SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 8594 records in
Oryza sativa

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0031966 O. sativa 1:7722086-7722677 (+) noncoding (-1.08542)- 81 55.323 Confident lncRNA
CNT0031965 O. sativa 1:32887044-32887437 (-) noncoding (-1.0204)- 74 0 Confident lncRNA
CNT0031964 O. sativa 1:41303840-41305246 (-) noncoding (-1.05775)- 82 0 Confident lncRNA
CNT0031963 O. sativa 1:41301095-41301415 (-) noncoding (-1.026)3e-17 (sp|Q5JLP4|CKX4_ORYSJ) 33 2.697 Confident lncRNA
CNT0031962 O. sativa 1:41298324-41299690 (-) noncoding (-1.16239)- 91 0.137 Confident lncRNA
CNT0031961 O. sativa 1:41242455-41243872 (-) noncoding (-1.34517)0 (sp|P35614|ERF1Z_ARATH) 48 0 Confident lncRNA
CNT0031960 O. sativa 1:34461370-34461931 (+) noncoding (-1.2442)- 34 3.649 splicing regulationConfident lncRNA
CNT0031959 O. sativa 1:35912849-35913368 (-) noncoding (-0.962365)- 93 0 Confident lncRNA
CNT0031958 O. sativa 1:42264938-42268510 (-) coding (0.0474904)6e-22 (sp|Q54LL8|U554_DICDI) 307 15.695 Low-confidence lncRNA
CNT0031957 O. sativa 1:33652142-33652868 (+) noncoding (-1.25863)- - 2.325 splicing regulationConfident lncRNA
CNT0031956 O. sativa 1:34106523-34106817 (-) noncoding (-1.47368)- 72 0 Confident lncRNA
CNT0031955 O. sativa 1:2081212-2081464 (-) noncoding (-1.17099)- 46 27.822 Confident lncRNA
CNT0031954 O. sativa 1:16232122-16233068 (-) noncoding (-1.28794)- 42 0 splicing regulationConfident lncRNA
CNT0031953 O. sativa 1:1007357-1008508 (+) noncoding (-1.12342)- 101 2.371 splicing regulationConfident lncRNA
CNT0031952 O. sativa 1:26051925-26053759 (+) noncoding (-1.18141)- 109 12.421 Confident lncRNA
CNT0031951 O. sativa 1:31638713-31638950 (-) noncoding (-1.30974)- 32 0 Confident lncRNA
CNT0031950 O. sativa 1:31629237-31629470 (-) noncoding (-1.25088)- 45 8.483 Confident lncRNA
CNT0031949 O. sativa 1:31616773-31619386 (-) coding (3.84173)0 (sp|Q5JMM1|ARFC_ORYSJ) 256 14.497 splicing regulationLow-confidence lncRNA
CNT0031948 O. sativa 1:40455789-40456679 (+) noncoding (-1.28649)- 38 1.336 Confident lncRNA
CNT0031947 O. sativa 1:34937664-34939185 (+) noncoding (-1.25013)0.00000004 (sp|P35132|UBC9_ARATH) 80 30.822 splicing regulationConfident lncRNA
CNT0031946 O. sativa 1:34937664-34939185 (+) noncoding (-1.14683)0.00000008 (sp|P35132|UBC9_ARATH) 135 101.452 splicing regulationConfident lncRNA
CNT0031945 O. sativa 1:30320730-30323965 (+) noncoding (-0.121911)7e-109 (sp|Q9LQI7|CIA30_ARATH) 262 8.331 Low-confidence lncRNA
CNT0031944 O. sativa 1:21687437-21687759 (-) noncoding (-1.17149)- 61 0 Confident lncRNA
CNT0031943 O. sativa 1:8545979-8546902 (+) noncoding (-1.2534)- 103 11.676 Confident lncRNA
CNT0031942 O. sativa 1:8500348-8501042 (+) noncoding (-1.21731)- 54 0 Confident lncRNA
CNT0031941 O. sativa 1:2575172-2575564 (-) noncoding (-1.4025)- 60 2.525 Confident lncRNA
CNT0031940 O. sativa 1:41117827-41118161 (+) noncoding (-1.0747)- 53 1.763 splicing regulationConfident lncRNA
CNT0031939 O. sativa 1:11670153-11670582 (+) noncoding (-1.05812)- 111 406.884 Confident lncRNA
CNT0031938 O. sativa 1:8786623-8792452 (+) coding (0.00462091)0.000002 (sp|Q17RH7|TPRXL_HUMAN) 430 40.127 Confident lncRNA
CNT0031937 O. sativa 1:36501575-36502727 (-) noncoding (-1.30241)- 143 1.904 Confident lncRNA
CNT0031936 O. sativa 1:37060039-37064650 (+) coding (0.0798877)0 (sp|Q3E7D0|NAT12_ARATH) 516 9.522 Low-confidence lncRNA
CNT0031935 O. sativa 1:7852782-7854147 (-) noncoding (-1.08973)- 43 0 Confident lncRNA
CNT0031934 O. sativa 1:42127731-42135754 (-) noncoding (-1.27166)- 42 0 Confident lncRNA
CNT0031933 O. sativa 1:18633195-18636853 (-) noncoding (-1.33393)- 29 2.18 Confident lncRNA
CNT0031932 O. sativa 1:42074534-42075021 (+) noncoding (-1.02318)6e-27 (sp|Q8RYK0|CML31_ORYSJ) 76 11.577 Confident lncRNA
CNT0031931 O. sativa 1:43226115-43230355 (+) noncoding (-0.800619)2e-78 (sp|O81845|PUMP1_ARATH) 153 7.5 Low-confidence lncRNA
CNT0031930 O. sativa 1:14224886-14233713 (-) coding (0.216403)4e-149 (sp|Q9LDR4|ERG24_ARATH) 322 10.827 Low-confidence lncRNA
CNT0031929 O. sativa 1:8964284-8965882 (-) noncoding (-0.994197)3e-24 (sp|Q43772|UGPA_HORVU) 54 0 splicing regulationConfident lncRNA
CNT0031928 O. sativa 1:7438862-7439430 (-) noncoding (-1.08652)- 57 8.811 Confident lncRNA
CNT0031927 O. sativa 1:3260738-3263353 (-) noncoding (-0.797159)- 51 0 Confident lncRNA
CNT0031926 O. sativa 1:32618217-32621125 (-) noncoding (-0.789877)6e-25 (sp|P40234|CKI2_SCHPO) 67 0 Confident lncRNA
CNT0031925 O. sativa 1:29384427-29385646 (-) noncoding (-1.32304)- 37 9.372 Confident lncRNA
CNT0031924 O. sativa 1:32993922-32994501 (-) noncoding (-1.24065)5e-19 (sp|O22941|PXM16_ARATH) 32 0 Confident lncRNA
CNT0031923 O. sativa 1:25777210-25782509 (-) noncoding (-0.540285)- 129 14.445 Confident lncRNA
CNT0031922 O. sativa 1:1609874-1618390 (-) noncoding (-1.13016)- 43 0 Confident lncRNA
CNT0031921 O. sativa 1:24573161-24575450 (-) noncoding (-1.218)2e-28 (sp|P82715|PPD5_ARATH) 58 0 Confident lncRNA
CNT0031920 O. sativa 1:1598725-1599270 (-) noncoding (-0.558677)- 89 1.72 Confident lncRNA
CNT0031919 O. sativa 1:42110223-42110852 (-) noncoding (-0.402892)- 72 0.778 splicing regulationConfident lncRNA
CNT0031918 O. sativa 1:33703428-33703969 (+) noncoding (-1.32096)- 108 6.588 Confident lncRNA
CNT0031917 O. sativa 1:27388844-27390887 (-) noncoding (-1.32582)- 50 2.503 Confident lncRNA