SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0013198 S. tuberosum 9:3300550-3311301 (-) noncoding (-0.992839)0.00000008 (sp|A7RWD2|CIAO1_NEMVE) 53 33.729 Confident lncRNA
CNT0013197 S. tuberosum 9:3300550-3318010 (-) coding (2.97991)3e-69 (sp|B4KTK4|CIAO1_DROMO) 315 9.759 Low-confidence lncRNA
CNT0013196 S. tuberosum 9:3300550-3305990 (-) coding (3.3497)1e-75 (sp|B4KTK4|CIAO1_DROMO) 363 12.35 Low-confidence lncRNA
CNT0013195 S. tuberosum 9:3301631-3313771 (-) coding (0.128714)0.00000000000002 (sp|A7RWD2|CIAO1_NEMVE) 106 4.136 Confident lncRNA
CNT0013194 S. tuberosum 9:48936501-48949300 (-) noncoding (-1.032)- 57 13.003 Confident lncRNA
CNT0013193 S. tuberosum 9:48936501-48949291 (-) noncoding (-0.746545)- 242 32.431 Confident lncRNA
CNT0013192 S. tuberosum 9:48936501-48949291 (-) noncoding (-1.01321)- 83 27.255 Confident lncRNA
CNT0013191 S. tuberosum 9:48936501-48949286 (-) noncoding (-0.725583)- 158 11.078 Confident lncRNA
CNT0013190 S. tuberosum 9:48936501-48949291 (-) noncoding (-0.960894)- 100 30.484 Confident lncRNA
CNT0013189 S. tuberosum 9:18603466-18603766 (+) noncoding (-1.437)0.0000002 (sp|O22925|VSR2_ARATH) - 2.199 splicing regulationConfident lncRNA
CNT0013188 S. tuberosum 9:2808526-2815487 (+) coding (0.634355)- 299 4.05 Confident lncRNA
CNT0013187 S. tuberosum 9:2800851-2804470 (+) noncoding (-0.669484)- 105 4.52 Confident lncRNA
CNT0013186 S. tuberosum 9:12920837-12923291 (+) noncoding (-0.736557)- 76 0.367 Confident lncRNA
CNT0013185 S. tuberosum 9:12921749-12923291 (+) noncoding (-0.730726)- 76 0.374 Confident lncRNA
CNT0013184 S. tuberosum 9:59715930-59724208 (+) noncoding (-0.708831)- 181 8.98 Confident lncRNA
CNT0013183 S. tuberosum 9:39871283-39877374 (-) noncoding (-0.482339)- 152 6.374 Confident lncRNA
CNT0013182 S. tuberosum 9:52232876-52254425 (-) noncoding (-1.22681)- 63 0.297 Confident lncRNA
CNT0013181 S. tuberosum 9:27591400-27592011 (-) noncoding (-0.984859)- 42 0 Confident lncRNA
CNT0013180 S. tuberosum 9:53922484-53925780 (-) coding (1.25478)- 302 21.872 Confident lncRNA
CNT0013179 S. tuberosum 9:57428043-57430156 (+) noncoding (-0.0227571)- 191 13.212 Confident lncRNA
CNT0013178 S. tuberosum 9:55734057-55752262 (+) noncoding (-0.823697)0.00000002 (sp|P20076|IER1_SOLLC) 76 22.884 Confident lncRNA
CNT0013177 S. tuberosum 9:55734057-55735212 (+) noncoding (-0.499787)0.000000000002 (sp|P20076|IER1_SOLLC) 117 12.127 Confident lncRNA
CNT0013176 S. tuberosum 9:55654160-55758928 (+) noncoding (-0.43158)3e-64 (sp|Q00783|ICI1_SOLTU) 107 50.901 Low-confidence lncRNA
CNT0013175 S. tuberosum 9:55654132-55672477 (+) noncoding (-0.436003)1e-54 (sp|Q00783|ICI1_SOLTU) 107 40.274 Low-confidence lncRNA
CNT0013174 S. tuberosum 9:55628918-55738636 (+) noncoding (-1.18176)3e-20 (sp|P08454|ICID_SOLTU) 40 0.871 Confident lncRNA
CNT0013173 S. tuberosum 9:55628639-55758928 (+) noncoding (-0.441104)7e-64 (sp|Q00783|ICI1_SOLTU) 107 14.991 Low-confidence lncRNA
CNT0013172 S. tuberosum 9:55751619-55778721 (+) noncoding (-0.268581)0.000000000003 (sp|P20076|IER1_SOLLC) 117 13.408 Confident lncRNA
CNT0013171 S. tuberosum 9:55751619-55752262 (+) noncoding (-0.771912)0.00000001 (sp|P20076|IER1_SOLLC) 76 23.809 Confident lncRNA
CNT0013170 S. tuberosum 9:8225897-8258977 (-) noncoding (-1.19537)- 36 0 Confident lncRNA
CNT0013169 S. tuberosum 9:24436029-24437384 (-) noncoding (-0.740494)- 97 1.159 Confident lncRNA
CNT0013168 S. tuberosum 9:24435766-24437384 (-) noncoding (-0.978716)- 85 1.066 Confident lncRNA
CNT0013167 S. tuberosum 9:24715505-24716087 (-) noncoding (-0.812683)- 111 0 Confident lncRNA
CNT0013166 S. tuberosum 9:4118914-4120105 (+) noncoding (-0.594108)0.000003 (sp|Q17060|MRJP3_APIME) 115 0 Confident lncRNA
CNT0013165 S. tuberosum 9:4118917-4120105 (+) noncoding (-0.799127)- 103 0 Confident lncRNA
CNT0013164 S. tuberosum 9:56104780-56128764 (-) noncoding (-1.13597)3e-17 (sp|P93821|ACCH7_ARATH) 40 0 splicing regulationConfident lncRNA
CNT0013163 S. tuberosum 9:56102966-56128731 (-) noncoding (-1.02406)- 35 0 Confident lncRNA
CNT0013162 S. tuberosum 9:56102839-56128731 (-) noncoding (-1.06624)0.000000000001 (sp|O04847|DV4H_CATRO) 40 0 Confident lncRNA
CNT0013161 S. tuberosum 9:56102681-56128764 (-) noncoding (-1.1382)3e-17 (sp|P93821|ACCH7_ARATH) 40 0 splicing regulationConfident lncRNA
CNT0013160 S. tuberosum 9:56105051-56128780 (-) noncoding (-1.06038)- 35 0 Confident lncRNA
CNT0013159 S. tuberosum 9:60866629-60871645 (+) noncoding (-1.02857)2e-83 (sp|P10978|POLX_TOBAC) 85 0.286 Confident lncRNA
CNT0013158 S. tuberosum 9:60854160-60854428 (+) noncoding (-0.938102)- 89 7.995 Confident lncRNA
CNT0013157 S. tuberosum 9:60867135-60899911 (+) noncoding (-0.707514)1e-83 (sp|P10978|POLX_TOBAC) 88 0.182 Confident lncRNA
CNT0013156 S. tuberosum 9:60873829-60874072 (+) noncoding (-1.178)- 31 0 Confident lncRNA
CNT0013155 S. tuberosum 9:33667744-33668122 (-) noncoding (-0.681506)- 126 0 Confident lncRNA
CNT0013154 S. tuberosum 9:61317723-61324246 (-) coding (5.58924)- 730 954.123 splicing regulationConfident lncRNA
CNT0013153 S. tuberosum 9:61411649-61412149 (-) noncoding (-0.198978)0.000000000000001 (sp|P0DKG8|RSH1L_ARATH) 58 3.175 Confident lncRNA
CNT0013152 S. tuberosum 9:61381506-61382056 (-) noncoding (-1.09364)2e-17 (sp|Q9ZW74|PUX11_ARATH) 46 0 Confident lncRNA
CNT0013151 S. tuberosum 9:6790718-6791034 (+) noncoding (-1.29412)- - 1.231 Confident lncRNA
CNT0013150 S. tuberosum 9:52778781-52782592 (+) noncoding (-0.74787)0.00000000000007 (sp|P32292|ARG2_VIGRR) 98 376.829 Confident lncRNA
CNT0013149 S. tuberosum 9:55475852-55476986 (+) noncoding (-0.453089)0.000000000003 (sp|Q9FIX5|BH092_ARATH) 121 0 Confident lncRNA