SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0010398 S. tuberosum 8:52505292-52505616 (-) noncoding (-1.26227)- 45 0 Confident lncRNA
CNT0010397 S. tuberosum 8:50815622-50816741 (-) noncoding (-0.337518)- 151 0 Confident lncRNA
CNT0010396 S. tuberosum 8:51978260-51979532 (-) noncoding (-0.880048)- 37 0.373 Confident lncRNA
CNT0010395 S. tuberosum 8:52029217-52029542 (-) noncoding (-1.15615)- - 19.865 Confident lncRNA
CNT0010394 S. tuberosum 8:7513761-7514151 (-) noncoding (-0.870167)- 100 0.648 Confident lncRNA
CNT0010393 S. tuberosum 8:20571193-20571652 (+) noncoding (-1.1495)0.000000000002 (sp|B9DHT4|ARIA_ARATH) 55 0.471 splicing regulationConfident lncRNA
CNT0010392 S. tuberosum 8:52222358-52224916 (+) noncoding (-0.90219)- 104 67.578 Confident lncRNA
CNT0010391 S. tuberosum 8:33345333-33347705 (-) coding (1.10983)2e-52 (sp|B9DFX7|HMA8_ARATH) 147 25.231 Confident lncRNA
CNT0010390 S. tuberosum 8:41313168-41313822 (-) noncoding (-0.920154)- 62 16.966 Confident lncRNA
CNT0010389 S. tuberosum 8:41312572-41313822 (-) noncoding (-1.02485)- 71 0 Confident lncRNA
CNT0010388 S. tuberosum 8:41313168-41313822 (-) noncoding (-0.947871)- 78 16.362 Confident lncRNA
CNT0010387 S. tuberosum 8:1111047-1138292 (-) noncoding (-0.218474)1e-120 (sp|Q9FJR0|RENT1_ARATH) 184 3.291 Confident lncRNA
CNT0010386 S. tuberosum 8:1111047-1138291 (-) noncoding (-0.218753)4e-120 (sp|Q9FJR0|RENT1_ARATH) 183 3.297 Confident lncRNA
CNT0010385 S. tuberosum 8:1111047-1113683 (-) coding (4.84033)4e-120 (sp|Q9FJR0|RENT1_ARATH) 183 3.297 Confident lncRNA
CNT0010384 S. tuberosum 8:2364413-2365493 (-) noncoding (-1.23137)0.000007 (sp|Q9SV15|WRK11_ARATH) 67 0 Confident lncRNA
CNT0010383 S. tuberosum 8:5696684-5698243 (+) noncoding (-0.924252)- 57 2.683 Confident lncRNA
CNT0010382 S. tuberosum 8:5745583-5746294 (+) noncoding (-1.02306)- 173 12.272 Confident lncRNA
CNT0010381 S. tuberosum 8:5696643-5698243 (+) noncoding (-0.667373)- 111 0.811 Confident lncRNA
CNT0010380 S. tuberosum 8:48972212-48978183 (+) noncoding (-1.1704)0.000000006 (sp|P54162|RNHL_BACSU) 47 7.006 splicing regulationConfident lncRNA
CNT0010379 S. tuberosum 8:48972813-48978183 (+) noncoding (-1.28339)0.000000007 (sp|P54162|RNHL_BACSU) 46 4.063 splicing regulationConfident lncRNA
CNT0010378 S. tuberosum 8:48972212-48978183 (+) noncoding (-1.1067)- 47 11.904 Confident lncRNA
CNT0010377 S. tuberosum 8:19554299-19555308 (-) noncoding (-1.2206)- 37 0.359 Confident lncRNA
CNT0010376 S. tuberosum 8:19570624-19572521 (-) noncoding (-0.0756401)- 214 1.978 Confident lncRNA
CNT0010375 S. tuberosum 8:5207012-5213476 (-) noncoding (-0.983724)- 106 3.671 Confident lncRNA
CNT0010374 S. tuberosum 8:44001283-44086703 (-) coding (1.13298)0 (sp|P54772|DCHS_SOLLC) 467 41.381 Low-confidence lncRNA
CNT0010373 S. tuberosum 8:44001283-44086703 (-) coding (1.15789)0 (sp|P54772|DCHS_SOLLC) 467 53.795 Low-confidence lncRNA
CNT0010372 S. tuberosum 8:44001283-44086703 (-) coding (1.12463)0 (sp|P54772|DCHS_SOLLC) 467 57.933 Low-confidence lncRNA
CNT0010371 S. tuberosum 8:44001283-44086703 (-) coding (1.05998)0 (sp|P54772|DCHS_SOLLC) 467 27.915 Low-confidence lncRNA
CNT0010370 S. tuberosum 8:43943502-43944063 (-) noncoding (-0.931996)0.000007 (sp|P54772|DCHS_SOLLC) 97 0 Confident lncRNA
CNT0010369 S. tuberosum 8:43939789-43944063 (-) noncoding (-0.910826)0.000007 (sp|P54772|DCHS_SOLLC) 97 0 Confident lncRNA
CNT0010368 S. tuberosum 8:43997500-44021977 (-) noncoding (-1.12474)- 43 84.755 Confident lncRNA
CNT0010367 S. tuberosum 8:43943502-44026057 (-) noncoding (-0.890717)0.000007 (sp|P54772|DCHS_SOLLC) 113 0 Confident lncRNA
CNT0010366 S. tuberosum 8:51367140-51367604 (-) noncoding (-1.27221)- - 1.067 splicing regulationConfident lncRNA
CNT0010365 S. tuberosum 8:48238444-48303504 (-) noncoding (-1.15759)0.00001 (sp|Q84SN3|CDKF3_ORYSJ) 112 5.048 splicing regulationConfident lncRNA
CNT0010364 S. tuberosum 8:48238444-48249124 (-) noncoding (-1.15839)0.00001 (sp|Q84SN3|CDKF3_ORYSJ) 112 5.024 splicing regulationConfident lncRNA
CNT0010363 S. tuberosum 8:18629031-18632741 (+) noncoding (-0.996911)- 60 0.264 Confident lncRNA
CNT0010362 S. tuberosum 8:19055728-19056881 (+) noncoding (-0.882185)- 62 12.324 Confident lncRNA
CNT0010361 S. tuberosum 8:38064040-38065157 (-) noncoding (-0.586102)3e-16 (sp|O49318|Y2317_ARATH) 115 0 Confident lncRNA
CNT0010360 S. tuberosum 8:38109496-38109978 (-) noncoding (-1.37199)0.000000004 (sp|P93101|CDC2_OXYRB) 45 0 Confident lncRNA
CNT0010359 S. tuberosum 8:49546232-49547540 (-) noncoding (-0.718103)- 86 29.872 Confident lncRNA
CNT0010358 S. tuberosum 8:6045270-6233004 (+) noncoding (-1.41303)2e-19 (sp|Q41238|LOX16_SOLTU) 64 0 Confident lncRNA
CNT0010357 S. tuberosum 8:6045256-6138289 (+) noncoding (-0.907699)5e-59 (sp|Q43190|LOX14_SOLTU) 97 216.59 Confident lncRNA
CNT0010356 S. tuberosum 8:6045256-6181388 (+) noncoding (-1.24993)8e-42 (sp|O22508|LOX18_SOLTU) 43 674.997 Confident lncRNA
CNT0010355 S. tuberosum 8:6045256-6188804 (+) noncoding (-1.21143)- - 0 Confident lncRNA
CNT0010354 S. tuberosum 8:6045256-6188918 (+) noncoding (-1.20293)8e-29 (sp|O22508|LOX18_SOLTU) 31 872.86 Confident lncRNA
CNT0010353 S. tuberosum 8:5448476-5455816 (+) noncoding (-0.866822)0.000009 (sp|Q0IH10|MARH3_XENLA) 185 9.725 Confident lncRNA
CNT0010352 S. tuberosum 8:49084431-49089849 (+) coding (1.36853)5e-68 (sp|Q2YDC9|PDCD2_BOVIN) 424 11.461 Low-confidence lncRNA
CNT0010351 S. tuberosum 8:3084121-3090998 (-) coding (0.722399)9e-58 (sp|Q9LYT3|TT12_ARATH) 345 8.409 Low-confidence lncRNA
CNT0010350 S. tuberosum 8:2930036-2938305 (-) coding (0.0484958)6e-95 (sp|Q9LYT3|TT12_ARATH) 443 1.244 Confident lncRNA
CNT0010349 S. tuberosum 8:56669844-56673539 (-) noncoding (-0.424085)- 460 0.256 Confident lncRNA