SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 8594 records in
Oryza sativa

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0031266 O. sativa 3:29128183-29134431 (-) noncoding (-1.25174)0 (sp|Q6ASW7|SIZ2_ORYSJ) 72 0.063 splicing regulationConfident lncRNA
CNT0031265 O. sativa 3:14927013-14928295 (+) noncoding (-1.01479)2e-79 (sp|Q7PC73|CSLA5_ORYSJ) 69 1.402 splicing regulationConfident lncRNA
CNT0031264 O. sativa 3:13504687-13505329 (+) noncoding (-1.16435)- 122 1.543 splicing regulationConfident lncRNA
CNT0031263 O. sativa 3:26460016-26461158 (-) noncoding (-0.995961)- 86 0.925 splicing regulationConfident lncRNA
CNT0031262 O. sativa 3:26779936-26780229 (-) noncoding (-1.47407)- - 0 Confident lncRNA
CNT0031261 O. sativa 3:28048482-28054242 (-) noncoding (-1.19951)- 52 2.649 Confident lncRNA
CNT0031260 O. sativa 3:28048482-28054264 (-) noncoding (-1.02042)1e-57 (sp|Q76I22|LOX1_ORYSJ) 113 2.018 splicing regulationConfident lncRNA
CNT0031259 O. sativa 3:8410048-8411355 (-) noncoding (-0.997167)3e-43 (sp|P0CH07|RL402_SCHPO) 52 0 Confident lncRNA
CNT0031258 O. sativa 3:8411691-8412075 (-) noncoding (-1.0811)- 43 0 Confident lncRNA
CNT0031257 O. sativa 3:21334796-21337893 (+) noncoding (-1.28091)- 99 6.05 Confident lncRNA
CNT0031256 O. sativa 3:21288286-21289233 (+) noncoding (-0.725482)- 202 0 Confident lncRNA
CNT0031255 O. sativa 3:21253616-21253847 (+) noncoding (-1.18164)- 58 0 Confident lncRNA
CNT0031254 O. sativa 3:28548955-28549258 (-) noncoding (-1.22416)1e-27 (sp|Q10E50|PLA23_ORYSJ) 71 1.943 splicing regulationConfident lncRNA
CNT0031253 O. sativa 3:22873846-22876929 (-) noncoding (-1.11285)- 68 1.571 Confident lncRNA
CNT0031252 O. sativa 3:22829290-22829506 (-) noncoding (-1.18501)- - 0 Confident lncRNA
CNT0031251 O. sativa 3:31341552-31341826 (-) noncoding (-1.04226)- - 0 Confident lncRNA
CNT0031250 O. sativa 3:24529430-24529968 (-) noncoding (-1.21147)2e-55 (sp|Q6A332|ALY3_ARATH) 44 0.408 Confident lncRNA
CNT0031249 O. sativa 3:25096446-25096807 (+) noncoding (-0.69017)- 120 0 splicing regulationConfident lncRNA
CNT0031248 O. sativa 3:25130707-25130955 (+) noncoding (-1.27574)- 50 64.869 Confident lncRNA
CNT0031247 O. sativa 3:4188560-4191203 (-) noncoding (-1.01034)2e-67 (sp|Q8H016|LOX6_ORYSJ) 64 1.066 splicing regulationConfident lncRNA
CNT0031246 O. sativa 3:16306856-16307624 (-) noncoding (-1.07552)- 49 10.936 Confident lncRNA
CNT0031245 O. sativa 3:2459610-2459843 (+) noncoding (-1.21762)- 41 21.671 Confident lncRNA
CNT0031244 O. sativa 3:2460733-2462179 (+) noncoding (-1.30318)- 64 9.605 Confident lncRNA
CNT0031243 O. sativa 3:2457687-2462191 (+) noncoding (-1.1987)- 51 14.084 splicing regulationConfident lncRNA
CNT0031242 O. sativa 3:19705812-19717599 (-) noncoding (-1.32805)- 83 10.603 Confident lncRNA
CNT0031241 O. sativa 3:35147248-35149802 (-) noncoding (-0.915788)- 107 21.667 Confident lncRNA
CNT0031240 O. sativa 3:23084475-23085336 (-) noncoding (-1.08756)- - 5.834 Confident lncRNA
CNT0031239 O. sativa 3:35147248-35149802 (-) noncoding (-0.88254)- 112 26.549 Confident lncRNA
CNT0031238 O. sativa 3:1798689-1801875 (-) coding (0.252455)- 276 7.576 splicing regulationConfident lncRNA
CNT0031237 O. sativa 3:1798689-1804365 (-) coding (1.04519)1e-29 (sp|P44439|PCNB_HAEIN) 364 7.291 splicing regulationConfident lncRNA
CNT0031236 O. sativa 3:28163601-28163949 (-) noncoding (-0.922769)- 59 4.305 Confident lncRNA
CNT0031235 O. sativa 3:36296856-36298611 (-) noncoding (-1.24623)- 73 0.178 splicing regulationConfident lncRNA
CNT0031234 O. sativa 3:33010423-33015374 (+) coding (0.680246)0 (sp|Q9LR47|IP5P3_ARATH) 543 5.249 Low-confidence lncRNA
CNT0031233 O. sativa 3:18942476-18943236 (-) noncoding (-1.27405)- 59 0 Confident lncRNA
CNT0031232 O. sativa 3:28573119-28573531 (+) noncoding (-1.18666)- 58 2.124 Confident lncRNA
CNT0031231 O. sativa 3:28559512-28560317 (+) noncoding (-1.03192)- 101 17.351 Confident lncRNA
CNT0031230 O. sativa 3:28559689-28560317 (+) noncoding (-1.11584)- 85 10.459 Confident lncRNA
CNT0031229 O. sativa 3:28566399-28567764 (+) noncoding (-1.23956)0.000005 (sp|Q9LDY5|FK172_ARATH) 61 0.287 Confident lncRNA
CNT0031228 O. sativa 3:219981-221213 (-) noncoding (-1.00985)- 45 168.881 splicing regulationConfident lncRNA
CNT0031227 O. sativa 3:7799269-7802234 (+) noncoding (-1.09744)- 148 5.071 splicing regulationConfident lncRNA
CNT0031226 O. sativa 3:7799411-7802234 (+) noncoding (-1.09048)- 150 4.525 splicing regulationConfident lncRNA
CNT0031225 O. sativa 3:7799450-7802234 (+) noncoding (-1.06949)- 148 6.687 splicing regulationConfident lncRNA
CNT0031224 O. sativa 3:34351207-34352660 (-) noncoding (-1.13512)- 92 10.383 splicing regulationConfident lncRNA
CNT0031223 O. sativa 3:1632268-1635887 (+) noncoding (-1.05031)0.00000000004 (sp|Q8LPQ8|MSSP2_ARATH) 76 0.638 Confident lncRNA
CNT0031222 O. sativa 3:31321789-31322349 (+) noncoding (-1.42342)- - 0 Confident lncRNA
CNT0031221 O. sativa 3:25341192-25341420 (-) noncoding (-1.47945)- - 2.998 Confident lncRNA
CNT0031220 O. sativa 3:31301318-31303076 (-) noncoding (-1.22338)6e-17 (sp|Q9SGA8|U83A1_ARATH) 48 2.853 Confident lncRNA
CNT0031219 O. sativa 3:34440334-34443391 (+) noncoding (-1.04078)- 101 0.774 splicing regulationConfident lncRNA
CNT0031218 O. sativa 3:3021604-3022348 (-) noncoding (-1.0363)1e-101 (sp|Q4PR48|EXP18_ORYSJ) 63 0 splicing regulationConfident lncRNA
CNT0031217 O. sativa 3:34471668-34471874 (-) noncoding (-1.44792)- - 2.853 Confident lncRNA