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lncRNA id
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Found 8594 records in
Oryza sativa

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
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Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0031316 O. sativa 3:34090593-34090836 (+) noncoding (-1.01734)- 30 0 Confident lncRNA
CNT0031315 O. sativa 3:34039038-34045065 (+) noncoding (-0.930576)- 115 48.119 Confident lncRNA
CNT0031314 O. sativa 3:34039087-34045065 (+) noncoding (-1.00524)- 53 37.552 Confident lncRNA
CNT0031313 O. sativa 3:10235214-10240451 (-) noncoding (-1.07862)- 77 4.337 Confident lncRNA
CNT0031312 O. sativa 3:11838821-11841217 (+) noncoding (-0.0352745)4e-46 (sp|Q9SAK5|APL_ARATH) 323 21.962 splicing regulationLow-confidence lncRNA
CNT0031311 O. sativa 3:906073-906466 (-) noncoding (-1.05134)- 78 0 Confident lncRNA
CNT0031310 O. sativa 3:498743-499679 (-) noncoding (-0.845714)9e-28 (sp|Q9FFB3|VP241_ARATH) 131 2.892 splicing regulationConfident lncRNA
CNT0031309 O. sativa 3:2562730-2575332 (+) noncoding (-1.47868)- 40 0.618 Confident lncRNA
CNT0031308 O. sativa 3:3646974-3651593 (+) noncoding (-0.150071)0 (sp|Q10R93|RMR1_ORYSJ) 533 33.257 Low-confidence lncRNA
CNT0031307 O. sativa 3:3646918-3651593 (+) noncoding (-0.620835)0 (sp|Q10R93|RMR1_ORYSJ) 324 33.706 Low-confidence lncRNA
CNT0031306 O. sativa 3:35433121-35434380 (+) noncoding (-1.098)2e-66 (sp|O04486|RAA2A_ARATH) 47 0 splicing regulationConfident lncRNA
CNT0031305 O. sativa 3:35431602-35432500 (+) noncoding (-1.20761)- 54 4.685 Confident lncRNA
CNT0031304 O. sativa 3:24701123-24702098 (+) noncoding (-1.25013)5e-53 (sp|Q9S9Q9|Y1044_ARATH) 166 0.233 Confident lncRNA
CNT0031303 O. sativa 3:23149858-23150677 (-) noncoding (-0.660622)- 158 0 Confident lncRNA
CNT0031302 O. sativa 3:716644-719260 (-) noncoding (-0.776301)0 (sp|Q0DVU4|C3H20_ORYSJ) 110 0.821 miRNA-associatedConfident lncRNA
CNT0031301 O. sativa 3:30008614-30010225 (-) noncoding (-1.3195)- 71 0.182 splicing regulationConfident lncRNA
CNT0031300 O. sativa 3:1970948-1972185 (-) noncoding (-1.34119)- 53 2.773 Confident lncRNA
CNT0031299 O. sativa 3:1990403-1995991 (-) noncoding (-1.18843)- 109 1.035 Confident lncRNA
CNT0031298 O. sativa 3:1990403-1995991 (-) noncoding (-1.179)- 109 1.218 Confident lncRNA
CNT0031297 O. sativa 3:5955405-5957941 (-) noncoding (-0.746275)3e-29 (sp|Q84JB8|RUS3_ARATH) 73 7.368 splicing regulationConfident lncRNA
CNT0031296 O. sativa 3:30994371-30996921 (-) noncoding (-1.11514)- 95 12.62 Confident lncRNA
CNT0031295 O. sativa 3:31007188-31008009 (-) noncoding (-1.2454)0 (sp|Q10CQ8|PHYC_ORYSJ) 71 0 splicing regulationConfident lncRNA
CNT0031294 O. sativa 3:34469161-34473224 (-) noncoding (-1.37802)- 67 3.202 Confident lncRNA
CNT0031293 O. sativa 3:19543486-19544074 (-) noncoding (-0.808156)0.00000001 (sp|Q8LQH4|LBD6_ORYSJ) 75 3.37 Confident lncRNA
CNT0031292 O. sativa 3:12231277-12232985 (+) noncoding (-1.15747)- 110 40.392 Confident lncRNA
CNT0031291 O. sativa 3:12227515-12227912 (+) noncoding (-0.891303)- 84 8.971 Confident lncRNA
CNT0031290 O. sativa 3:9727380-9728025 (+) noncoding (-1.18237)- 45 0 Confident lncRNA
CNT0031289 O. sativa 3:28258615-28259781 (+) noncoding (-1.14248)- 35 0 splicing regulationConfident lncRNA
CNT0031288 O. sativa 3:28258629-28259781 (+) noncoding (-1.04532)- 36 0.275 splicing regulationConfident lncRNA
CNT0031287 O. sativa 3:23019545-23019755 (+) noncoding (-1.30973)- - 0 Confident lncRNA
CNT0031286 O. sativa 3:23076780-23077959 (+) noncoding (-1.33335)- 44 5.043 Confident lncRNA
CNT0031285 O. sativa 3:23076793-23077959 (+) noncoding (-1.23838)- 44 13.031 Confident lncRNA
CNT0031284 O. sativa 3:25537419-25538175 (-) noncoding (-0.963963)- 90 5.881 miRNA-associatedConfident lncRNA
CNT0031283 O. sativa 3:25563594-25564429 (-) noncoding (-0.0414857)- 163 5.108 splicing regulationConfident lncRNA
CNT0031282 O. sativa 3:35335224-35335627 (-) noncoding (-0.933729)- 48 2.946 Confident lncRNA
CNT0031281 O. sativa 3:34215410-34218731 (+) noncoding (-1.19424)4e-18 (sp|P49216|RS26_ORYSJ) 88 5.918 Confident lncRNA
CNT0031280 O. sativa 3:34215410-34218731 (+) noncoding (-1.22308)5e-18 (sp|P49216|RS26_ORYSJ) 68 4.395 Confident lncRNA
CNT0031279 O. sativa 3:5386337-5387266 (+) noncoding (-1.0678)- 44 6.101 Confident lncRNA
CNT0031278 O. sativa 3:33371523-33373201 (+) noncoding (-1.1509)3e-25 (sp|Q851R2|MEL1_ORYSJ) 71 0 splicing regulationConfident lncRNA
CNT0031277 O. sativa 3:9849457-9849805 (+) noncoding (-1.19733)3e-21 (sp|A2XFC8|MPK5_ORYSI) 114 0.492 splicing regulationConfident lncRNA
CNT0031276 O. sativa 3:9849591-9850194 (+) noncoding (-1.208)3e-44 (sp|A2XFC8|MPK5_ORYSI) 69 0.464 splicing regulationConfident lncRNA
CNT0031275 O. sativa 3:15159219-15159493 (-) noncoding (-1.00352)- 43 0 Confident lncRNA
CNT0031274 O. sativa 3:14869717-14869962 (-) noncoding (-1.16443)- - 0 Confident lncRNA
CNT0031273 O. sativa 3:16574400-16576701 (-) noncoding (-1.16996)4e-18 (sp|Q9FX01|HSDD1_ARATH) 51 0.432 splicing regulationConfident lncRNA
CNT0031272 O. sativa 3:16574400-16576980 (-) noncoding (-1.17662)6e-34 (sp|Q67ZE1|HSDD2_ARATH) 51 1.008 splicing regulationConfident lncRNA
CNT0031271 O. sativa 3:16593756-16595071 (-) noncoding (-1.16576)2e-157 (sp|Q7Y0E8|NRX11_ORYSJ) 56 0.234 splicing regulationConfident lncRNA
CNT0031270 O. sativa 3:16593756-16631212 (-) noncoding (-1.17186)5e-134 (sp|Q7Y0E8|NRX11_ORYSJ) 56 0.446 Confident lncRNA
CNT0031269 O. sativa 3:18109111-18112195 (-) noncoding (-1.18504)- 65 9.77 Confident lncRNA
CNT0031268 O. sativa 3:32711829-32712223 (-) noncoding (-1.13074)- 42 0 Confident lncRNA
CNT0031267 O. sativa 3:6095363-6096998 (+) noncoding (-1.32496)- 55 0.728 Confident lncRNA