACLSAIRQRDNMLNVATI-------------- 3609

Query: 3163 PLPAGSQNILPYIESFFVVCEKLHPAQPGASHDSSIPVISDVEYATTSVTPQKASGTAVK 3222
+LP IES VVC+ + A +++ S E TS P+
Sbjct: 3610 --------LLPLIESLMVVCKNTTLSDASAVSNAN----SQKEMLLTSPPPE-------- 3649

Query: 3223 VDEKHMPFVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRAHFRSKI--K 3280
D F F+E+HR++LN +R NP L+ +FSL++K P+ ++FDNKR +F + K
Sbjct: 3650 -DRIAGLFFTFTEEHRRILNELVRHNPKLMSGTFSLLVKNPKVLEFDNKRNYFNRSVHSK 3708

Query: 3281 HQHDHH-HSPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREW 3338
+Q H PL++ VRR +V DS+ L + +LK G+L + FQGEEG+DAGG+TREW
Sbjct: 3709 YQQTRHSFPPLQLQVRREHVFHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREW 3768

Query: 3339 YQLLSRVIFDKGALLFTTVGNE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLD 3397
+Q+LSR +FD +LF V ++ +TF PN S EHL +FKF+GR++GKAL++G+LL+
Sbjct: 3769 FQVLSRQMFDPNYVLFVPVSSDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLE 3828

Query: 3398 VHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILY 3457
+F+R+ YK ILG V+ D+E+ DPDY+K+L WMLENDI+D++ TFS++ D ++
Sbjct: 3829 CYFSRAVYKRILGKPVSVKDMESFDPDYYKSLVWMLENDITDIITETFSVEDD-----VF 3883

Query: 3458 ERTEVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPQINYFLEGFIELIPRELI 3517
+V D LI GRNI VTEENKH+YV L+ EH+L T+++ Q+ FL GF E+IP ELI
Sbjct: 3884 GEVKVVD--LIENGRNIPVTEENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELI 3941

Query: 3518 SIFNDKELELLISGLPDIDLDDLRANTEYSGYSAASPVIQWFWEVVQGLSKEDKARLLQF 3577
+IFN++ELELLISGLPDID+DD +ANTEY YSA +P IQWFW V+ KE+ A+LLQF
Sbjct: 3942 AIFNEQELELLISGLPDIDIDDWKANTEYHNYSAGAPQIQWFWRAVRSFDKEELAKLLQF 4001

Query: 3578 VTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEER 3637
VTGTSKVPL GF L+G++G +F IH+ YGS D LPS+HTCFNQLDLPEY + + L +
Sbjct: 4002 VTGTSKVPLNGFKELEGMNGVSRFNIHRDYGSKDRLPSSHTCFNQLDLPEYENYETLRSQ 4061

Query: 3638 LLLAIHEASEGFGFG 3652
LL AI S+ FGF
Sbjct: 4062 LLKAITAGSDYFGFA 4076



Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 180/420 (42%), Gaps = 64/420 (15%)

Query: 2549 ENSSRDADQQGPAA-----EQQVNSDAGSGAIDPAFLDALPEELRAEVL----SAQQGQV 2599
EN+ + A+ + P QQ+ D ID +L+ALPEE R EV+ S ++ Q
Sbjct: 2947 ENAEQQAEDERPRVYYTLRNQQI--DITELGIDAEYLEALPEEFRDEVIAQAISTRRSQA 3004

Query: 2600 AQPSNVESQNTGDIDPEFLAALPADIRAEVXXXXXXXXXXXXXE--LEGQ---PVEMDTV 2654
+ + E +NT ++ EFL ALP ++R E+ + GQ P +MD
Sbjct: 3005 REQVSQEGENT-EVFQEFLEALPEELRNEILHQEQHEQRRRERQNAAGGQDLGPADMDPA 3063

Query: 2655 SIIATFPSDLREEVLLTSPDTILANLTPALVAEANMLRERFAHRYSRTLFGMYPXXXXXX 2714
SI+ TFP LR++VLL + I+ +L P L AEA L R HR ++
Sbjct: 3064 SILLTFPPGLRQQVLLDQGEDIMEHLGPELAAEARTLVAR--HRQ------LHAQQGGQA 3115

Query: 2715 XXXXXXXXXXLDGAGGTISSRRSSGVKVVEADGAPLVDTEALHAMIRLFRVVQP-LYKGQ 2773
+ GT+ K+ + ++D + + ++RL V Q +
Sbjct: 3116 ASRSRDAQRPTEAGAGTVQ-------KIQKRTVVQMLDKQGIATLLRLMFVSQQGSIRSS 3168

Query: 2774 LQRLLLNLCAHSETRTSLVKILMDLL------MLDVKRPVSYFS---------KVEPPYR 2818
L + NLC + + R ++ L+ +L M V+R + S + P+
Sbjct: 3169 LFSIFANLCENRQNRLDVISSLLQILQDGCANMDAVERSFAQISHKAKQLKEKDAKTPHP 3228

Query: 2819 LY-----GCQSNVMYSRPQSFDGVPPLLSRRILGILTYLARNHLYVAK-FLLQCRLSHPA 2872
L G +N + P S + P L+ ++ L +L L++ + ++ FL +
Sbjct: 3229 LKRSLTGGTNNNGQF--PASSEVSPLLIVQQCLDLLVELSKLNPHIPSVFLTEHETVAST 3286

Query: 2873 IKEPDDPRGKAVMVVEDEVNISESNDGYIAIAMLLGLLNQPLYLRSIAHLEQLLDLLDVI 2932
+K +GK +VN AI LL LL++ L + S A ++ L DLL+ +
Sbjct: 3287 LKRSLSRKGKG-----KDVN---GKAQKFAINSLLTLLDRSLVMESSAVMQVLADLLNKV 3338



Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 624 ILPSSKALTCIPNGLGAICLNAKGLEAVRESSSLRFLIDIFTSKKYILAMN---EAIVPL 680
ILPSS+++ IP L +I LN +G++ V S +++ ++IF S ++ M E +
Sbjct: 816 ILPSSESMNIIPTVLNSISLNNRGMKMVLSSGAIQSYMEIFESATHVQCMAHDPELASTI 875

Query: 681 ANAVEELLRHVSTLRSSSVDIIIEIIHKI 709
++++EL RH LR + + II++I ++
Sbjct: 876 GSSLDELSRHHPALRPAIANAIIDMIARV 904

Query: CNT0001834
Subject: sp|Q756G2|TOM1_ASHGO Probable E3 ubiquitin-protein ligase TOM1

OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ptr1 PE=1 SV=1

 Score =  469 bits (1207), Expect = e-131,   Method: Compositional matrix adjust.
Identities = 261/670 (38%), Positives = 381/670 (56%), Gaps = 74/670 (11%)

Query: 3002 NLPKAELRLLCSLLAQEGLSDNAYNLVAEVMKKLVAIAPTHCELFVTELAEAVQKLTSSA 3061
N+ LRL SL+ + S + VM L +I P L EL Q+ +S
Sbjct: 2613 NILDENLRLAASLITTDSCSSRTFQNALSVMFHLSSI-PKAKILIGKELLRHGQEYGNSI 2671

Query: 3062 MNELRVFSEAMK------------ALLSTSSTDGAAILRVLQALSSLVTLLTEKENDRGT 3109
N+L +K A +S++ A +LR L+AL + + +
Sbjct: 2672 TNDLSRLCADVKSGKNESELQVALAPFCPASSNQAKLLRCLKALDYIFE--RRPKGQEQS 2729

Query: 3110 PA----LSEVWEINSALEPLWHELSCCISKIEXXXXXXXXXXXXXXXXXXXXXGVMPPLP 3165
P L E ++ N LW LS C+S + +
Sbjct: 2730 PGNIIQLLEFYD-NLKFSSLWEVLSECLSALRDHTS----------------------IT 2766

Query: 3166 AGSQNILPYIESFFVVCEKLHPAQPGASHDSSIPVISDVEYATTSVTPQKASGTAVKVDE 3225
S +LP IES V+C + P P++ + T
Sbjct: 2767 HVSTVLLPLIESLMVICRLVFIELPEDVGKHISPILE--RFKTL---------------- 2808

Query: 3226 KHMPFVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRAHFRSKIKHQH-D 3284
F+ F+E+HRK++N + P L+ SFSL++K P+ ++F+NKR +F ++ +
Sbjct: 2809 ----FISFTEEHRKIINMMVFTTPSLMSGSFSLLVKNPKVLEFENKRNYFNRQLHEEAAK 2864

Query: 3285 HHHSPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLS 3343
+ PL I+VRR +V DSY L + ++K +L +HF+ EEG+DAGG+TREW Q+L+
Sbjct: 2865 EQYPPLNITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLA 2924

Query: 3344 RVIFDKGALLFTTV-GNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTR 3402
R +F+ LF V G+ +TF PN +S +HLS+FKF GR++GKAL+DG+LLD HF+R
Sbjct: 2925 RQMFNPDYALFLPVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSR 2984

Query: 3403 SFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDADEEKLILYERTEV 3462
+ YKH+L V+ DIE++DPDY+K+L WML NDI+D++ F+++ D + E+T V
Sbjct: 2985 AVYKHMLHRSVSVKDIESLDPDYYKSLVWMLNNDITDIITEEFAVEKD----VFGEKTVV 3040

Query: 3463 TDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPQINYFLEGFIELIPRELISIFND 3522
+LIP GRNI VTE NK YV+ + +++L +++ Q+ L+GF ++IP LI IFN+
Sbjct: 3041 ---DLIPNGRNIPVTELNKQNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNE 3097

Query: 3523 KELELLISGLPDIDLDDLRANTEYSGYSAASPVIQWFWEVVQGLSKEDKARLLQFVTGTS 3582
+ELELLISGLP+ID+DD + NTEY GY+ +SP +QWFW V+ +E++A+LLQF TGTS
Sbjct: 3098 QELELLISGLPEIDIDDWKNNTEYHGYNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTS 3157

Query: 3583 KVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAI 3642
KVPL GF L+G+SG Q+F IHK+YGS + LP +HTCFNQLDLPEY + + L LL AI
Sbjct: 3158 KVPLNGFKELEGMSGFQRFNIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAI 3217

Query: 3643 HEASEGFGFG 3652
+E SEGFGF
Sbjct: 3218 NEGSEGFGFA 3227



Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 164/703 (23%), Positives = 302/703 (42%), Gaps = 55/703 (7%)

Query: 30 TEPPPMVKAFIEKI----IQCPLQDIAIPLSGFR---WEYNKGNFHHWRLLLLHFDTYFK 82
++PPP V FI + + L +++ S FR W Y +G+ + W +L FD +
Sbjct: 13 SQPPPRVAEFIRQAQNEEVTSDLGLVSL-CSEFRKNDWPYPRGDLYSWVPVLNRFDAILE 71

Query: 83 TYLSCRXXXXXXXXXXXXSPLPKHAXXXXXXXXXXXXENCPNKSSFDGLEHFKLLLASTD 142
+ S +C N+S ++ + + LL S+
Sbjct: 72 RIVEHYSLKDKVQTKPFDSD-TLSILLEILSFSAHLLSHCANRSIYNSTVYLEYLLNSSV 130

Query: 143 PEILIATLETLSALV-KINPSKLHGSTKMICCGSVNSYLLSLAQGWGSKEEGLGLYSCVM 201
E++ +TL L +V K SK + + +L+ L Q M
Sbjct: 131 LEVIDSTLALLLHIVQKATISKRGKQLFSLSQDRLFRFLMFLPQD-------------AM 177

Query: 202 ANEKVQDEALCLFPSEEIGHDQSNCRMGTTLYFELHGPSAQSKEHSADAV--SPGSTVIH 259
Q+ LF S EI Q C + + Y S+ SK+ S+ + S G +++
Sbjct: 178 KTGFSQNYETLLF-SNEIP--QEWCSLELSYY-----KSSPSKDFSSASQPNSEGFSILK 229

Query: 260 MPDLHLRKEDDLSLMKQCIEQFSVPSELRFSLLTRIRYARAFRSPRICRLYSRICLLSFI 319
+P + + L+ + + +P + F LL + + RL RI LL+
Sbjct: 230 LPYNKVLGKPIEELLVKTLHDNQIPEQYSFDLLVSLMLRQNLYDINRRRLMIRIGLLALS 289

Query: 320 VLVQSGDAQEELVSFFANEPEYTNELIRIVRSEEVISGSIRTXXXXXXXXXXXXYTSSHH 379
LV + +Q F +PE T L +V + + + + +
Sbjct: 290 NLVYAH-SQAVQTRFLIADPEITTHLANLVSPDVDLPQNFKAVCFECFKAF---FFKKSM 345

Query: 380 RARILSGSSLTFAGGNRMILLNVLQRAILSLKSSNDPSSLAFVEALLQFYLLHVVSTSTS 439
+L+ +++ + G +++N+++ +L++ N +V++ F L +++S
Sbjct: 346 IPSVLASLNVSVSYG---LMMNLVRDFSKNLENPNFYYEREYVDSFYDF--LQFMTSSPL 400

Query: 440 GNNIRGSGMVPTFLPL-LEDFDPTHIHLVCFAVKTLQKLMDYSSSAVSLFKELGGIELLA 498
G N+ S + + L L P ++V ++ L L+D S A F E G+++L
Sbjct: 401 GGNMACSAGLTSLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESKGLDMLV 460

Query: 499 QRLQKEVHRVIGLV--GETDNIMLTGESLRYSTDQLYSQKRLIKVSLKALGSATYAPANS 556
R+Q E+ + + G+ + ++ S D+ + K L+K L + S +
Sbjct: 461 DRVQYELEAGLQDIKSGKGNPEIVLNMDYAISYDRYFLLKNLLKFVLHLIQSG----GSV 516

Query: 557 TRSQHSQDSSLPVTLRLIFQNVDKFGGDIYYSAVTVMSEIIHKDPTCFSALHEMGLPDAF 616
++ DSSL +L + ++ + +G +++ S +MS IH +PTC+ +HE L AF
Sbjct: 517 VELRNLIDSSLISSLAFLLEHHEVYGSNLFASTTNIMSTFIHNEPTCYGIIHEKKLSHAF 576

Query: 617 LLSVGSEILPSSKALTCIPNGLGAICLNAKGLEAVRESSSLRFLIDIFTS----KKYILA 672
L +V +IL SS A+T IP GAICLN++G + E + + L IFTS K I +
Sbjct: 577 LDAVNRKILNSSDAITSIPLAFGAICLNSQGFDLFLEKNPIPQLFSIFTSLNHCKSLISS 636

Query: 673 MNEAIVPLANAVEELLRHVSTLRSSSVDIIIEIIHKIASFGDG 715
N AI L ++EL+RH +L+ V +I + ++++ D
Sbjct: 637 DNAAI--LGTYIDELMRHQPSLKDPIVKMIFKACDQVSALLDN 677

Query: CNT0001834
Subject: sp|Q03280|TOM1_YEAST E3 ubiquitin-protein ligase TOM1

OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=TOM1 PE=3 SV=2

 Score =  459 bits (1180), Expect = e-128,   Method: Compositional matrix adjust.
Identities = 259/673 (38%), Positives = 381/673 (56%), Gaps = 79/673 (11%)

Query: 3002 NLPKAELRLLCSLLAQEGLSDNAYNLVAEVMKKLVAIAPTHCELFVTELAEAVQKLTSSA 3061
++ K L + S++ + + + +M L AI H E F TEL ++
Sbjct: 2643 DIEKKYLASIVSIIKLDSCNTKVFQQTLNLMTNLFAIKDAH-ETFTTELCNLAKETIEVL 2701

Query: 3062 MNELRVFSEAMKAL-------------LSTSSTDGAAILRVLQALSSLVTLLTEKENDRG 3108
+ +L ++ + A+ + S+D + +L+VL A+ + + +KE ++
Sbjct: 2702 VTDLDALAKEVPAVDSGTEVSSEIIQKFTVPSSDQSKLLKVLTAID-YIYVNRKKEEEQV 2760

Query: 3109 TPALSEVWEINSALEPLWHELSCCISKIEXXXXXXXXXXXXXXXXXXXXXGVMPPLPAGS 3168
L ++ L +W LS C+++ E P + +
Sbjct: 2761 VDQLLPLYN-KMELGHIWVSLSNCLTRFEEK----------------------PRMSTSA 2797

Query: 3169 QNILPYIESFFVVCEKLHPAQPGASHDSSIPVISDVEYATTSVTPQKASGTAVKVDEKHM 3228
+LP IES VVC+ S V ++ +A K D
Sbjct: 2798 TILLPLIESLMVVCKH-----------------SKVRETKDALLKYEAK----KCDFART 2836

Query: 3229 P----FVRFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRAHFRSKIKHQHD 3284
P F F++ H+KLLN IR NP L+ FSL++K P+ +DFDNKR +F ++++
Sbjct: 2837 PVENLFFAFTDLHKKLLNEMIRSNPKLMSGPFSLLVKNPKILDFDNKRYYFTAQLR-AIT 2895

Query: 3285 HHHSPLRISVRRAYVLEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQLLS 3343
H L ISVRR +V DSY L +S +D+K +L + F+GE G+DAGG+TREWYQ+LS
Sbjct: 2896 HDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITREWYQVLS 2955

Query: 3344 RVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTR 3402
R +F+ LF V +++TF+PN S EHLS+FKF+G ++GKA+ D LD HF+R
Sbjct: 2956 RQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQCFLDCHFSR 3015

Query: 3403 SFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDISDVLDLTFSIDAD---EEKLILYER 3459
YK+ILG V D+E++D DY+K+L W+LENDI+D+++ TFS++ D E K+I
Sbjct: 3016 EVYKNILGKPVALKDMESLDLDYYKSLIWILENDITDIIEETFSVETDDYGEHKVI---- 3071

Query: 3460 TEVTDYELIPGGRNIKVTEENKHQYVDLVAEHRLTTAIRPQINYFLEGFIELIPRELISI 3519
ELI G ++ VTE+NKH YV + E++L T+++ Q+ FL+GF +IP++LISI
Sbjct: 3072 ------ELIENGAHVAVTEQNKHDYVKKIVEYKLQTSVKDQMENFLQGFYAIIPKDLISI 3125

Query: 3520 FNDKELELLISGLPDIDLDDLRANTEYSGYSAASPVIQWFWEVVQGLSKEDKARLLQFVT 3579
F+++ELELL+SGLPDID+DD + NT Y Y+ I +FW V+ KE++A+LLQFVT
Sbjct: 3126 FDEQELELLVSGLPDIDVDDWKNNTIYVNYTPTCKQINYFWRAVRSFDKEERAKLLQFVT 3185

Query: 3580 GTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLL 3639
GTSKVPL GF L G++G KF IH+ YGS D LPS+HTCFNQLDLP Y S + L LL
Sbjct: 3186 GTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLRGSLL 3245

Query: 3640 LAIHEASEGFGFG 3652
LAI+E EGFG
Sbjct: 3246 LAINEGHEGFGIA 3258



Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)

Query: 564 DSSLPVTLRLIFQNVDKFGGDIYYSAVTVMSEIIHKDPTCFSALHEMGLPDAFLLSVGSE 623
DS + + I +N FG + A+ V+ II+ +PT + L E G L +
Sbjct: 536 DSPILLAFNKILENRPVFGYTLVSHALDVVQTIINTEPTIYQVLVESGTIPYILQNFDQF 595

Query: 624 ILPSSKALTCIPNGLGAICLNAKGLEAVRESSSLRFLIDIFTSKKY--ILAMNEAIVPLA 681
+ P+S L +P + AICLN GL+ V+E + L++L + + ++ IL+ + V
Sbjct: 596 LGPTSDLLCMLPEVISAICLNTDGLKQVKEKNLLKYLFQVIKTPEFAKILSWEDQAVNYG 655

Query: 682 NAVEELLRHVSTLR 695
A++EL RH L+
Sbjct: 656 VALDELARHYPELK 669