SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0016298 S. tuberosum 1:4601849-4602750 (+) noncoding (-1.21725)0.0000000000003 (sp|Q9S9N9|CCR1_ARATH) 73 0 splicing regulationConfident lncRNA
CNT0016297 S. tuberosum 1:4601307-4624468 (+) noncoding (-1.25365)0.00000000000009 (sp|Q9S9N9|CCR1_ARATH) 57 0 Confident lncRNA
CNT0016296 S. tuberosum 1:4591905-4592669 (+) noncoding (-0.981891)- 88 0.433 Confident lncRNA
CNT0016295 S. tuberosum 1:4529844-4530439 (+) noncoding (-0.662767)- 76 24.07 Confident lncRNA
CNT0016294 S. tuberosum 1:4652853-4653422 (+) noncoding (-1.15994)- 56 11.361 Confident lncRNA
CNT0016293 S. tuberosum 1:4607220-4607481 (+) noncoding (-0.928345)0.000000000004 (sp|Q500U8|TKPR1_ARATH) 50 33.349 Confident lncRNA
CNT0016292 S. tuberosum 1:84445925-84452849 (+) noncoding (-0.599271)3e-66 (sp|Q8S944|DRP3A_ARATH) 73 5.394 Low-confidence lncRNA
CNT0016291 S. tuberosum 1:84445925-84452849 (+) noncoding (-0.56498)3e-46 (sp|Q8S944|DRP3A_ARATH) 73 4.185 Low-confidence lncRNA
CNT0016290 S. tuberosum 1:81483239-81497855 (-) noncoding (-0.736826)1e-51 (sp|P38548|RAN_VICFA) 77 478.345 Confident lncRNA
CNT0016289 S. tuberosum 1:68315804-68316184 (+) noncoding (-0.827705)- 53 22.933 splicing regulationConfident lncRNA
CNT0016288 S. tuberosum 1:68317550-68318008 (+) noncoding (-1.18448)- 36 0 Confident lncRNA
CNT0016287 S. tuberosum 1:68318067-68319047 (+) noncoding (-0.836563)- 56 8.907 Confident lncRNA
CNT0016286 S. tuberosum 1:68319211-68321136 (+) noncoding (-1.21259)- 50 3.362 Confident lncRNA
CNT0016285 S. tuberosum 1:68321680-68322711 (+) noncoding (-0.972055)- 67 8.467 splicing regulationConfident lncRNA
CNT0016284 S. tuberosum 1:68347916-68350076 (+) noncoding (-0.00546383)4e-44 (sp|O64792|PIGP_ARATH) 172 1.141 Low-confidence lncRNA
CNT0016283 S. tuberosum 1:70282144-70285829 (-) noncoding (-1.02533)0.00000003 (sp|Q84WW5|VAP13_ARATH) 53 9.34 Confident lncRNA
CNT0016282 S. tuberosum 1:64078206-64089781 (+) coding (2.32905)1e-115 (sp|Q5MAU8|PPA27_ARATH) 643 0.576 Low-confidence lncRNA
CNT0016281 S. tuberosum 1:20122952-20123228 (-) noncoding (-1.40873)- - 0 Confident lncRNA
CNT0016280 S. tuberosum 1:1181015-1241856 (+) noncoding (-0.659103)- 100 0 Confident lncRNA
CNT0016279 S. tuberosum 1:2097931-2100668 (-) noncoding (-1.13923)2e-168 (sp|Q39202|RLK1_ARATH) 99 0.06 splicing regulationConfident lncRNA
CNT0016278 S. tuberosum 1:2097931-2119506 (-) noncoding (-1.13361)3e-167 (sp|Q39202|RLK1_ARATH) 99 0.066 splicing regulationConfident lncRNA
CNT0016277 S. tuberosum 1:4283132-4297292 (+) noncoding (-0.972751)- 109 0 Confident lncRNA
CNT0016276 S. tuberosum 1:1181025-1241856 (+) noncoding (-0.566799)0.0000000005 (sp|Q8BKC5|IPO5_MOUSE) 120 8.934 Confident lncRNA
CNT0016275 S. tuberosum 1:4299888-4300788 (+) noncoding (-0.622385)- 113 14.277 Confident lncRNA
CNT0016274 S. tuberosum 1:1181025-1222483 (+) noncoding (-0.330805)7e-20 (sp|O00410|IPO5_HUMAN) 188 0.795 Confident lncRNA
CNT0016273 S. tuberosum 1:1180789-1241856 (+) noncoding (-0.582009)8e-18 (sp|Q8BKC5|IPO5_MOUSE) 191 8.235 Confident lncRNA
CNT0016272 S. tuberosum 1:77931865-77933839 (-) noncoding (-0.831147)8e-16 (sp|Q6P642|DNJB6_XENTR) 97 16.071 Confident lncRNA
CNT0016271 S. tuberosum 1:43332677-43341835 (+) noncoding (-1.24995)- 42 3.101 Confident lncRNA
CNT0016270 S. tuberosum 1:64526504-64540791 (+) noncoding (-1.37796)2e-33 (sp|Q7G191|ALDO4_ARATH) 51 0 splicing regulationConfident lncRNA
CNT0016269 S. tuberosum 1:84682198-84686384 (+) coding (0.767086)6e-46 (sp|Q9ZQR3|Y2451_ARATH) 504 0.129 splicing regulationLow-confidence lncRNA
CNT0016268 S. tuberosum 1:57846130-57847416 (-) noncoding (-1.1951)- 59 0 Confident lncRNA
CNT0016267 S. tuberosum 1:69570475-69591438 (-) noncoding (-1.31224)- 76 9.201 splicing regulationConfident lncRNA
CNT0016266 S. tuberosum 1:76184430-76186761 (-) coding (0.362821)7e-22 (sp|P70698|PYRG1_MOUSE) 66 13.279 splicing regulationConfident lncRNA
CNT0016265 S. tuberosum 1:69570475-69591438 (-) noncoding (-1.31203)- 76 9.256 splicing regulationConfident lncRNA
CNT0016264 S. tuberosum 1:69503258-69504491 (-) noncoding (-0.593928)9e-18 (sp|Q8L9K1|ERF99_ARATH) 222 114.888 Confident lncRNA
CNT0016263 S. tuberosum 1:76181196-76183496 (-) noncoding (-0.985221)0.0000001 (sp|F4JN26|MLH3_ARATH) 69 0.141 Confident lncRNA
CNT0016262 S. tuberosum 1:69503258-69504491 (-) noncoding (-0.568217)8e-18 (sp|Q8L9K1|ERF99_ARATH) 228 104.452 Confident lncRNA
CNT0016261 S. tuberosum 1:44395115-44407098 (-) noncoding (-0.33036)- 188 11.763 Confident lncRNA
CNT0016260 S. tuberosum 1:44397099-44407105 (-) noncoding (-0.93974)- 87 13.736 Confident lncRNA
CNT0016259 S. tuberosum 1:44429855-44432816 (-) noncoding (-0.392073)- 151 9.399 Confident lncRNA
CNT0016258 S. tuberosum 1:60942562-60943318 (-) coding (1.68083)3e-82 (sp|Q10L32|MSRB5_ORYSJ) 136 0 Low-confidence lncRNA
CNT0016257 S. tuberosum 1:82253649-82254210 (-) noncoding (-1.06784)- 63 2.429 Confident lncRNA
CNT0016256 S. tuberosum 1:79267560-79271448 (-) coding (2.58703)4e-32 (sp|Q9C811|NU160_ARATH) 218 5.228 Low-confidence lncRNA
CNT0016255 S. tuberosum 1:60421994-60426719 (-) coding (0.505295)3e-42 (sp|Q8GXC7|FBK50_ARATH) 368 6.685 Low-confidence lncRNA
CNT0016254 S. tuberosum 1:80859775-80859983 (+) noncoding (-1.33081)- 44 0 splicing regulationConfident lncRNA
CNT0016253 S. tuberosum 1:74701887-74702345 (+) noncoding (-1.13037)- 36 0 Confident lncRNA
CNT0016252 S. tuberosum 1:77445405-77445817 (+) noncoding (-1.2027)- - 0.719 Confident lncRNA
CNT0016251 S. tuberosum 1:4383141-4385740 (+) noncoding (-1.09439)- 85 3.605 splicing regulationConfident lncRNA
CNT0016250 S. tuberosum 1:76010479-76014845 (-) noncoding (-0.853806)- 78 14.249 Confident lncRNA
CNT0016249 S. tuberosum 1:40911505-40920437 (+) noncoding (-0.556455)2e-23 (sp|F4JUU5|S2P_ARATH) 187 1.016 Low-confidence lncRNA