SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0015798 S. tuberosum 00:41123437-41124602 (+) noncoding (-0.732707)- 116 10.043 Confident lncRNA
CNT0015797 S. tuberosum 00:40870579-40872338 (+) noncoding (-0.944287)- 81 1.989 Confident lncRNA
CNT0015796 S. tuberosum 00:25704925-25707852 (-) noncoding (-1.11283)8e-18 (sp|F6HDT7|MTND2_VITVI) 49 8.135 Confident lncRNA
CNT0015795 S. tuberosum 00:18951037-18960341 (-) coding (1.81898)3e-38 (sp|O82265|SCC3_ARATH) 137 75.846 Confident lncRNA
CNT0015794 S. tuberosum 00:18951578-18952537 (-) coding (1.39888)3e-30 (sp|O82265|SCC3_ARATH) 93 0 Confident lncRNA
CNT0015793 S. tuberosum 00:18953448-18953864 (-) noncoding (-1.08891)- 63 1.829 Confident lncRNA
CNT0015792 S. tuberosum 00:18953448-18956995 (-) coding (1.62879)1e-40 (sp|P14673|ADH1_SOLTU) 43 0.624 Confident lncRNA
CNT0015791 S. tuberosum 00:18924943-18926942 (-) noncoding (-1.39206)- - 2.533 Confident lncRNA
CNT0015790 S. tuberosum 00:18924943-18926959 (-) noncoding (-1.40197)- - 0.477 Confident lncRNA
CNT0015789 S. tuberosum 00:18927022-18937135 (-) coding (0.444142)0.0000000000008 (sp|A2C629|SYK_PROM3) 126 0 Confident lncRNA
CNT0015788 S. tuberosum 00:18937335-18937778 (-) noncoding (-0.982159)- 64 0 Confident lncRNA
CNT0015787 S. tuberosum 00:18953448-18958558 (-) noncoding (-1.06247)- 49 1.718 Confident lncRNA
CNT0015786 S. tuberosum 00:18955067-18955808 (-) noncoding (-0.98833)0.0000001 (sp|O82265|SCC3_ARATH) 45 107.934 Confident lncRNA
CNT0015785 S. tuberosum 00:30883689-30886001 (-) noncoding (-1.22756)- 86 0.37 splicing regulationConfident lncRNA
CNT0015784 S. tuberosum 00:41337934-41339554 (-) coding (2.01896)2e-51 (sp|B6SFA4|MAA3_ARATH) 324 2.208 Confident lncRNA
CNT0015783 S. tuberosum 00:41437898-41438615 (-) coding (2.31504)2e-63 (sp|Q42521|DCE1_ARATH) 93 16.393 Confident lncRNA
CNT0015782 S. tuberosum 00:41844167-41845201 (-) noncoding (-0.883724)0.000001 (sp|Q6L3Z4|R1B12_SOLDE) 64 1.141 Confident lncRNA
CNT0015781 S. tuberosum 00:34410513-34413868 (-) noncoding (-0.501244)0.00000000000003 (sp|Q9Z324|DPM2_MOUSE) 94 0 Confident lncRNA
CNT0015780 S. tuberosum 00:34410513-34413901 (-) noncoding (-0.914188)2e-20 (sp|Q9Z324|DPM2_MOUSE) 63 1.406 Confident lncRNA
CNT0015779 S. tuberosum 00:32814566-32822088 (+) noncoding (-1.23136)0.000003 (sp|P0C2F6|RNHX1_ARATH) 134 3.908 Confident lncRNA
CNT0015778 S. tuberosum 00:32814566-32822088 (+) noncoding (-1.25338)0.000008 (sp|P0C2F6|RNHX1_ARATH) 134 3.932 Confident lncRNA
CNT0015777 S. tuberosum 00:23081941-23088754 (+) coding (4.96379)2e-174 (sp|Q01412|E13A_SOLLC) 284 14.672 Low-confidence lncRNA
CNT0015776 S. tuberosum 00:23081948-23083633 (+) coding (0.810124)4e-25 (sp|Q01412|E13A_SOLLC) 80 36.105 Confident lncRNA
CNT0015775 S. tuberosum 00:23061758-23079100 (+) noncoding (-0.684605)7e-112 (sp|Q01412|E13A_SOLLC) 154 102.492 Low-confidence lncRNA
CNT0015774 S. tuberosum 00:23064721-23069940 (+) coding (0.381491)5e-32 (sp|Q01412|E13A_SOLLC) 76 0 Confident lncRNA
CNT0015773 S. tuberosum 00:23064721-23083633 (+) noncoding (-0.950453)5e-32 (sp|Q01412|E13A_SOLLC) 76 0 Confident lncRNA
CNT0015772 S. tuberosum 00:23061867-23067054 (+) coding (3.46634)3e-142 (sp|Q01412|E13A_SOLLC) 246 0 Confident lncRNA
CNT0015771 S. tuberosum 00:23064721-23066268 (+) coding (0.658435)6e-36 (sp|Q01412|E13A_SOLLC) 84 34.264 Confident lncRNA
CNT0015770 S. tuberosum 00:29363129-29368357 (+) noncoding (-1.20512)0.00000000003 (sp|P20346|DF322_SOLTU) 71 6.306 splicing regulationConfident lncRNA
CNT0015769 S. tuberosum 00:29369628-29370730 (+) noncoding (-1.36848)- 36 1.238 splicing regulationConfident lncRNA
CNT0015768 S. tuberosum 00:40750355-40752505 (+) noncoding (-0.957304)- 94 6.245 miRNA-associatedConfident lncRNA
CNT0015767 S. tuberosum 00:40750355-40751411 (+) noncoding (-0.810175)- 58 26.325 Confident lncRNA
CNT0015766 S. tuberosum 00:25478658-25479097 (-) noncoding (-0.775263)2e-35 (sp|A6YIH8|C7D55_HYOMU) 52 0 splicing regulationConfident lncRNA
CNT0015765 S. tuberosum 00:40901025-40902947 (-) noncoding (-0.569418)- 141 1.49 Confident lncRNA
CNT0015764 S. tuberosum 00:40901025-40902947 (-) noncoding (-0.582056)- 167 1.268 Confident lncRNA
CNT0015763 S. tuberosum 00:40901025-40901510 (-) noncoding (-1.09164)- 83 2.159 Confident lncRNA
CNT0015762 S. tuberosum 00:41032341-41033596 (-) coding (0.224354)- 228 9.265 Confident lncRNA
CNT0015761 S. tuberosum 00:5305861-5311157 (-) noncoding (-1.19093)- 38 23.592 Confident lncRNA
CNT0015760 S. tuberosum 00:5305861-5311157 (-) noncoding (-1.15396)- 38 27.021 Confident lncRNA
CNT0015759 S. tuberosum 00:5235157-5235468 (-) noncoding (-1.11855)- 36 4.259 Confident lncRNA
CNT0015758 S. tuberosum 00:5305861-5311157 (-) noncoding (-1.09542)- 36 10.345 Confident lncRNA
CNT0015757 S. tuberosum 00:5305861-5311157 (-) noncoding (-1.07234)- 36 6.442 Confident lncRNA
CNT0015756 S. tuberosum 00:5305221-5310598 (-) noncoding (-1.24517)- 60 4.364 Confident lncRNA
CNT0015755 S. tuberosum 00:32925656-32926832 (+) coding (1.22523)3e-27 (sp|Q94AY1|NADB_ARATH) 89 0 Low-confidence lncRNA
CNT0015754 S. tuberosum 00:32923692-32925173 (+) noncoding (-0.950445)0.000002 (sp|O80725|AB4B_ARATH) 74 2.322 Confident lncRNA
CNT0015753 S. tuberosum 00:32814721-32822088 (+) noncoding (-1.3127)0.000007 (sp|P0C2F6|RNHX1_ARATH) 82 3.925 Confident lncRNA
CNT0015752 S. tuberosum 00:32814721-32822088 (+) noncoding (-1.27943)0.000007 (sp|P0C2F6|RNHX1_ARATH) 82 4.135 Confident lncRNA
CNT0015751 S. tuberosum 00:13589816-13590265 (+) noncoding (-0.972086)- 72 0 Confident lncRNA
CNT0015750 S. tuberosum 00:13588833-13589285 (+) noncoding (-0.805331)- 109 0 Confident lncRNA
CNT0015749 S. tuberosum 00:13592219-13592559 (+) noncoding (-1.41846)- - 0 Confident lncRNA