SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0015498 S. tuberosum 4:9684694-9684999 (+) noncoding (-1.32621)- 55 0 Confident lncRNA
CNT0015497 S. tuberosum 4:9671471-9672393 (+) noncoding (-1.09146)- 57 15.829 Confident lncRNA
CNT0015496 S. tuberosum 4:9671477-9674857 (+) noncoding (-1.31923)- 57 2.964 Confident lncRNA
CNT0015495 S. tuberosum 4:13549894-13550979 (-) coding (0.906068)1e-30 (sp|Q9M5L0|RL35_EUPES) 93 0.359 Confident lncRNA
CNT0015494 S. tuberosum 4:52261555-52278981 (+) coding (1.73718)7e-48 (sp|Q9JIB4|TF2H2_MOUSE) 183 15.857 Confident lncRNA
CNT0015493 S. tuberosum 4:52261555-52271393 (+) coding (1.74734)7e-48 (sp|Q9JIB4|TF2H2_MOUSE) 183 15.8 Confident lncRNA
CNT0015492 S. tuberosum 4:52261581-52270505 (+) coding (1.45062)8e-38 (sp|Q9JIB4|TF2H2_MOUSE) 152 18.015 Low-confidence lncRNA
CNT0015491 S. tuberosum 4:40845099-40847684 (+) noncoding (-0.927076)- 45 0 Confident lncRNA
CNT0015490 S. tuberosum 4:5050116-5050595 (-) noncoding (-0.229237)0.000000002 (sp|Q9C5I3|ERF76_ARATH) 136 0.689 Confident lncRNA
CNT0015489 S. tuberosum 4:65421482-65447212 (-) noncoding (-1.0269)- 80 9.454 Confident lncRNA
CNT0015488 S. tuberosum 4:65421482-65447212 (-) noncoding (-1.08113)- 80 7.548 Confident lncRNA
CNT0015487 S. tuberosum 4:65392791-65398720 (-) coding (0.270782)1e-25 (sp|Q3UDK1|TRAD1_MOUSE) 193 85.313 Low-confidence lncRNA
CNT0015486 S. tuberosum 4:65392791-65398812 (-) coding (0.288378)8e-26 (sp|Q3UDK1|TRAD1_MOUSE) 193 89.999 Low-confidence lncRNA
CNT0015485 S. tuberosum 4:65421482-65439347 (-) noncoding (-0.71759)- 138 7.664 Confident lncRNA
CNT0015484 S. tuberosum 4:65421482-65439347 (-) noncoding (-0.760169)- 116 6.03 Confident lncRNA
CNT0015483 S. tuberosum 4:65421482-65439448 (-) noncoding (-0.821306)- 89 10.775 Confident lncRNA
CNT0015482 S. tuberosum 4:65421482-65439448 (-) noncoding (-0.800636)- 89 8.734 Confident lncRNA
CNT0015481 S. tuberosum 4:65421482-65447211 (-) noncoding (-1.15888)- 89 14.808 Confident lncRNA
CNT0015480 S. tuberosum 4:65421482-65447212 (-) noncoding (-1.13253)- 80 12.587 Confident lncRNA
CNT0015479 S. tuberosum 4:2539287-2542122 (+) noncoding (-1.07103)2e-17 (sp|Q9LQU4|PCR2_ARATH) 94 1.513 Confident lncRNA
CNT0015478 S. tuberosum 4:57716891-57718208 (-) noncoding (-1.17301)- 50 2.556 Confident lncRNA
CNT0015477 S. tuberosum 4:57715933-57734984 (-) noncoding (-1.06643)- 149 0 Confident lncRNA
CNT0015476 S. tuberosum 4:51197622-51200740 (-) noncoding (-0.210514)- 211 3.433 Confident lncRNA
CNT0015475 S. tuberosum 4:69026564-69029834 (+) noncoding (-0.627013)1e-71 (sp|O49858|C82A3_SOYBN) 203 0 Low-confidence lncRNA
CNT0015474 S. tuberosum 4:52516703-52519735 (+) noncoding (-0.722513)0.0000000001 (sp|Q8GWV5|PUB3_ARATH) 112 0 Confident lncRNA
CNT0015473 S. tuberosum 4:52513119-52513570 (+) noncoding (-0.588316)- 57 0 Confident lncRNA
CNT0015472 S. tuberosum 4:52556267-52557068 (+) noncoding (-1.35485)- - 10.895 Confident lncRNA
CNT0015471 S. tuberosum 4:52555009-52556003 (+) noncoding (-0.994591)- 64 0 Confident lncRNA
CNT0015470 S. tuberosum 4:52580431-52591947 (+) noncoding (-0.839174)- 81 51.63 Confident lncRNA
CNT0015469 S. tuberosum 4:52580431-52581777 (+) noncoding (-0.896092)- 84 28.444 Confident lncRNA
CNT0015468 S. tuberosum 4:52591695-52591992 (+) noncoding (-1.12473)- - 1.11 Confident lncRNA
CNT0015467 S. tuberosum 4:52580439-52588279 (+) noncoding (-0.965485)- 82 19.996 Confident lncRNA
CNT0015466 S. tuberosum 4:28701676-28702254 (+) noncoding (-1.4595)- - 0 Confident lncRNA
CNT0015465 S. tuberosum 4:28499293-28502034 (+) noncoding (-0.205731)- 257 1.286 Confident lncRNA
CNT0015464 S. tuberosum 4:28502126-28502766 (+) noncoding (-0.597072)- 112 1.468 Confident lncRNA
CNT0015463 S. tuberosum 4:28143455-28148121 (+) noncoding (-0.862771)- 74 1.311 Confident lncRNA
CNT0015462 S. tuberosum 4:65424355-65439371 (+) noncoding (-1.25961)- 50 0 Confident lncRNA
CNT0015461 S. tuberosum 4:65415116-65421965 (+) noncoding (-0.944945)2e-28 (sp|Q6EP49|MAD27_ORYSJ) 93 38.244 Low-confidence lncRNA
CNT0015460 S. tuberosum 4:65379136-65379504 (+) noncoding (-1.48756)- 29 0 Confident lncRNA
CNT0015459 S. tuberosum 4:65317171-65317671 (+) noncoding (-1.21322)- 47 0 Confident lncRNA
CNT0015458 S. tuberosum 4:9587650-9589180 (-) noncoding (-1.2266)5e-43 (sp|Q9SFB5|SCP27_ARATH) 45 26.148 Confident lncRNA
CNT0015457 S. tuberosum 4:11776087-11776536 (+) noncoding (-1.10772)- 34 0.433 Confident lncRNA
CNT0015456 S. tuberosum 4:12094021-12099382 (+) noncoding (-0.406364)4e-16 (sp|F4I171|MD15A_ARATH) 165 1.323 Confident lncRNA
CNT0015455 S. tuberosum 4:35573798-35578451 (-) noncoding (-1.05577)- 82 3.402 Confident lncRNA
CNT0015454 S. tuberosum 4:35573798-35579315 (-) noncoding (-1.05358)- 82 3.545 Confident lncRNA
CNT0015453 S. tuberosum 4:35571542-35573502 (-) noncoding (-1.0308)- 45 15.964 Confident lncRNA
CNT0015452 S. tuberosum 4:35573798-35578175 (-) noncoding (-1.05192)- 82 3.651 Confident lncRNA
CNT0015451 S. tuberosum 4:9670018-9701702 (+) noncoding (-1.12975)- 47 0.192 Confident lncRNA
CNT0015450 S. tuberosum 4:64124962-64137409 (-) noncoding (-1.00391)0.000000001 (sp|Q6DJI4|RM41A_XENLA) 94 58.532 Confident lncRNA
CNT0015449 S. tuberosum 4:8220761-8235013 (+) noncoding (-0.898934)- 57 30.874 Confident lncRNA