SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 4403 records in
Zea mays

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0020153 Z. mays 2:6719170-6720116 (-) noncoding (-1.25037)- - 0.094 splicing regulationConfident lncRNA
CNT0020152 Z. mays 2:202620999-202621218 (-) noncoding (-1.20289)- - 11.146 splicing regulationConfident lncRNA
CNT0020151 Z. mays 2:231193297-231194388 (-) noncoding (-1.40374)7e-27 (sp|Q0WQ57|AUXI2_ARATH) 89 2.618 splicing regulationConfident lncRNA
CNT0020150 Z. mays 2:188511756-188512821 (-) noncoding (-0.18437)0.0000000001 (sp|Q8GU89|PDR4_ORYSJ) 48 1.157 Confident lncRNA
CNT0020149 Z. mays 2:188442104-188463084 (-) noncoding (-0.862305)0.0000003 (sp|Q8H930|ARAE1_ORYSJ) 40 0 Confident lncRNA
CNT0020148 Z. mays 2:188442104-188463083 (-) noncoding (-0.908469)0.0000003 (sp|Q8H930|ARAE1_ORYSJ) 40 0 Confident lncRNA
CNT0020147 Z. mays 2:228546601-228547428 (+) noncoding (-1.14906)0.000002 (sp|Q9SII0|H2AV2_ARATH) 68 1.48 splicing regulationConfident lncRNA
CNT0020146 Z. mays 2:24567862-24569183 (+) noncoding (-1.15498)0.0000000000008 (sp|Q9FZ89|Y1815_ARATH) 49 1.262 splicing regulationConfident lncRNA
CNT0020145 Z. mays 2:24552236-24569183 (+) noncoding (-1.2255)0.0000000000004 (sp|Q9FZ89|Y1815_ARATH) 118 0.46 splicing regulationConfident lncRNA
CNT0020144 Z. mays 2:24507797-24508303 (+) noncoding (-1.3704)- - 0.499 Confident lncRNA
CNT0020143 Z. mays 2:31778587-31781257 (-) noncoding (-1.17459)- 83 0.719 splicing regulationConfident lncRNA
CNT0020142 Z. mays 2:31779496-31781856 (-) noncoding (-1.13156)- 83 1.383 splicing regulationConfident lncRNA
CNT0020141 Z. mays 2:194144576-194147902 (-) noncoding (-1.25753)- 46 0.633 splicing regulationConfident lncRNA
CNT0020140 Z. mays 2:194276682-194276976 (-) noncoding (-1.13927)- 98 6.168 splicing regulationConfident lncRNA
CNT0020139 Z. mays 2:171091969-171092677 (+) noncoding (-1.05937)0.000004 (sp|A0QLV3|Y4764_MYCA1) 76 3.65 Confident lncRNA
CNT0020138 Z. mays 2:10997812-11003801 (+) noncoding (-1.12104)7e-25 (sp|Q8RXR2|CLCF_ARATH) 67 0 splicing regulationConfident lncRNA
CNT0020137 Z. mays 2:10997808-11003801 (+) noncoding (-1.0961)4e-27 (sp|Q8RXR2|CLCF_ARATH) 69 0 splicing regulationConfident lncRNA
CNT0020136 Z. mays 2:205148252-205148957 (-) noncoding (-1.05167)- 102 0.46 Confident lncRNA
CNT0020135 Z. mays 2:210752499-210753989 (+) noncoding (-1.12191)7e-17 (sp|F4J9M5|CHR12_ARATH) 104 0 splicing regulationConfident lncRNA
CNT0020134 Z. mays 2:179625181-179625934 (+) noncoding (-1.03715)- 39 24.841 Confident lncRNA
CNT0020133 Z. mays 2:112456009-112461026 (+) noncoding (-1.31314)- 59 3.477 splicing regulationConfident lncRNA
CNT0020132 Z. mays 2:43403199-43409370 (-) coding (1.02239)2e-31 (sp|Q9M4U5|HDT2_MAIZE) 62 0.238 Confident lncRNA
CNT0020131 Z. mays 2:38829844-38830506 (+) noncoding (-1.00661)- 113 5.617 Confident lncRNA
CNT0020130 Z. mays 2:40589645-40590714 (-) noncoding (-1.30393)- 44 1.248 Confident lncRNA
CNT0020129 Z. mays 2:43403199-43409370 (-) coding (1.0682)1e-31 (sp|Q9M4U5|HDT2_MAIZE) 125 0.681 Confident lncRNA
CNT0020128 Z. mays 2:43403199-43409370 (-) coding (1.03729)2e-31 (sp|Q9M4U5|HDT2_MAIZE) 76 1 Confident lncRNA
CNT0020127 Z. mays 2:25008238-25009254 (+) noncoding (-1.16358)- 85 0 Confident lncRNA
CNT0020126 Z. mays 2:108006100-108013179 (-) noncoding (-0.825716)5e-20 (sp|Q5QMN5|RDR3_ORYSJ) 126 13.825 Low-confidence lncRNA
CNT0020125 Z. mays 2:19868633-19870780 (-) noncoding (-1.34255)- 36 0.057 Confident lncRNA
CNT0020124 Z. mays 2:170443327-170443560 (+) noncoding (-1.06119)- 36 8.514 splicing regulationConfident lncRNA
CNT0020123 Z. mays 2:183782625-183829249 (+) noncoding (-1.14984)- 105 0.73 splicing regulationConfident lncRNA
CNT0020122 Z. mays 2:183782788-183785312 (+) noncoding (-1.23636)- 51 0.857 splicing regulationConfident lncRNA
CNT0020121 Z. mays 2:183782808-183784428 (+) noncoding (-0.913929)- 57 0.621 splicing regulationConfident lncRNA
CNT0020120 Z. mays 2:228554027-228642962 (-) noncoding (-1.12396)1e-26 (sp|C7AU21|D27_ORYSJ) 85 0.671 splicing regulationConfident lncRNA
CNT0020119 Z. mays 2:63640084-63640401 (+) noncoding (-1.23475)0.00000003 (sp|O23627|SYGM1_ARATH) 61 0 Confident lncRNA
CNT0020118 Z. mays 2:55287897-55291119 (-) noncoding (-1.38755)- 92 1.377 Confident lncRNA
CNT0020117 Z. mays 2:75546785-75547474 (-) noncoding (-1.44158)- 47 3.29 Confident lncRNA
CNT0020116 Z. mays 2:75563914-75564244 (-) noncoding (-1.34969)- 34 0 Confident lncRNA
CNT0020115 Z. mays 2:125558143-125558445 (-) noncoding (-1.05354)- 42 0 Confident lncRNA
CNT0020114 Z. mays 2:125177622-125178348 (-) noncoding (-1.301)0.000000000005 (sp|Q6NY98|MCE1_DANRE) 54 4.263 splicing regulationConfident lncRNA
CNT0020113 Z. mays 2:113572486-113573376 (+) noncoding (-1.28621)- - 0.267 Confident lncRNA
CNT0020112 Z. mays 2:204686554-204687255 (-) noncoding (-1.37888)5e-16 (sp|O65570|VILI4_ARATH) 35 1.931 splicing regulationConfident lncRNA
CNT0020111 Z. mays 2:11413749-11416480 (-) coding (2.19824)2e-55 (sp|Q7X7E9|DNLI4_ORYSJ) 92 5.084 Confident lncRNA
CNT0020110 Z. mays 2:227704027-228056411 (+) noncoding (-0.905332)6e-24 (sp|Q8RXY0|Y3333_ARATH) 59 4.858 Confident lncRNA
CNT0020109 Z. mays 2:25669806-25688010 (+) noncoding (-1.48766)- - 0 splicing regulationConfident lncRNA
CNT0020108 Z. mays 2:203708639-203710431 (+) noncoding (-1.25946)- 60 1.485 splicing regulationConfident lncRNA
CNT0020107 Z. mays 2:16021412-16025547 (-) noncoding (-1.21386)- 138 4.837 splicing regulationConfident lncRNA
CNT0020106 Z. mays 2:132715685-132717434 (+) noncoding (-1.11385)- 71 5.776 Confident lncRNA
CNT0020105 Z. mays 2:95379819-95381312 (-) noncoding (-1.2847)8e-22 (sp|A2XQX0|ARP9_ORYSI) 42 37.229 Confident lncRNA
CNT0020104 Z. mays 2:18479510-18485235 (-) noncoding (-1.19209)- 130 1.884 splicing regulationConfident lncRNA