Query: CNT0006484
Subject: sp|Q8GY23|UPL1_ARATH E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis

thaliana GN=UPL2 PE=1 SV=3

 Score = 1113 bits (2880), Expect = 0.0,   Method: Compositional matrix adjust.
Identities = 742/2090 (35%), Positives = 1122/2090 (53%), Gaps = 176/2090 (8%)

Query: 31 SEPPPKIKAFIDKVIQSPLQDIAIPLSGFHWEYSKGNFHHWRPLFLHFDTYFKTYLSCRN 90
SE P KI FI+ V PL+ I PL+ F WE+ KG+FHHW LF HFDT+F+ ++ R
Sbjct: 9 SEVPTKISLFINSVTSVPLELIQEPLASFRWEFDKGDFHHWVDLFYHFDTFFEKHVKVRK 68

Query: 91 DLLLSDNTLEDDSPFPKHAVLQILRVMQIILENCHNKSSFGGLE-HFKLLLTSTDPEILI 149
DL + + E D PFPK AVLQ+LRV++++LENC NK + E H LLL STD +++
Sbjct: 69 DLRIEEEFDESDPPFPKDAVLQVLRVIRLVLENCTNKQFYTSYEQHLSLLLASTDADVVE 128

Query: 150 ATLETLSALVKINPSKLHGSGKL-IGCGSVNGCLLSLAQGWGSKEEGLGLYSCVMANERT 208
A L+TL+A +K +GK I S+N L SLAQGWG KEEGLGL SC
Sbjct: 129 ACLQTLAAFLK------RPTGKYSIRDASLNLKLFSLAQGWGGKEEGLGLTSCA------ 176

Query: 209 QEEGLSLFPSDMENDRDKSQYRLGSTLYFELHGVNXXXXXXXXXXXXXNLSVIHITDLHL 268
E+ D+ +LG TL FE + + L VIH+ D+ +
Sbjct: 177 -----------TEHSCDQLFLQLGCTLLFEFYASD-----ESPSELPGGLQVIHVPDVSM 220

Query: 269 RKEDDLLLMKQYIEQYNVPPELRFSLLTRIRYARAFRSPRICRLYSRICLLAFIVLVQSN 328
R E DL L+ + + +NVPP LRF+LLTR+R+ARAF S + Y+ I L AFIVLVQ++
Sbjct: 221 RSESDLELLNKLVIDHNVPPSLRFALLTRLRFARAFSSLATRQQYTCIRLYAFIVLVQAS 280

Query: 329 DAHDELVSFFANEPEYTNELIRIVRSEETVPGTIRTXXXXXXXXXXXXYSASHERARILS 388
+ +VSFF EPE+ NEL+ +V E+TVP IR + S +R R +
Sbjct: 281 GDTENVVSFFNGEPEFVNELVTLVSYEDTVPAKIRI------LCLQSLVALSQDRTRQPT 334

Query: 389 GSSINFAGGNRMILLNVLQRAVXXXXXXXXXXXXAFVEALLQFYLLHXXXXXXXXXXXXX 448
+ +GG+R +L ++Q+A+ AF EALL L+
Sbjct: 335 VLTAVTSGGHRGLLSGLMQKAIDSVICNTSKWSLAFAEALLS--LVTVLVSSSSGCSAMR 392

Query: 449 XXXMVPTFLPLLEDSDPTHMHLVCFAVKTLQKLMDYSSAAVSLFKDLGGVELLARRLQIE 508
++PT +PL++D+DP H+HLV AV L+ MDYS+ A +LF+DLGG++ RL+ E
Sbjct: 393 EAGLIPTLVPLIKDTDPQHLHLVSTAVHILEVFMDYSNPAAALFRDLGGLDDTIFRLKQE 452

Query: 509 VHRVIGLAGANDSSMII--GESSGYSDD--QLYSQKRLIRV--------LLKALGSATYI 556
V R +D I+ S+G DD QL + LI LL+A+ TY
Sbjct: 453 VSRT-----EDDVKEIVCCSGSNGPEDDTEQLPYSEALISYHRRLLLKALLRAISLGTYA 507

Query: 557 PANSTRSQNSHDNSLPVTLSLIFGNVEKFGGDIYFSAVTVMSEIIHKDPTCFSALHELGL 616
P N T S ++ LP L +IF + FGG ++ A TVMS++IHKDPTCF+AL GL
Sbjct: 508 PGN-TNLYGSEESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFNALDSAGL 566

Query: 617 PDAFLSSVVAGILPSSKALTCIPNGLGAICLNVKGLEAVKETSALRFLVDIFTTKKYVVA 676
AFL ++ ++ S++A+TCIP L A+CLN GL+AVK+ +ALR V IF++ Y+ A
Sbjct: 567 TSAFLDAISDEVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFSSPSYLKA 626

Query: 677 M-NEAIVPLANAVEELLRHVSSLRSTGVDIIIEIVDRIASIGDDNVGSSGKV------NG 729
+ ++ L++ ++ELLRH SSLR+ GVD+ IEI++ I IG ++ K
Sbjct: 627 LTSDTPGSLSSGLDELLRHQSSLRTYGVDMFIEILNSILIIGSGMEATTSKSADVPTDAA 686

Query: 730 TTAMEMDSEDKENDGHCCLVGSVDSAAEGISNEQFIQLCIFHVMVLVHRTMENSETCRLF 789
ME+D ++K S D++ I E F+ C+ +V L ++N+E C LF
Sbjct: 687 PVPMEIDVDEKSLAVSDEAEPSSDTSPANI--ELFLPDCVCNVARLFETVLQNAEVCSLF 744

Query: 790 VEKSGIEALLKLLLRPNIAQSSEGMSIALHSTMVFKGFTQHHSAPLARAFCSSLRDHLKK 849
VEK GI+ +L+L P + S+ S+ ++ FK F+ HSA LAR CS LR+HLKK
Sbjct: 745 VEKKGIDTVLQLFSLPLMPLST---SLGQSFSVAFKNFSPQHSAGLARILCSYLREHLKK 801

Query: 850 ALTGFSVASGSFLLDPRLTPDSGIFPSXXXXXXXXXXAASKDN---RWVTALLTEFGNDS 906
G+ LL + I S S N + ++++E +
Sbjct: 802 TNNLLVSIEGTQLLKLESAVQTKILRSLSCLEGML----SLSNFLLKGSASVISELSAAN 857

Query: 907 KDVLEDIGRVQREVLWQIALLEDAKIETED--DGASSFAESQQSEPNANDSEEQRFNSFR 964
DVL+++G ++ +WQ+AL D K + + D AS + S S +S+E N+
Sbjct: 858 ADVLKELGITYKQTIWQMALCNDTKEDEKKSVDRASDNSVSASSSTAERESDEDSSNALA 917

Query: 965 -QFLDPL---LRRRMSGWSVESQFFDLLNLYRDLGRATGLQRLTADGSSNLRLGASHQLH 1020
++ +P+ S W +F ++ R G+ T + +R G + +
Sbjct: 918 VRYTNPVSIRSSSSQSIWGGHREFLSVVRSGR------GVHGHTRHAIARMRGGRTRRHL 971

Query: 1021 HSASSDST-----GVISKKEDEKQRSYYSSCCDMVRSLSFHITHLFQELGKAMLLP-RRR 1074
S + DS V S + K++S +++ L+ + F L K RRR
Sbjct: 972 ESFNFDSEIPADLPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTSLVKGFTSANRRR 1031

Query: 1075 DDTLNVSPSSKSVVSTFASIALDHMNFGGHVNPSGSEVSISTKCRYFGKVIDFIDGILLD 1134
D ++S +SK++ + A + L+ +NF G+ +G + S+S KCRY GKV+D I + D
Sbjct: 1032 IDGPSLSSASKTLGTALAKVFLEALNFQGYGAAAGPDTSLSLKCRYLGKVVDDITFLTFD 1091

Query: 1135 -RPDSCNPVLVNCLYGHGVVQSVLTTFVATSQLLFTVNRAPASPMETDDGISKQDEKDET 1193
R C +VN Y HG + +LTTF ATSQLL+ V P S + K E++
Sbjct: 1092 TRRRVCFTAMVNSFYVHGTFKELLTTFEATSQLLWKV---PFSIRASSTENEKSGERNLW 1148

Query: 1194 DNS-WIYGPLASYGKLMDHLVTSSFILSPFTK-HLLAQP----LINGDIPFPRDAETFVK 1247
+S W+ L +Y + +D+ V S+++LSP ++ LL QP L G P PR+ ETFV+
Sbjct: 1149 SHSKWLVDTLQNYCRALDYFVNSTYLLSPTSQTQLLVQPASVDLSIGLFPVPREPETFVR 1208

Query: 1248 VLQSMVLKVVLPVWTNPQFTDCSYDFXXXXXXXXXXXYSGVEVKNVNSNASARITGP--- 1304
LQS VL+V+LP+W +P F DC+ +F YSGV N + + + T
Sbjct: 1209 NLQSQVLEVILPIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDTRENRSGATQGTNQRAL 1268

Query: 1305 --PPNETAISTIVEMGFSRSRAEEALRQVGANSVELAMEWLFSHPEE-TQEDDELARALA 1361
P+E + IVEMGFSRSRAE+ALR+VG NSVE+AM+WLF++PE+ QEDDELA+ALA
Sbjct: 1269 PLQPDEAIVGMIVEMGFSRSRAEDALRRVGTNSVEMAMDWLFTNPEDPVQEDDELAQALA 1328

Query: 1362 MSLGNSGSDAKEEVANESTQHLEEEV-IQLPPVEELLSTCTKLLQMKEPLAFPVRDLLVM 1420
+SLGNS K E + +EE + PPV+E+++ KL Q + +AFP+ DL V
Sbjct: 1329 LSLGNSSETPKLEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSIAFPLVDLFVT 1388

Query: 1421 ICSQNDGQYRSSVITFIIDQMKLCSL--TSESGNVIMLSALFHVLALILHEDAVAREVAF 1478
+C++N G+ R ++ ++I Q+KL L + ++G + M+ H+LAL+L ED RE+A
Sbjct: 1389 LCNRNKGEDRPKIVFYLIQQLKLVQLDFSKDTGALTMIP---HILALVLSEDDNTREIAA 1445

Query: 1479 KNGLVKLATDLLSRWDSGACDSEKPQVPKWVTAAFLAIDRLLQVDQKLNSELAEQLKKDD 1538
++G+V +A +L+ ++ + PK ++A L + +LQ +L+SE E +
Sbjct: 1446 QDGIVAVAIGILTDFNLKSESETDILAPKCISALLLVLSMMLQAQTRLSSEYVEGNQGGS 1505

Query: 1539 V----SSQQTTITIDD---------DKQNKLQATLGLSPKHIDMHEQKRLIEIACNCIRN 1585
+ S Q +T + D + L++ G S ++ M E +++ IAC I+
Sbjct: 1506 LVLSDSPQDSTAALKDALSSDVAKGESNQALESMFGKSTGYLTMEESSKVLLIACGLIKQ 1565

Query: 1586 QLPSETMHAVLQLCSTLTRTHSIAVNFLDDXXXXXXXXXXXXXXXXXXDNVAATIIRHVL 1645
++P+ M AVLQLC+ LT++H++A+ FL++ D VA+ I+RH++
Sbjct: 1566 RVPAMIMQAVLQLCARLTKSHALAIQFLENGGLSSLFNLPKKCFFPGYDTVASVIVRHLV 1625

Query: 1646 EDPQTLQQAMESEIRHSLVAAANRHSNGRLTPRNFLLNLTSVISRDPMIFMQAAQSVCQV 1705
EDPQTLQ AME+EIR +L + RH GR+ PR FL + VISRDP++FM+A S CQ+
Sbjct: 1626 EDPQTLQIAMETEIRQTL--SGKRHI-GRVLPRTFLTTMAPVISRDPVVFMKAVASTCQL 1682

Query: 1706 EMVGERLYIVLLXXXXXXXXXXXXXXXXXXXXXXRNNDGKVTLGNASSIAPTGGHGKLTD 1765
E G +++L ++ +L I+ KL D
Sbjct: 1683 ESSGGTDFVIL--------------TKEKEKPKVSGSEHGFSLNEPLGIS----ENKLHD 1724

Query: 1766 PNSKNSKVHRKPPQSFVNVIELLLDSVISFVPPSKDETVVNVPLDSPSLAAMDIDVAASK 1825
+ K SK HR+ P +F+ VI+ L+D V+SF + E ++ +L +MD+D +K
Sbjct: 1725 GSGKCSKSHRRVPTNFIQVIDQLIDIVLSFPGLKRQEG------EAANLISMDVDEPTTK 1778

Query: 1826 GKGKAIVTTPEENDFNNQEASASLAKIVFILKLLTEILLMYSSSVNVLLRKDAEVSGCRA 1885
KGK+ V PE+ + + E S LA++ FILKLL++I+LMY +V+LR+D E+S R
Sbjct: 1779 VKGKSKVGEPEKAELGS-EKSEELARVTFILKLLSDIVLMYLHGTSVILRRDTEISQLRG 1837

Query: 1886 P--PQRGPTVYCITGIFHHILHRFLPYSRNSKKEKKIDG--DWMHKLATRASQFLVAACV 1941
P P G+ +H++HR LP S +K G +W KL+ +AS FLV C
Sbjct: 1838 SNLPDDSPGN---GGLIYHVIHRLLPISL-----EKFVGPEEWKEKLSEKASWFLVVLCS 1889

Query: 1942 RSTEARRRVFTEISNILNDFV----DSSNGFRPPGNDIQAFIDLLNDVLAARSPT----G 1993
RS E R+R+ E++ +L+ F SS P + AF +L+ +L S + G
Sbjct: 1890 RSNEGRKRIINELTRVLSVFASLGRSSSQSVLLPDKRVLAFANLVYSILTKNSSSSNFPG 1949

Query: 1994 AYISAEASATFIDVGLVRSLTRTLQALDLDHVDSPKAVTGLIKALEVVTK 2043
S + + + ID G ++ LT L +DLDH D+PK VT ++K+LE +T+
Sbjct: 1950 CGCSPDVAKSMIDGGTIQCLTSILNVIDLDHPDAPKLVTLILKSLETLTR 1999



Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 426/673 (63%), Positives = 503/673 (74%), Gaps = 24/673 (3%)

Query: 3029 HSVLLNLPQSELRLLCSLLAREGLSDNAYSLVAEVLKKLVAIAPTHCHLFITELAFSVQN 3088
+++ L LPQS+L LC LL EGLSD YSL EVLKKL A+ TH F EL+
Sbjct: 3000 YNIFLQLPQSDLCNLCMLLGYEGLSDKIYSLAGEVLKKLAAVDVTHRKFFTKELSELASG 3059

Query: 3089 LTKSAMDELHTFGETEKAXXXXXXXDGXXXXXXXXXXXXXXXXXNE------KEKDQQVL 3142
L+ S + L T T+K G ++ KE DQ+
Sbjct: 3060 LSSSTVRVLATLSTTQKMSQNTCSMAGASILRVLQVLSSLTSTIDDSNVGTDKETDQE-- 3117

Query: 3143 PEKEQTAALSQVWDIHAALEPLWLELSTCISKIE---SYSDSATVLPXXXXXXXXKPSGA 3199
EQ + + ALEPLW EL CIS E ++ + + + P+ +
Sbjct: 3118 ---EQNI----MQGLKVALEPLWQELGQCISMTELQLDHTAATSNVNPGDHVLGISPTSS 3170

Query: 3200 MPPLPAGSQNILPYIESFFVMCEKLHPGQPGASQDFSLAAVSDVEDASTSDGQQKTPVSV 3259
+ P G+Q++LP IE+FFV+CEK+ P Q + +V+++ST KT V
Sbjct: 3171 LSP---GTQSLLPLIEAFFVLCEKIQ--TPSMLQQDATVTAGEVKESSTHGSSSKTIVDS 3225

Query: 3260 LKVDEKHIAFVKFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRSKIK 3319
K + + F KF EKHR+LLN+F+RQNP LLEKSFS+MLK PR IDFDNK+++FRS+I+
Sbjct: 3226 QKKIDGSVTFSKFVEKHRRLLNSFVRQNPSLLEKSFSMMLKAPRLIDFDNKKAYFRSRIR 3285

Query: 3320 HQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREWY 3378
HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREWY
Sbjct: 3286 HQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREWY 3345

Query: 3379 QSLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVH 3438
Q LSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV+
Sbjct: 3346 QLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDVY 3405

Query: 3439 FTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDITDVLDVTFSIDADEEKLILYER 3498
FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND++D+LD+TFS+DADEEK ILYE+
Sbjct: 3406 FTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYEK 3465

Query: 3499 NEVTDCELIPGGRNIRVTEDNKHKYVDLVAEHRLTTAIRPQINAFLEGFNELIPRDLISI 3558
EVTD EL PGGRNIRVTE+ KH+YVDLVA+H LT+AIRPQINAFLEG NELIPR+L+SI
Sbjct: 3466 TEVTDYELKPGGRNIRVTEETKHEYVDLVADHILTSAIRPQINAFLEGLNELIPRELVSI 3525

Query: 3559 FNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQSLSKEDKARLLQFVT 3618
FNDKELELLISGLP+ID DD++ANTEY+ Y+ SPVI+WFWEVV++ SKED AR LQFVT
Sbjct: 3526 FNDKELELLISGLPEIDFDDLKANTEYTSYTVGSPVIRWFWEVVKAFSKEDMARFLQFVT 3585

Query: 3619 GTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLL 3678
GTSKVPLEGF ALQGISG Q+ QIHKAYGSP+ LPSAHTCFNQLDLPEY SK+ ++ERLL
Sbjct: 3586 GTSKVPLEGFKALQGISGPQRLQIHKAYGSPERLPSAHTCFNQLDLPEYQSKEQVQERLL 3645

Query: 3679 LAIHEANEGFGFG 3691
LAIHEANEGFGF
Sbjct: 3646 LAIHEANEGFGFA 3658



Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 279/566 (49%), Gaps = 69/566 (12%)

Query: 2349 LRNGRHGHRLNLWVDDNQQGGGSNASAVPQGLEELLVSQLRRPAPEKPSDENTTVEHESK 2408
+ + R G + W D S ++++ Q +EE ++ LR AP +T VE E+
Sbjct: 2367 MDSSRRGVGDSRWTDVGHPQPSSLSASIAQLIEEHFITNLRASAPV-----DTVVERETN 2421

Query: 2409 PQVSQSQESEADIRPETAVENNV----------------NNEPSCVPPPTSVAMDSIDNA 2452
Q Q+ + D+ P E + NN P P + + ID
Sbjct: 2422 TTEVQEQQ-QPDVPPSVGSETVLGDGNEGGEQSEEHELLNNNEVMHPLPLNSTPNEIDRM 2480

Query: 2453 DTRPAATESLQGTDASSMHSQSVEMQFEHNEAAVRDVE--AVSQESSGSGATLGESLRSL 2510
+ ++ D ++H S Q + + + +++V A+ + S+
Sbjct: 2481 EVGEGGGAPIEQVDREAVHLIS-SAQGQSDTSGIQNVSVTAIPPPVDDPDSNFQPSV--- 2536

Query: 2511 DVEIGSADGHDDGGERQGSADRMPLGDMQATRTRRTNVSFGNSTPLSGRDASLHSVTEVS 2570
DV++ S DG E S PL G++ LS +A T+
Sbjct: 2537 DVDMSS-----DGAEGNQSVQPSPLD--------------GDNNELSSMEA-----TQDV 2572

Query: 2571 ENPSQEADQVGPGEEQQINADADSGSIDPAFLDALPEELRAEVLSAQQGQVAQPSNTEQQ 2630
N Q + G ++NA IDP FL+ALPE+LRAEVL++QQ Q QP E
Sbjct: 2573 RNDEQVDEGSLDGRAPEVNA------IDPTFLEALPEDLRAEVLASQQAQSVQPPTYEPP 2626

Query: 2631 NTGDIDPEFLAALPPDIRAEVXXXXXXXXXXXXXELEGQPVEMDTVSIIATFPSDLREEV 2690
+ DIDPEFLAALPP+I+ EV + GQPV+MD SIIAT P+DLREEV
Sbjct: 2627 SVDDIDPEFLAALPPEIQREVLAQQRAQRMLQQSQ--GQPVDMDNASIIATLPADLREEV 2684

Query: 2691 LLTSSDAILANLTPALVAEANMLRERFAHRYHNRT-LFGMYHRNXXXXXXXXXXXXXXXL 2749
LLTSS+A+LA L P L+AEA MLR+R Y R+ +FG HR +
Sbjct: 2685 LLTSSEAVLAALPPPLLAEAQMLRDRAMRHYQARSRVFGSSHR--LNNRRNGLGYRLTGM 2742

Query: 2750 DRAGGSIVPRRSM-----GGKLVEADGAPLVDTEALKAMIRLLRVVQPLYKGQLQRLLLN 2804
+R G + +R + G K+ E +G PLV+ +ALK++IRLLR+ QPL KG LQRLLLN
Sbjct: 2743 ERGVGVTIGQRDVSSSADGLKVKEIEGDPLVNADALKSLIRLLRLAQPLGKGLLQRLLLN 2802

Query: 2805 LCAHSETRIALVKXXXXXXXXXTRKPANHLNTSEPSYRLYACQSHVMYSRPQYFDGVPPL 2864
LCAHS TR LV+ + L + P RLY CQ +V+Y R Q +G+PPL
Sbjct: 2803 LCAHSFTRANLVQLLLDMIRPEMETLPSELALTNPQ-RLYGCQLNVVYGRSQLLNGLPPL 2861

Query: 2865 VSRRILETMTYLARNHPYVAKILLQY 2890
V RR+LE +TYLA NH VA +L +
Sbjct: 2862 VFRRVLEVLTYLATNHSAVADMLFYF 2887

Query: CNT0006484
Subject: sp|Q9P4Z1|TOM1_NEUCR E3 ubiquitin-protein ligase TOM1-like

thaliana GN=UPL1 PE=1 SV=3

 Score = 1108 bits (2867), Expect = 0.0,   Method: Compositional matrix adjust.
Identities = 760/2185 (34%), Positives = 1156/2185 (52%), Gaps = 189/2185 (8%)

Query: 31 SEPPPKIKAFIDKVIQSPLQDIAIPLSGFHWEYSKGNFHHWRPLFLHFDTYFKTYLSCRN 90
SE P KIK+FI+ V PL+ I PL+ F WE+ KG+FHHW LF +FDT+F+ ++ R
Sbjct: 9 SEVPSKIKSFINSVTSVPLELIHEPLACFRWEFDKGDFHHWVDLFNYFDTFFEKHVQVRK 68

Query: 91 DLLLSDNTLEDDSPFPKHAVLQILRVMQIILENCHNKSSFGGLE-HFKLLLTSTDPEILI 149
DL + +N E D PFPK AVLQ+LRV++++LENC NK + E H LLL STD +++
Sbjct: 69 DLHIEENFEESDPPFPKDAVLQVLRVIRVVLENCTNKHFYSSYEQHLSLLLASTDADVVE 128

Query: 150 ATLETLSALVKINPSKLHGSGKLIGCGSVNGCLLSLAQGWGSKEEGLGLYSCVMANERTQ 209
A L+TL+A +K K I S+N L SLAQGWG KEEGLGL SC
Sbjct: 129 ACLQTLAAFLKRQIGKYS-----IRDASLNSKLFSLAQGWGGKEEGLGLTSCA------- 176

Query: 210 EEGLSLFPSDMENDRDKSQYRLGSTLYFELHGVNXXXXXXXXXXXXXNLSVIHITDLHLR 269
EN D+ +LG TL+FE + + L VIH+ D+ +
Sbjct: 177 ----------AENSCDQVSLQLGRTLHFEFYPSD-----ESPSELPGGLQVIHVPDVSIC 221

Query: 270 KEDDLLLMKQYIEQYNVPPELRFSLLTRIRYARAFRSPRICRLYSRICLLAFIVLVQSND 329
E DL L+ + + +NVPP LRF+LLTR+R+ARAF S + ++ I L AF+VLVQ++
Sbjct: 222 AESDLELLNKLVIDHNVPPSLRFALLTRMRFARAFSSLATRQQFTCIRLYAFVVLVQASG 281

Query: 330 AHDELVSFFANEPEYTNELIRIVRSEETVPGTIRTXXXXXXXXXXXXYSASHERARILSG 389
+ +VSFF EPE+ NEL+ +V E+TVP IR + S +R R +
Sbjct: 282 DTENVVSFFNGEPEFVNELVTLVSYEDTVPEKIRI------LCLLSLVALSQDRTRQPTV 335

Query: 390 SSINFAGGNRMILLNVLQRAVXXXXXXXXXXXXAFVEALLQFYLLHXXXXXXXXXXXXXX 449
+ +GG+R +L ++Q+A+ AF EALL L+
Sbjct: 336 LTAVTSGGHRGLLSGLMQKAIDSVVCITSKWSLAFAEALLS--LVTVLVSSSSGCSAMRE 393

Query: 450 XXMVPTFLPLLEDSDPTHMHLVCFAVKTLQKLMDYSSAAVSLFKDLGGVELLARRLQIEV 509
++PT +PL++D+DP H+HLV AV L+ MDYS+ A +LF+DLGG++ RL++EV
Sbjct: 394 AGLIPTLVPLIKDTDPQHLHLVSAAVHILEAFMDYSNPAAALFRDLGGLDDTIFRLKLEV 453

Query: 510 HRVIGLAGANDSSMIIGESSGYSDDQLYSQKRLIRV--------LLKALGSATYIPANST 561
R + S +S+G +QL + LI LL+A+ TY P N T
Sbjct: 454 SRTEDDVKEKNCS---SDSNGPDTEQLPYSEALISYHRRLLLKALLRAISLGTYAPGN-T 509

Query: 562 RSQNSHDNSLPVTLSLIFGNVEKFGGDIYFSAVTVMSEIIHKDPTCFSALHELGLPDAFL 621
S ++ LP L +IF + FGG ++ A TVMS++IHKDPTCF+AL GL FL
Sbjct: 510 NLYGSEESLLPECLCIIFRRAKDFGGGVFSLAATVMSDLIHKDPTCFNALDSAGLTSTFL 569

Query: 622 SSVVAGILPSSKALTCIPNGLGAICLNVKGLEAVKETSALRFLVDIFTTKKYVVAMN-EA 680
++ ++ S++A+TCIP L A+CLN GL+AVK+ +ALR V IFT+ Y+ A+ +
Sbjct: 570 DAISDEVICSAEAITCIPQCLDALCLNNSGLQAVKDRNALRCFVKIFTSPSYLRALTGDT 629

Query: 681 IVPLANAVEELLRHVSSLRSTGVDIIIEIVDRIASIG---DDNVGSSGKVNGTTA---ME 734
L++ ++ELLRH SSLR+ GVD+ IEI++ + IG + S V + A ME
Sbjct: 630 PGSLSSGLDELLRHQSSLRTYGVDMFIEILNSMLIIGSGMEATTSKSADVPTSAAPVPME 689

Query: 735 MDSEDKENDGHCCLVGSVDSAAEGISNEQFIQLCIFHVMVLVHRTMENSETCRLFVEKSG 794
+D ++K S D++ I E F+ C+ +V L ++N+E C LFVEK G
Sbjct: 690 IDVDEKSLAVSDEAEPSSDTSPANI--ELFLPDCVCNVARLFETVLQNAEVCSLFVEKKG 747

Query: 795 IEALLKLLLRPNIAQSSEGMSIALHSTMVFKGFTQHHSAPLARAFCSSLRDHLKKALTGF 854
I+A+L+L P + S+ S+ ++ FK F+ HSA LAR CS LR+HLKK
Sbjct: 748 IDAVLQLFSLPLMPLST---SLGQSFSVAFKNFSPQHSAGLARIVCSYLREHLKKTKILL 804

Query: 855 SVASGSFLLDPRLTPDSGIFPSXXXXXXXXXXAASKDN---RWVTALLTEFGNDSKDVLE 911
G+ L L +S I S N + ++++E DVL+
Sbjct: 805 VSIEGTQL----LKLESAIQTKILRSLSCLEGMLSLSNFLLKGSASVISELSAADADVLK 860

Query: 912 DIGRVQREVLWQIALLEDAKIETED--DGASSFAESQQSEPNANDSEEQRFNSFR-QFLD 968
++G ++ +WQ+AL D K + + D S + S S +S+E N+ ++ +
Sbjct: 861 ELGITYKQTIWQMALCNDTKEDEKKSVDRGSDNSVSASSSTAERESDEDSSNALAVRYTN 920

Query: 969 PL---LRRRMSGWSVESQFFDLLNLYRDLGRATGLQRLTADGSSNLRLGASHQLHHSASS 1025
P+ S W + +F ++ G+ T + +R G + + S +
Sbjct: 921 PVSIRSSSSQSIWGGDREFLSIVR------SGEGIHGRTRHAIARMRGGRTRRHLESFNF 974

Query: 1026 DST-----GVISKKEDEKQRSYYSSCCDMVRSLSFHITHLFQELGKAMLLP-RRRDDTLN 1079
DS V S + K++S +++ L+ + F L K RRR D +
Sbjct: 975 DSEIPADLPVTSSSHELKKKSTEVLIAEILNKLNCTLRFFFTALVKGFTSANRRRIDGAS 1034

Query: 1080 VSPSSKSVVSTFASIALDHMNFGGHVNPSGSEVSISTKCRYFGKVIDFIDGILLD-RPDS 1138
+S +SK++ + A + L+ +NF G+ +G E S+S KCRY GKV+D I + D R
Sbjct: 1035 LSSASKTLGTALAKVFLEALNFDGYGAAAGHEKSLSVKCRYLGKVVDDITFLSFDTRRRV 1094

Query: 1139 CNPVLVNCLYGHGVVQSVLTTFVATSQLLFTVNRA-PASPMETDDGISKQDEKDETDNS- 1196
C +VN Y HG + +LTTF ATSQLL+TV + PAS E + K E++ +S
Sbjct: 1095 CFTAMVNSFYVHGTFKELLTTFEATSQLLWTVPFSIPASSTENE----KPGERNIWSHSK 1150

Query: 1197 WIYGPLASYGKLMDHLVTSSFILSPFTK-HLLAQP----LINGDIPFPRDAETFVKVLQS 1251
W+ L +Y + +D+ V S+++LSP ++ LL QP L G P PR+ ETFV+ LQS
Sbjct: 1151 WLVDTLQNYCRALDYFVNSTYLLSPTSQTQLLVQPASVGLSIGLFPVPREPETFVRNLQS 1210

Query: 1252 MVLKVVLPVWTNPQFTDCSYDFXXXXXXXXXXXYSGV-----EVKNVNSNASARITGPPP 1306
VL V+LP+W +P F DC+ +F YSGV V + R
Sbjct: 1211 QVLDVILPIWNHPMFPDCNPNFVASVTSLVTHIYSGVVDARENRSGVTRGINQRALPLQL 1270

Query: 1307 NETAISTIVEMGFSRSRAEEALRQVGANSVELAMEWLFSHPEE-TQEDDELARALAMSLG 1365
+E+ + IVEMGFSRSRAE ALR+VG NSVE+AM+WLF++PE+ QEDDELA+ALA+SLG
Sbjct: 1271 DESIVGMIVEMGFSRSRAEIALRRVGTNSVEMAMDWLFTNPEQPVQEDDELAQALALSLG 1330

Query: 1366 NSGSDAKEEVANESTQHLEEEV-IQLPPVEELLSTCTKLLQMKEPLAFPVRDLLVMICSQ 1424
NS K E + +EE + PPV+E+++ KL Q + +AFP+ DL V +C++
Sbjct: 1331 NSSETPKLEDTEKPVDVPQEEAEPKEPPVDEVIAASVKLFQSDDSMAFPLMDLFVTLCNR 1390

Query: 1425 NDGQYRSSVITFIIDQMKLCSL--TSESGNVIMLSALFHVLALILHEDAVAREVAFKNGL 1482
N G+ R +++++I Q+KL L + ++G + M+ H+LAL+L ED RE+A ++G+
Sbjct: 1391 NKGEDRPKIVSYLIQQLKLVQLDFSKDTGALTMIP---HILALVLSEDDNTREIAAQDGI 1447

Query: 1483 VKLATDLLSRWDSGACDSEKPQVPKWVTAAFLAIDRLLQVDQKLNSELAEQLKKDDV--- 1539
V +A +L+ ++ + + PK ++A L + +LQ KL+SE E + +
Sbjct: 1448 VTVAIGILTDFNLKSESETEILAPKCISALLLVLSMMLQAQTKLSSEYVEGNQGGSLVPS 1507

Query: 1540 -SSQQTTITIDD---------DKQNKLQATLGLSPKHIDMHEQKRLIEIACNCIRNQLPS 1589
S Q +T + D + L+ G S ++ M E + + IAC I+ +P+
Sbjct: 1508 DSPQDSTAALKDALSSDVAKGESNQALELIFGKSTGYLTMEEGHKALLIACGLIKQHVPA 1567

Query: 1590 ETMHAVLQLCSTLTRTHSIAVNFLDDXXXXXXXXXXXXXXXXXXDNVAATIIRHVLEDPQ 1649
M AVLQLC+ LT++H++A+ FL++ D VA+ I+RH++EDPQ
Sbjct: 1568 MIMQAVLQLCARLTKSHALAIQFLENGGLSSLFNLPKKCCFPGYDTVASVIVRHLVEDPQ 1627

Query: 1650 TLQQAMESEIRHSLVAAANRHSNGRLTPRNFLLNLTSVISRDPMIFMQAAQSVCQVEMVG 1709
TLQ AME+EIR +L + RH GR+ PR FL + VISRDP++FM+A S CQ+E G
Sbjct: 1628 TLQIAMETEIRQTL--SGKRHI-GRVLPRTFLTTMAPVISRDPVVFMKAVASTCQLESSG 1684

Query: 1710 ERLYIVLLXXXXXXXXXXXXXXXXXXXXXXRNNDGKVTLGNASSIAPTGGHGKLTDPNSK 1769
R +++L ++ +L I+ KL D + K
Sbjct: 1685 GRDFVIL--------------SKEKEKPKVSGSEHGFSLNEPLGIS----ENKLHDVSGK 1726

Query: 1770 NSKVHRKPPQSFVNVIELLLDSVISFVPPSKDETVVNVPLDSPSLAAMDIDVAASKGKGK 1829
SK HR+ P +F+ VI+ L+D V+SF + E +L +M++D +K KGK
Sbjct: 1727 CSKSHRRVPANFIQVIDQLIDLVLSFPRVKRQED------GETNLISMEVDEPTTKVKGK 1780

Query: 1830 AIVTTPEENDFNN---------QEASASLAKIVFILKLLTEILLMYSSSVNVLLRKDAEV 1880
+ V PE+ + E S LA++ FILKLL++I+LMYS +V+LR+D E+
Sbjct: 1781 SKVGEPEKASSSRVGEPEKAEIPEKSEELARVTFILKLLSDIVLMYSHGTSVILRRDTEI 1840

Query: 1881 SGCRAP--PQRGPTVYCITGIFHHILHRFLPYSRNSKKEKKIDG--DWMHKLATRASQFL 1936
S R P P G+ +H++HR LP S +K G +W KL+ +AS FL
Sbjct: 1841 SQLRGSNLPDDSPGN---GGLIYHVIHRLLPISL-----EKFVGPEEWKEKLSEKASWFL 1892

Query: 1937 VAACVRSTEARRRVFTEISNILNDFV----DSSNGFRPPGNDIQAFIDLLNDVLAARSPT 1992
V C RS E R+R+ E+S +L+ F SS P + AF +L+ +L S +
Sbjct: 1893 VVLCSRSNEGRKRIINELSRVLSVFASLGRSSSKSVLLPDKRVLAFANLVYSILTKNSSS 1952

Query: 1993 ------GAYISAEASATFIDVGLVRSLTRTLQALDLDHVDSPKAVTGLIKALEVVTK--- 2043
G S + + + +D G ++ LT L +DLDH D+PK VT ++K+LE +T+
Sbjct: 1953 SSSNFPGCGCSPDVAKSMMDGGTIQCLTSILHVIDLDHPDAPKLVTLILKSLETLTRAAN 2012

Query: 2044 --EHVHSADSNTGKGENSTKPPDHNQPGRVDDSADVSQSMETSSQPNHDVTAADHVESFN 2101
E + S N K +S + D + ++ +++Q+ +S Q D ++
Sbjct: 2013 AAEQLKSEVPNEKKNRDSDERHDSHGNSTETEADELNQN-NSSLQQVTDAAGNGQEQAQV 2071

Query: 2102 TTQTYG--GSEAVTDDMEHDQDLDG 2124
++Q+ G GS + T M D ++G
Sbjct: 2072 SSQSAGERGS-SQTQAMPQDMRIEG 2095



Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/674 (62%), Positives = 504/674 (74%), Gaps = 13/674 (1%)

Query: 3023 HREC-DAHSVLLNLPQSELRLLCSLLAREGLSDNAYSLVAEVLKKLVAIAPTHCHLFITE 3081
+ C + +++ L LPQS+L LC LL EGLSD YSL EVLKKL A+ H F E
Sbjct: 3016 RKNCAEIYNIFLQLPQSDLCNLCILLGYEGLSDKIYSLAGEVLKKLAAVDVAHRKFFTKE 3075

Query: 3082 LAFSVQNLTKSAMDELHTFGETEKAXXXXXXXDGXXXXXXXXXXXXXXXXXNEKEKDQQV 3141
L+ +L+ S + EL T +K G +E +
Sbjct: 3076 LSELASSLSSSTVRELATLSSKQKMSRSTGSMAGASILRVLQVLSSLTSPIDESNVGTER 3135

Query: 3142 LPEKEQTAALSQVWDIHAALEPLWLELSTCISKIE---SYSDSATVLPXXXXXXXXKPSG 3198
E+E+ + + ++ ALEPLW ELS CIS E ++ +A+ + P+
Sbjct: 3136 ETEQEEQNIMQR---LNVALEPLWHELSQCISMTELQLDHTAAASNINPGDHVLGISPTS 3192

Query: 3199 AMPPLPAGSQNILPYIESFFVMCEKLHPGQPGASQDFSLAAVSDVEDASTSDGQQKTPVS 3258
++ P G+Q +LP IE+FFV+CEK+ P Q + +V+++S KT V
Sbjct: 3193 SLSP---GTQRLLPLIEAFFVLCEKIQ--TPSMLQQDTNVTAGEVKESSAHGSSSKTSVD 3247

Query: 3259 VLKVDEKHIAFVKFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRSKI 3318
K + + F KF+EKHR+LLN+FIRQNP LLEKS S+MLK PR IDFDNK+++FRS+I
Sbjct: 3248 SQKKTDGSVTFSKFAEKHRRLLNSFIRQNPSLLEKSLSMMLKAPRLIDFDNKKAYFRSRI 3307

Query: 3319 KHQHDHHHS-PLRISVRRAYILEDSYNQLRMRSTQDLKGRLTVHFQGEEGIDAGGLTREW 3377
+HQHD H S PLRISVRRAY+LEDSYNQLRMRS QDLKGRL V FQGEEGIDAGGLTREW
Sbjct: 3308 RHQHDQHISGPLRISVRRAYVLEDSYNQLRMRSPQDLKGRLNVQFQGEEGIDAGGLTREW 3367

Query: 3378 YQSLSRVIFDKGALLFTTVGNESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDV 3437
YQ LSRVIFDKGALLFTTVGN++TFQPNPNSVYQTEHLSYFKFVGR+V KALFDGQLLDV
Sbjct: 3368 YQLLSRVIFDKGALLFTTVGNDATFQPNPNSVYQTEHLSYFKFVGRMVAKALFDGQLLDV 3427

Query: 3438 HFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDITDVLDVTFSIDADEEKLILYE 3497
+FTRSFYKHILGVKVTYHDIEA+DPDY+KNLKW+LEND++D+LD+TFS+DADEEK ILYE
Sbjct: 3428 YFTRSFYKHILGVKVTYHDIEAVDPDYYKNLKWLLENDVSDILDLTFSMDADEEKHILYE 3487

Query: 3498 RNEVTDCELIPGGRNIRVTEDNKHKYVDLVAEHRLTTAIRPQINAFLEGFNELIPRDLIS 3557
+ EVTD EL PGGRNIRVTE+ KH+YVDLVA H LT AIRPQINAFLEGFNELIPR+L+S
Sbjct: 3488 KTEVTDYELKPGGRNIRVTEETKHEYVDLVAGHILTNAIRPQINAFLEGFNELIPRELVS 3547

Query: 3558 IFNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQSLSKEDKARLLQFV 3617
IFNDKELELLISGLP+ID DD++ANTEY+ Y+ SPVI WFWEVV++ SKED AR LQFV
Sbjct: 3548 IFNDKELELLISGLPEIDFDDLKANTEYTSYTAGSPVIHWFWEVVKAFSKEDMARFLQFV 3607

Query: 3618 TGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERL 3677
TGTSKVPLEGF ALQGISG Q+ QIHKAYG+P+ LPSAHTCFNQLDLPEY SK+ L+ERL
Sbjct: 3608 TGTSKVPLEGFKALQGISGPQRLQIHKAYGAPERLPSAHTCFNQLDLPEYQSKEQLQERL 3667

Query: 3678 LLAIHEANEGFGFG 3691
LLAIHEA+EGFGF
Sbjct: 3668 LLAIHEASEGFGFA 3681



Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/345 (46%), Positives = 203/345 (58%), Gaps = 18/345 (5%)

Query: 2554 TPLSGRDASLHSV--TEVSENPSQEADQVGPGEEQQINADADSGSIDPAFLDALPEELRA 2611
+PL G + L S+ TE N Q + G ++NA IDP FL+ALPE+LRA
Sbjct: 2570 SPLDGDNNELSSMEATENVRNDEQVEEGSLDGRAPEVNA------IDPTFLEALPEDLRA 2623

Query: 2612 EVLSAQQGQVAQPSNTEQQNTGDIDPEFLAALPPDIRAEVXXXXXXXXXXXXXELEGQPV 2671
EVL++QQ Q QP E DIDPEFLAALPPDI+ EV + +GQ V
Sbjct: 2624 EVLASQQAQSVQPPTYEPPPVDDIDPEFLAALPPDIQTEV--LAQQRAQRMVQQSQGQAV 2681

Query: 2672 EMDTVSIIATFPSDLREEVLLTSSDAILANLTPALVAEANMLRERFAHRYHNR-TLFGMY 2730
+MD SIIAT P+DLREEVLLTSS+A+LA L L+AEA MLR+R Y R ++FG
Sbjct: 2682 DMDNASIIATLPADLREEVLLTSSEAVLAALPSPLLAEAQMLRDRAMSHYQARSSVFGSS 2741

Query: 2731 HRNXXXXXXXXXXXXXXXLDRAGGSIVPRRSM-----GGKLVEADGAPLVDTEALKAMIR 2785
HR +DR G + +R++ G K+ E +G PLV+ +ALK++IR
Sbjct: 2742 HR-LNNRRNGLGYNRLTGMDRGVGVTIGQRAVSSSADGLKVKEIEGDPLVNADALKSLIR 2800

Query: 2786 LLRVVQPLYKGQLQRLLLNLCAHSETRIALVKXXXXXXXXXTRKPANHLNTSEPSYRLYA 2845
LLR+ QPL KG LQRLLLNLCAHS TR LV+ + L + P RLY
Sbjct: 2801 LLRLAQPLGKGLLQRLLLNLCAHSFTRANLVQLLLDMIRPEMETSPSELAITNPQ-RLYG 2859

Query: 2846 CQSHVMYSRPQYFDGVPPLVSRRILETMTYLARNHPYVAKILLQY 2890
CQS+V+Y R Q +G+PPLV RR+LE +TYLA NH VA +L +
Sbjct: 2860 CQSNVVYGRSQLLNGLPPLVFRRVLEVLTYLATNHSAVADMLFYF 2904

Query: CNT0006484
Subject: sp|O13834|PTR1_SCHPO E3 ubiquitin-protein ligase ptr1

OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=B11B22.010 PE=3 SV=4

 Score =  494 bits (1273), Expect = e-138,   Method: Compositional matrix adjust.
Identities = 248/535 (46%), Positives = 348/535 (65%), Gaps = 51/535 (9%)

Query: 3164 LWLELSTCISKIESYSDSATVLPXXXXXXXXKPSGAMPPLPAGSQNILPYIESFFVMCEK 3223
+W +LS C+S I + V + +LP IES V+C
Sbjct: 3586 MWDKLSACLSAIRQRDNMLNV----------------------ATILLPLIESLMVVC-- 3621

Query: 3224 LHPGQPGASQDFSLAAVSDVEDASTSDGQQKTPVSVLKVDEKHIA--FVKFSEKHRKLLN 3281
++ +L+ S V +A++ QK + E IA F F+E+HR++LN
Sbjct: 3622 ---------KNTTLSDASAVSNANS----QKEMLLTSPPPEDRIAGLFFTFTEEHRRILN 3668

Query: 3282 AFIRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRSKI--KHQHDHH-HSPLRISVRRAYI 3338
+R NP L+ +FSL++K P+ ++FDNKR++F + K+Q H PL++ VRR ++
Sbjct: 3669 ELVRHNPKLMSGTFSLLVKNPKVLEFDNKRNYFNRSVHSKYQQTRHSFPPLQLQVRREHV 3728

Query: 3339 LEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQSLSRVIFDKGALLFTTVG 3397
DS+ L + +LK G+L + FQGEEG+DAGG+TREW+Q LSR +FD +LF V
Sbjct: 3729 FHDSFRSLYYKKADELKFGKLNIRFQGEEGVDAGGVTREWFQVLSRQMFDPNYVLFVPVS 3788

Query: 3398 NE-STFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHD 3456
++ +TF PN S EHL +FKF+GR++GKAL++G+LL+ +F+R+ YK ILG V+ D
Sbjct: 3789 SDRTTFHPNKLSPINDEHLPFFKFIGRIIGKALYEGRLLECYFSRAVYKRILGKPVSVKD 3848

Query: 3457 IEAIDPDYFKNLKWMLENDITDVLDVTFSIDADEEKLILYERNEVTDCELIPGGRNIRVT 3516
+E+ DPDY+K+L WMLENDITD++ TFS++ D EV +LI GRNI VT
Sbjct: 3849 MESFDPDYYKSLVWMLENDITDIITETFSVEDDV-------FGEVKVVDLIENGRNIPVT 3901

Query: 3517 EDNKHKYVDLVAEHRLTTAIRPQINAFLEGFNELIPRDLISIFNDKELELLISGLPDIDL 3576
E+NKH+YV L+ EH+L T+++ Q+ AFL GF+E+IP +LI+IFN++ELELLISGLPDID+
Sbjct: 3902 EENKHEYVRLIVEHKLITSVKDQMKAFLTGFHEIIPEELIAIFNEQELELLISGLPDIDI 3961

Query: 3577 DDMRANTEYSGYSPASPVIQWFWEVVQSLSKEDKARLLQFVTGTSKVPLEGFSALQGISG 3636
DD +ANTEY YS +P IQWFW V+S KE+ A+LLQFVTGTSKVPL GF L+G++G
Sbjct: 3962 DDWKANTEYHNYSAGAPQIQWFWRAVRSFDKEELAKLLQFVTGTSKVPLNGFKELEGMNG 4021

Query: 3637 SQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEANEGFGFG 3691
+F IH+ YGS D LPS+HTCFNQLDLPEY + + L +LL AI ++ FGF
Sbjct: 4022 VSRFNIHRDYGSKDRLPSSHTCFNQLDLPEYENYETLRSQLLKAITAGSDYFGFA 4076



Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 35/261 (13%)

Query: 2571 ENPSQEADQVGPG-----EEQQINADADSGSIDPAFLDALPEELRAEVL----SAQQGQV 2621
EN Q+A+ P QQI D ID +L+ALPEE R EV+ S ++ Q
Sbjct: 2947 ENAEQQAEDERPRVYYTLRNQQI--DITELGIDAEYLEALPEEFRDEVIAQAISTRRSQA 3004

Query: 2622 AQPSNTEQQNTGDIDPEFLAALPPDIRAEVXXXXXXXXXXXXXE--LEGQ---PVEMDTV 2676
+ + E +NT ++ EFL ALP ++R E+ + GQ P +MD
Sbjct: 3005 REQVSQEGENT-EVFQEFLEALPEELRNEILHQEQHEQRRRERQNAAGGQDLGPADMDPA 3063

Query: 2677 SIIATFPSDLREEVLLTSSDAILANLTPALVAEANMLRERFAHRYHNRTLFGMYHRNXXX 2736
SI+ TFP LR++VLL + I+ +L P L AEA L R HR H
Sbjct: 3064 SILLTFPPGLRQQVLLDQGEDIMEHLGPELAAEARTLVAR--HR--------QLHAQQGG 3113

Query: 2737 XXXXXXXXXXXXLDRAGGSIVPRRSMGGKLVEADGAPLVDTEALKAMIRLLRVVQP-LYK 2795
+ G++ K+ + ++D + + ++RL+ V Q +
Sbjct: 3114 QAASRSRDAQRPTEAGAGTV-------QKIQKRTVVQMLDKQGIATLLRLMFVSQQGSIR 3166

Query: 2796 GQLQRLLLNLCAHSETRIALV 2816
L + NLC + + R+ ++
Sbjct: 3167 SSLFSIFANLCENRQNRLDVI 3187



Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 3/93 (3%)

Query: 627 GILPSSKALTCIPNGLGAICLNVKGLEAVKETSALRFLVDIFTTKKYVVAMN---EAIVP 683
GILPSS+++ IP L +I LN +G++ V + A++ ++IF + +V M E
Sbjct: 815 GILPSSESMNIIPTVLNSISLNNRGMKMVLSSGAIQSYMEIFESATHVQCMAHDPELAST 874

Query: 684 LANAVEELLRHVSSLRSTGVDIIIEIVDRIASI 716
+ ++++EL RH +LR + II+++ R+ +
Sbjct: 875 IGSSLDELSRHHPALRPAIANAIIDMIARVTHL 907

Query: CNT0006484
Subject: sp|Q756G2|TOM1_ASHGO Probable E3 ubiquitin-protein ligase TOM1

OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ptr1 PE=1 SV=1

 Score =  464 bits (1195), Expect = e-129,   Method: Compositional matrix adjust.
Identities = 231/531 (43%), Positives = 336/531 (63%), Gaps = 54/531 (10%)

Query: 3164 LWLELSTCISKIESYSDSATVLPXXXXXXXXKPSGAMPPLPAGSQNILPYIESFFVMCEK 3223
LW LS C+S + ++ V S +LP IES V+C
Sbjct: 2748 LWEVLSECLSALRDHTSITHV----------------------STVLLPLIESLMVICRL 2785

Query: 3224 LHPGQPGASQDFSLAAVSDVEDASTSDGQQKTPVSVLKVDEKHIAFVKFSEKHRKLLNAF 3283
+ P ED G+ +P+ ++ F+ F+E+HRK++N
Sbjct: 2786 VFIELP--------------EDV----GKHISPI----LERFKTLFISFTEEHRKIINMM 2823

Query: 3284 IRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRSKIKHQH-DHHHSPLRISVRRAYILEDS 3342
+ P L+ SFSL++K P+ ++F+NKR++F ++ + + PL I+VRR ++ DS
Sbjct: 2824 VFTTPSLMSGSFSLLVKNPKVLEFENKRNYFNRQLHEEAAKEQYPPLNITVRRDHVFLDS 2883

Query: 3343 YNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTREWYQSLSRVIFDKGALLFTTV-GNES 3400
Y L + ++K +L +HF+ EEG+DAGG+TREW Q L+R +F+ LF V G+ +
Sbjct: 2884 YRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFLPVTGDAT 2943

Query: 3401 TFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQLLDVHFTRSFYKHILGVKVTYHDIEAI 3460
TF PN +S +HLS+FKF GR++GKAL+DG+LLD HF+R+ YKH+L V+ DIE++
Sbjct: 2944 TFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIESL 3003

Query: 3461 DPDYFKNLKWMLENDITDVLDVTFSIDADEEKLILYERNEVTDCELIPGGRNIRVTEDNK 3520
DPDY+K+L WML NDITD++ F+++ D E T +LIP GRNI VTE NK
Sbjct: 3004 DPDYYKSLVWMLNNDITDIITEEFAVEKDV-------FGEKTVVDLIPNGRNIPVTELNK 3056

Query: 3521 HKYVDLVAEHRLTTAIRPQINAFLEGFNELIPRDLISIFNDKELELLISGLPDIDLDDMR 3580
YV+ + +++L +++ Q+ + L+GF+++IP LI IFN++ELELLISGLP+ID+DD +
Sbjct: 3057 QNYVNRMVDYKLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQELELLISGLPEIDIDDWK 3116

Query: 3581 ANTEYSGYSPASPVIQWFWEVVQSLSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKF 3640
NTEY GY+ +SP +QWFW V+S +E++A+LLQF TGTSKVPL GF L+G+SG Q+F
Sbjct: 3117 NNTEYHGYNVSSPQVQWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSGFQRF 3176

Query: 3641 QIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLEERLLLAIHEANEGFGFG 3691
IHK+YGS + LP +HTCFNQLDLPEY + + L LL AI+E +EGFGF
Sbjct: 3177 NIHKSYGSLNRLPQSHTCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFGFA 3227



Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 29/454 (6%)

Query: 276 LMKQYIEQYNVPPELRFSLLTRIRYARAFRSPRICRLYSRICLLAFIVLVQSNDAHDELV 335
L+ + + +P + F LL + + RL RI LLA LV AH + V
Sbjct: 243 LLVKTLHDNQIPEQYSFDLLVSLMLRQNLYDINRRRLMIRIGLLALSNLVY---AHSQAV 299

Query: 336 S--FFANEPEYTNELIRIVRSEETVPGTIRTXXXXXXXXXXXXYSASHERARILSGSSIN 393
F +PE T L +V + +P + S +L+ +++
Sbjct: 300 QTRFLIADPEITTHLANLVSPDVDLPQNFKAVCFECFKAFFFKKSMI---PSVLASLNVS 356

Query: 394 FAGGNRMILLNVLQRAVXXXXXXXXXXXXAFVEALLQFYLLHXXXXXXXXXXXXXXXXMV 453
+ G +++N+++ +V++ F L +
Sbjct: 357 VSYG---LMMNLVRDFSKNLENPNFYYEREYVDSFYDF--LQFMTSSPLGGNMACSAGLT 411

Query: 454 PTFLPLLEDSDPTHMHLVCFAVKTLQKLMDYSSAAVSLFKDLGGVELLARRLQIEVHRVI 513
L P ++V ++ L L+D S A F + G+++L R+Q E+
Sbjct: 412 SLLGYHLSVKTPQATYVVARSIVMLDHLIDGYSMAFPDFSESKGLDMLVDRVQYELEA-- 469

Query: 514 GL----AGANDSSMIIGESSGYSDDQLYSQKRLIRVLLKALGSATYIPANSTRSQNSHDN 569
GL +G + +++ S D+ + K L++ +L + S + +N D+
Sbjct: 470 GLQDIKSGKGNPEIVLNMDYAISYDRYFLLKNLLKFVLHLIQSGGSV----VELRNLIDS 525

Query: 570 SLPVTLSLIFGNVEKFGGDIYFSAVTVMSEIIHKDPTCFSALHELGLPDAFLSSVVAGIL 629
SL +L+ + + E +G +++ S +MS IH +PTC+ +HE L AFL +V IL
Sbjct: 526 SLISSLAFLLEHHEVYGSNLFASTTNIMSTFIHNEPTCYGIIHEKKLSHAFLDAVNRKIL 585

Query: 630 PSSKALTCIPNGLGAICLNVKGLEAVKETSALRFLVDIFTT----KKYVVAMNEAIVPLA 685
SS A+T IP GAICLN +G + E + + L IFT+ K + + N AI L
Sbjct: 586 NSSDAITSIPLAFGAICLNSQGFDLFLEKNPIPQLFSIFTSLNHCKSLISSDNAAI--LG 643

Query: 686 NAVEELLRHVSSLRSTGVDIIIEIVDRIASIGDD 719
++EL+RH SL+ V +I + D+++++ D+
Sbjct: 644 TYIDELMRHQPSLKDPIVKMIFKACDQVSALLDN 677



Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 21/117 (17%)

Query: 2543 TRRTNVSFGNSTPLSGRDASLHSVTEVSENPSQEADQVGPGEEQQI------NADADSGS 2596
TR+ V+ P++ D E + EA+++G +E + D S
Sbjct: 2216 TRQPEVNIQPEEPINTSDM---------EGVTTEANEIGSYQEPSLINIRGREVDVSSLG 2266

Query: 2597 IDPAFLDALPEELRAEVL--SAQQGQVAQPSNTEQQNTGDIDPEFLAALPPDIRAEV 2651
IDP FL ALPEE+R EV+ Q+ + S++ ++ IDP FL LP D+R E+
Sbjct: 2267 IDPTFLLALPEEMREEVVFQHIQERHMESISDSSRR----IDPSFLEVLPSDLRDEL 2319

Query: CNT0006484
Subject: sp|Q03280|TOM1_YEAST E3 ubiquitin-protein ligase TOM1

OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
9923 / NRRL Y-1056) GN=TOM1 PE=3 SV=2

 Score =  460 bits (1183), Expect = e-128,   Method: Compositional matrix adjust.
Identities = 241/557 (43%), Positives = 343/557 (61%), Gaps = 61/557 (10%)

Query: 3144 EKEQTAALSQVWDIHAALE--PLWLELSTCISKIESYSDSATVLPXXXXXXXXKPSGAMP 3201
+KE+ + Q+ ++ +E +W+ LS C+++ E P
Sbjct: 2754 KKEEEQVVDQLLPLYNKMELGHIWVSLSNCLTRFEE----------------------KP 2791

Query: 3202 PLPAGSQNILPYIESFFVMCEKLHPGQPGASQDFSLAAVSDVEDASTSDGQQK-----TP 3256
+ + +LP IES V+C+ + V + +DA +K TP
Sbjct: 2792 RMSTSATILLPLIESLMVVCKH--------------SKVRETKDALLKYEAKKCDFARTP 2837

Query: 3257 VSVLKVDEKHIAFVKFSEKHRKLLNAFIRQNPGLLEKSFSLMLKVPRFIDFDNKRSHFRS 3316
V L F F++ H+KLLN IR NP L+ FSL++K P+ +DFDNKR +F +
Sbjct: 2838 VENL--------FFAFTDLHKKLLNEMIRSNPKLMSGPFSLLVKNPKILDFDNKRYYFTA 2889

Query: 3317 KIKHQHDHHHSPLRISVRRAYILEDSYNQLRMRSTQDLK-GRLTVHFQGEEGIDAGGLTR 3375
+++ H L ISVRR ++ DSY L +S +D+K +L + F+GE G+DAGG+TR
Sbjct: 2890 QLR-AITHDRPKLSISVRREHVFLDSYRSLFFKSNEDIKISKLEISFKGEAGVDAGGITR 2948

Query: 3376 EWYQSLSRVIFDKGALLFTTVG-NESTFQPNPNSVYQTEHLSYFKFVGRVVGKALFDGQL 3434
EWYQ LSR +F+ LF V +++TF+PN S EHLS+FKF+G ++GKA+ D
Sbjct: 2949 EWYQVLSRQMFNPDYALFIPVASDKTTFRPNRTSGINPEHLSFFKFIGMIIGKAISDQCF 3008

Query: 3435 LDVHFTRSFYKHILGVKVTYHDIEAIDPDYFKNLKWMLENDITDVLDVTFSIDADEEKLI 3494
LD HF+R YK+ILG V D+E++D DY+K+L W+LENDITD+++ TFS++ D+
Sbjct: 3009 LDCHFSREVYKNILGKPVALKDMESLDLDYYKSLIWILENDITDIIEETFSVETDD---- 3064

Query: 3495 LYERNEVTDCELIPGGRNIRVTEDNKHKYVDLVAEHRLTTAIRPQINAFLEGFNELIPRD 3554
Y ++V ELI G ++ VTE NKH YV + E++L T+++ Q+ FL+GF +IP+D
Sbjct: 3065 -YGEHKV--IELIENGAHVAVTEQNKHDYVKKIVEYKLQTSVKDQMENFLQGFYAIIPKD 3121

Query: 3555 LISIFNDKELELLISGLPDIDLDDMRANTEYSGYSPASPVIQWFWEVVQSLSKEDKARLL 3614
LISIF+++ELELL+SGLPDID+DD + NT Y Y+P I +FW V+S KE++A+LL
Sbjct: 3122 LISIFDEQELELLVSGLPDIDVDDWKNNTIYVNYTPTCKQINYFWRAVRSFDKEERAKLL 3181

Query: 3615 QFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSPDHLPSAHTCFNQLDLPEYPSKQHLE 3674
QFVTGTSKVPL GF L G++G KF IH+ YGS D LPS+HTCFNQLDLP Y S + L
Sbjct: 3182 QFVTGTSKVPLNGFKELSGVNGISKFSIHRDYGSIDRLPSSHTCFNQLDLPAYDSYETLR 3241

Query: 3675 ERLLLAIHEANEGFGFG 3691
LLLAI+E +EGFG
Sbjct: 3242 GSLLLAINEGHEGFGIA 3258



Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 2/157 (1%)

Query: 562 RSQNSHDNSLPVTLSLIFGNVEKFGGDIYFSAVTVMSEIIHKDPTCFSALHELGLPDAFL 621
R +N D+ + + + I N FG + A+ V+ II+ +PT + L E G L
Sbjct: 530 RIRNLIDSPILLAFNKILENRPVFGYTLVSHALDVVQTIINTEPTIYQVLVESGTIPYIL 589

Query: 622 SSVVAGILPSSKALTCIPNGLGAICLNVKGLEAVKETSALRFLVDIFTTKKY--VVAMNE 679
+ + P+S L +P + AICLN GL+ VKE + L++L + T ++ +++ +
Sbjct: 590 QNFDQFLGPTSDLLCMLPEVISAICLNTDGLKQVKEKNLLKYLFQVIKTPEFAKILSWED 649

Query: 680 AIVPLANAVEELLRHVSSLRSTGVDIIIEIVDRIASI 716
V A++EL RH L+ D V + S+
Sbjct: 650 QAVNYGVALDELARHYPELKPLIEDYFAATVKELPSL 686