SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 8594 records in
Oryza sativa

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0028116 O. sativa 5:17364090-17364964 (+) noncoding (-1.281)- 75 0 splicing regulationConfident lncRNA
CNT0028115 O. sativa 5:17365479-17366873 (+) noncoding (-1.00522)- 66 0.867 splicing regulationConfident lncRNA
CNT0028114 O. sativa 5:17367170-17368051 (+) noncoding (-0.840011)- 81 2.325 Confident lncRNA
CNT0028113 O. sativa 5:22543048-22543321 (-) noncoding (-0.900822)- 30 0 Confident lncRNA
CNT0028112 O. sativa 5:29487875-29492210 (+) noncoding (-1.21288)6e-27 (sp|Q9FM19|HIR1_ARATH) 71 2.001 splicing regulationConfident lncRNA
CNT0028111 O. sativa 5:29487875-29490249 (+) noncoding (-1.15114)2e-25 (sp|Q9FM19|HIR1_ARATH) 66 11.701 splicing regulationConfident lncRNA
CNT0028110 O. sativa 5:3986847-3987049 (-) noncoding (-1.2401)- 56 0 Confident lncRNA
CNT0028109 O. sativa 5:4030998-4031276 (-) noncoding (-1.3866)- 88 0 Confident lncRNA
CNT0028108 O. sativa 5:16360742-16361001 (-) noncoding (-1.18755)- 44 0 splicing regulationConfident lncRNA
CNT0028107 O. sativa 5:19353553-19358235 (+) noncoding (-0.582442)- 139 26.751 Confident lncRNA
CNT0028106 O. sativa 5:8529630-8533239 (+) noncoding (-0.942786)1e-33 (sp|Q9STE7|R13L3_ARATH) 113 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0028105 O. sativa 5:14902967-14903772 (+) noncoding (-1.30424)- 55 1.696 splicing regulationConfident lncRNA
CNT0028104 O. sativa 5:14901959-14902845 (+) noncoding (-1.0861)- 121 1.997 splicing regulationConfident lncRNA
CNT0028103 O. sativa 5:21433446-21434256 (-) noncoding (-1.38233)- 74 4.403 splicing regulationConfident lncRNA
CNT0028102 O. sativa 5:26130666-26132677 (-) noncoding (-1.03046)- 139 1.775 splicing regulationConfident lncRNA
CNT0028101 O. sativa 5:17490700-17491835 (+) noncoding (-1.20729)- 135 1.258 Confident lncRNA
CNT0028100 O. sativa 5:27864104-27865045 (-) noncoding (-1.17861)1e-31 (sp|Q6AT32|GT52_ORYSJ) 74 1.879 splicing regulationConfident lncRNA
CNT0028099 O. sativa 5:16649788-16650798 (-) noncoding (-0.894561)- 49 3.265 Confident lncRNA
CNT0028098 O. sativa 5:3204071-3204326 (-) noncoding (-1.20172)1e-25 (sp|Q940B8|KIN13_ARATH) - 0 Confident lncRNA
CNT0028097 O. sativa 5:3203258-3203505 (-) noncoding (-0.608144)- 82 0 Confident lncRNA
CNT0028096 O. sativa 5:13006259-13011551 (+) noncoding (-0.938486)- 148 18.215 Confident lncRNA
CNT0028095 O. sativa 5:20658462-20660906 (-) noncoding (-1.13931)2e-24 (sp|Q6L5I5|VDAC2_ORYSJ) 62 2.625 splicing regulationConfident lncRNA
CNT0028094 O. sativa 5:9327251-9327740 (-) noncoding (-1.04087)1e-44 (sp|C0LGH2|Y1561_ARATH) 88 0 splicing regulationConfident lncRNA
CNT0028093 O. sativa 5:11436321-11436650 (-) noncoding (-1.14431)- 30 18.045 Confident lncRNA
CNT0028092 O. sativa 5:26848543-26849725 (-) noncoding (-1.13681)- 101 4.287 Confident lncRNA
CNT0028091 O. sativa 5:4142086-4144095 (-) noncoding (-0.987633)2e-114 (sp|Q0DKF0|RL102_ORYSJ) 127 2.546 splicing regulationConfident lncRNA
CNT0028090 O. sativa 5:1278830-1279288 (-) noncoding (-0.898573)- 50 0 Confident lncRNA
CNT0028089 O. sativa 5:22455564-22457259 (+) noncoding (-0.709119)6e-32 (sp|P51423|RL40_BRARP) 67 0 Confident lncRNA
CNT0028088 O. sativa 5:2010127-2013352 (-) noncoding (-1.16674)0.0000002 (sp|Q39034|PER59_ARATH) 66 3.496 splicing regulationConfident lncRNA
CNT0028087 O. sativa 5:22771659-22773358 (+) noncoding (-1.27689)9e-21 (sp|P25209|NFYB_MAIZE) 71 0 splicing regulationConfident lncRNA
CNT0028086 O. sativa 5:26911181-26915125 (+) noncoding (-1.29798)- 78 4.255 splicing regulationConfident lncRNA
CNT0028085 O. sativa 5:26911181-26915125 (+) noncoding (-1.29481)- 78 3.697 splicing regulationConfident lncRNA
CNT0028084 O. sativa 5:26911181-26915125 (+) noncoding (-1.29661)- 78 4.005 splicing regulationConfident lncRNA
CNT0028083 O. sativa 5:18608281-18608535 (-) noncoding (-1.10876)- - 0 Confident lncRNA
CNT0028082 O. sativa 5:18602801-18603059 (-) noncoding (-1.31889)- - 0 Confident lncRNA
CNT0028081 O. sativa 5:23660464-23661961 (-) noncoding (-1.30041)9e-89 (sp|C0LGD7|Y1684_ARATH) 55 83.577 Confident lncRNA
CNT0028080 O. sativa 5:13772401-13781930 (-) noncoding (-0.923782)1e-60 (sp|Q8CFK2|TF3B_MOUSE) 61 0 Confident lncRNA
CNT0028079 O. sativa 5:2987591-2989846 (+) noncoding (-0.974477)1e-25 (sp|Q9FLM8|NRPBC_ARATH) 73 21.96 Confident lncRNA
CNT0028078 O. sativa 5:8020422-8021760 (-) noncoding (-1.06496)- 91 0.889 Confident lncRNA
CNT0028077 O. sativa 5:24015058-24017842 (-) coding (0.0621589)7e-48 (sp|Q9SAK5|APL_ARATH) 411 19.074 Low-confidence lncRNA
CNT0028076 O. sativa 5:360955-361574 (-) noncoding (-0.779111)- 102 0.303 Confident lncRNA
CNT0028075 O. sativa 5:5554404-5555070 (+) noncoding (-0.944917)2e-21 (sp|P27061|PPA1_SOLLC) 97 4.513 splicing regulationConfident lncRNA
CNT0028074 O. sativa 5:5516170-5554341 (+) noncoding (-1.18305)2e-19 (sp|P15490|VSPA_SOYBN) 34 0.554 Confident lncRNA
CNT0028073 O. sativa 5:868307-868632 (+) noncoding (-1.21979)- 31 3.651 splicing regulationConfident lncRNA
CNT0028072 O. sativa 5:865291-868831 (+) noncoding (-1.07914)5e-78 (sp|A7WM73|HEXO1_ARATH) 59 0.435 splicing regulationConfident lncRNA
CNT0028071 O. sativa 5:27949348-27949570 (-) noncoding (-1.04703)- 56 2.198 Confident lncRNA
CNT0028070 O. sativa 5:12250942-12255184 (-) noncoding (-0.997614)- 70 5.41 Confident lncRNA
CNT0028069 O. sativa 5:22406443-22412897 (+) noncoding (-1.05966)4e-37 (sp|Q84TF0|AKRCA_ARATH) 115 3.457 splicing regulationConfident lncRNA
CNT0028068 O. sativa 5:22406443-22412897 (+) noncoding (-1.05375)3e-37 (sp|Q84TF0|AKRCA_ARATH) 115 3.736 splicing regulationConfident lncRNA
CNT0028067 O. sativa 5:22730552-22731443 (+) noncoding (-1.16423)- 51 0 splicing regulationConfident lncRNA