SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0009598 S. tuberosum 7:12665075-12675600 (+) coding (0.00100183)- 192 7.784 Confident lncRNA
CNT0009597 S. tuberosum 7:12645785-12675600 (+) noncoding (-1.05377)- 51 2.071 Confident lncRNA
CNT0009596 S. tuberosum 7:12645454-12675600 (+) noncoding (-0.880659)- 78 6.131 Confident lncRNA
CNT0009595 S. tuberosum 7:7905291-7905774 (+) noncoding (-1.20348)0.000005 (sp|O04196|ISOA1_ARATH) 102 0 Confident lncRNA
CNT0009594 S. tuberosum 7:7840766-7841018 (-) noncoding (-0.959004)- 34 0 splicing regulationConfident lncRNA
CNT0009593 S. tuberosum 7:7962903-7966149 (-) noncoding (-1.24612)5e-34 (sp|Q9ZPX1|ARF5_ARATH) 44 5.567 Confident lncRNA
CNT0009592 S. tuberosum 7:53009048-53028728 (-) noncoding (-1.33231)- 39 1.01 splicing regulationConfident lncRNA
CNT0009591 S. tuberosum 7:18955949-18956656 (-) noncoding (-1.28623)- 50 0 Confident lncRNA
CNT0009590 S. tuberosum 7:41516172-41519410 (-) noncoding (-1.11379)- 54 4.226 Confident lncRNA
CNT0009589 S. tuberosum 7:7836822-7846368 (+) noncoding (-0.0731187)0.00001 (sp|Q9XFX3|CARDA_CYNCA) 164 0 splicing regulationConfident lncRNA
CNT0009588 S. tuberosum 7:7966592-7966819 (+) noncoding (-1.09907)6e-21 (sp|Q9ZPX1|ARF5_ARATH) 37 2.902 Confident lncRNA
CNT0009587 S. tuberosum 7:7838283-7841428 (+) noncoding (-1.17574)- 33 0 splicing regulationConfident lncRNA
CNT0009586 S. tuberosum 7:7902521-7903315 (+) noncoding (-1.31639)2e-16 (sp|O04196|ISOA1_ARATH) 43 0.245 Confident lncRNA
CNT0009585 S. tuberosum 7:50932741-50933033 (+) noncoding (-1.3493)0.000000002 (sp|O49354|COQ3_ARATH) - 0 Confident lncRNA
CNT0009584 S. tuberosum 7:55086208-55090053 (+) noncoding (-0.0106216)- 388 106.843 splicing regulationConfident lncRNA
CNT0009583 S. tuberosum 7:43424039-43427704 (+) noncoding (-0.514763)0.00000004 (sp|A7HM36|RL18_FERNB) 118 57.674 Confident lncRNA
CNT0009582 S. tuberosum 7:46604195-46632081 (-) noncoding (-0.653554)- 58 0 splicing regulationConfident lncRNA
CNT0009581 S. tuberosum 7:29593203-29605694 (+) coding (2.52365)6e-24 (sp|B8BDQ4|TOP6B_ORYSI) 76 0.948 Confident lncRNA
CNT0009580 S. tuberosum 7:29593206-29593971 (+) noncoding (-0.736967)- 39 1.296 Confident lncRNA
CNT0009579 S. tuberosum 7:46930582-46931825 (+) coding (2.39182)5e-39 (sp|Q9NVH0|EXD2_HUMAN) 341 8.467 Low-confidence lncRNA
CNT0009578 S. tuberosum 7:11792599-11797971 (+) noncoding (-1.12165)2e-34 (sp|Q9FV71|E2FB_ARATH) 98 15.896 Confident lncRNA
CNT0009577 S. tuberosum 7:11792599-11797971 (+) noncoding (-1.12117)2e-34 (sp|Q9FV71|E2FB_ARATH) 98 15.943 Confident lncRNA
CNT0009576 S. tuberosum 7:11792599-11797971 (+) noncoding (-1.10674)1e-34 (sp|Q9FV71|E2FB_ARATH) 98 14.124 Confident lncRNA
CNT0009575 S. tuberosum 7:2290077-2300255 (+) noncoding (-0.555989)7e-52 (sp|P40940|ARF3_ARATH) 120 36.033 Low-confidence lncRNA
CNT0009574 S. tuberosum 7:2290077-2299729 (+) noncoding (-0.304073)6e-46 (sp|P40940|ARF3_ARATH) 156 35.082 splicing regulationLow-confidence lncRNA
CNT0009573 S. tuberosum 7:2290008-2300255 (+) noncoding (-0.0156735)3e-108 (sp|P40940|ARF3_ARATH) 182 78.339 Low-confidence lncRNA
CNT0009572 S. tuberosum 7:19658695-19663388 (-) noncoding (-0.836442)1e-28 (sp|B2GUV7|IF2P_RAT) 64 0.392 Low-confidence lncRNA
CNT0009571 S. tuberosum 7:19658695-19663388 (-) noncoding (-0.824197)1e-28 (sp|B2GUV7|IF2P_RAT) 65 0.282 Confident lncRNA
CNT0009570 S. tuberosum 7:41190830-41191235 (-) noncoding (-0.772749)- 83 0 Confident lncRNA
CNT0009569 S. tuberosum 7:19337716-19338337 (-) noncoding (-1.31067)- 30 15.973 Confident lncRNA
CNT0009568 S. tuberosum 7:56511315-56512558 (-) coding (0.121593)6e-75 (sp|Q9SK55|NAC42_ARATH) 174 0.209 Low-confidence lncRNA
CNT0009567 S. tuberosum 7:53770788-53771083 (+) noncoding (-1.14043)0.000000000002 (sp|Q8L6Y1|UBP14_ARATH) 40 0 Confident lncRNA
CNT0009566 S. tuberosum 7:29334192-29339877 (-) noncoding (-1.14835)- 57 2.905 Confident lncRNA
CNT0009565 S. tuberosum 7:29339277-29339849 (-) noncoding (-0.936981)- 55 7.959 Confident lncRNA
CNT0009564 S. tuberosum 7:29334062-29336508 (-) noncoding (-1.15211)- 64 2.647 Confident lncRNA
CNT0009563 S. tuberosum 7:29231878-29233207 (-) noncoding (-1.20396)- - 0 Confident lncRNA
CNT0009562 S. tuberosum 7:29231878-29249230 (-) noncoding (-1.1486)- - 0 Confident lncRNA
CNT0009561 S. tuberosum 7:33687948-33689533 (-) noncoding (-0.867374)2e-37 (sp|Q42551|SCE1_ARATH) 77 0.663 Confident lncRNA
CNT0009560 S. tuberosum 7:1968339-1977143 (-) coding (1.05186)0 (sp|P93690|SECY_SPIOL) 165 16.179 Low-confidence lncRNA
CNT0009559 S. tuberosum 7:2121004-2138926 (-) noncoding (-0.268877)0.0000000001 (sp|O80322|RNS1_PYRPY) 162 19.896 Confident lncRNA
CNT0009558 S. tuberosum 7:2121357-2138926 (-) noncoding (-0.981596)- 98 21.953 Confident lncRNA
CNT0009557 S. tuberosum 7:49005928-49009803 (+) noncoding (-0.954142)- 91 0 Confident lncRNA
CNT0009556 S. tuberosum 7:48928904-48929597 (+) noncoding (-1.26117)- 56 3.338 Confident lncRNA
CNT0009555 S. tuberosum 7:48366312-48371057 (+) noncoding (-0.77406)- 83 157.716 Confident lncRNA
CNT0009554 S. tuberosum 7:48354883-48371057 (+) noncoding (-0.7705)- 82 132.385 Confident lncRNA
CNT0009553 S. tuberosum 7:53009048-53017406 (+) noncoding (-1.08171)- 47 0 splicing regulationConfident lncRNA
CNT0009552 S. tuberosum 7:53011274-53026016 (+) noncoding (-0.843125)6e-33 (sp|Q9FN32|YIPL7_ARATH) 98 1.876 Low-confidence lncRNA
CNT0009551 S. tuberosum 7:53011274-53026503 (+) noncoding (-0.362589)1e-47 (sp|Q9FN32|YIPL7_ARATH) 129 2.374 Low-confidence lncRNA
CNT0009550 S. tuberosum 7:53016447-53022068 (+) noncoding (-0.761025)- 76 1.745 Confident lncRNA
CNT0009549 S. tuberosum 7:53027224-53032493 (+) noncoding (-1.01348)- 44 2.365 Confident lncRNA