SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 9692 records in
Solanum tuberosum

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0008048 S. tuberosum 11:42297003-42299671 (-) noncoding (-1.27291)- 44 0.16 Confident lncRNA
CNT0008047 S. tuberosum 11:42297003-42299671 (-) noncoding (-1.26966)- 44 1.753 Confident lncRNA
CNT0008046 S. tuberosum 11:42297003-42299671 (-) noncoding (-1.26234)- 44 0.86 Confident lncRNA
CNT0008045 S. tuberosum 11:42318526-42322238 (-) coding (4.85813)1e-60 (sp|Q9LRR4|R13L1_ARATH) 645 0 Low-confidence lncRNA
CNT0008044 S. tuberosum 11:42318526-42328744 (-) noncoding (-0.587634)- 149 0 Confident lncRNA
CNT0008043 S. tuberosum 11:42297003-42299671 (-) noncoding (-1.27207)- 44 0.441 Confident lncRNA
CNT0008042 S. tuberosum 11:19469225-19469770 (+) noncoding (-1.15601)- 38 0 splicing regulationConfident lncRNA
CNT0008041 S. tuberosum 11:42449995-42457366 (+) coding (0.44525)0 (sp|P93101|CDC2_OXYRB) 294 12.868 Low-confidence lncRNA
CNT0008040 S. tuberosum 11:8286757-8287492 (-) noncoding (-1.30321)2e-43 (sp|Q9ATE5|FBP24_PETHY) - 1.308 Confident lncRNA
CNT0008039 S. tuberosum 11:1382912-1589635 (+) noncoding (-0.213552)2e-43 (sp|Q40392|TMVRN_NICGU) 186 6.649 splicing regulationLow-confidence lncRNA
CNT0008038 S. tuberosum 11:1402463-1496646 (+) coding (0.233078)5e-114 (sp|Q40392|TMVRN_NICGU) 376 3.944 Low-confidence lncRNA
CNT0008037 S. tuberosum 11:1402463-1404490 (+) coding (0.626829)8e-118 (sp|Q40392|TMVRN_NICGU) 403 0 Low-confidence lncRNA
CNT0008036 S. tuberosum 11:1402463-1430902 (+) coding (0.162758)5e-112 (sp|Q40392|TMVRN_NICGU) 376 3.082 Low-confidence lncRNA
CNT0008035 S. tuberosum 11:38792591-38794778 (-) noncoding (-1.04932)- 46 0.401 splicing regulationConfident lncRNA
CNT0008034 S. tuberosum 11:34634336-34634750 (-) noncoding (-0.576506)- 138 0.47 Confident lncRNA
CNT0008033 S. tuberosum 11:4531891-4534405 (+) noncoding (-1.09141)8e-19 (sp|Q54RF5|KPYK_DICDI) 100 2.233 splicing regulationConfident lncRNA
CNT0008032 S. tuberosum 11:4531891-4534405 (+) noncoding (-1.10773)1e-18 (sp|Q54RF5|KPYK_DICDI) 134 2.038 splicing regulationConfident lncRNA
CNT0008031 S. tuberosum 11:39070984-39076980 (+) coding (0.0632014)- 329 3.549 Confident lncRNA
CNT0008030 S. tuberosum 11:8571299-8576848 (-) coding (1.71272)0 (sp|Q8GX69|BGA16_ARATH) 667 0.556 Low-confidence lncRNA
CNT0008029 S. tuberosum 11:33204920-33217395 (+) noncoding (-0.317129)- 213 1.219 Confident lncRNA
CNT0008028 S. tuberosum 11:33217827-33242761 (+) noncoding (-0.352824)- 200 1.213 Confident lncRNA
CNT0008027 S. tuberosum 11:6537569-6542916 (+) noncoding (-0.882824)1e-21 (sp|Q9ZTP3|EIN4_ARATH) 84 0.472 Confident lncRNA
CNT0008026 S. tuberosum 11:6543951-6557243 (+) coding (0.134123)3e-24 (sp|Q8TCB7|METL6_HUMAN) 285 0.386 Confident lncRNA
CNT0008025 S. tuberosum 11:6557873-6562494 (+) noncoding (-1.22223)- 41 0.331 Confident lncRNA
CNT0008024 S. tuberosum 11:6559160-6563640 (+) noncoding (-1.23292)0.0000000005 (sp|Q9SJL0|U86A1_ARATH) - 0.615 splicing regulationConfident lncRNA
CNT0008023 S. tuberosum 11:35580349-35580648 (+) noncoding (-1.14988)- 55 0 Confident lncRNA
CNT0008022 S. tuberosum 11:30025525-30108199 (-) coding (0.737852)0 (sp|Q9FLG8|SPNS2_ARATH) 503 30.92 Low-confidence lncRNA
CNT0008021 S. tuberosum 11:20591516-20591881 (+) noncoding (-0.826713)- 43 0 Confident lncRNA
CNT0008020 S. tuberosum 11:42342218-42342861 (+) noncoding (-1.13975)0.000001 (sp|Q9LRR5|DRL21_ARATH) - 0 splicing regulationConfident lncRNA
CNT0008019 S. tuberosum 11:42322545-42323002 (+) noncoding (-1.0799)4e-35 (sp|Q9LRR4|R13L1_ARATH) 80 0 splicing regulationConfident lncRNA
CNT0008018 S. tuberosum 11:42320258-42342861 (+) noncoding (-1.1086)0.0000005 (sp|Q9LRR5|DRL21_ARATH) 30 0 splicing regulationConfident lncRNA
CNT0008017 S. tuberosum 11:42323574-42324008 (+) noncoding (-1.03969)0.0000000000002 (sp|Q9LRR4|R13L1_ARATH) 82 14.887 splicing regulationConfident lncRNA
CNT0008016 S. tuberosum 11:42323092-42323498 (+) noncoding (-1.17295)1e-28 (sp|Q7XA40|RGA3_SOLBU) 53 2.875 splicing regulation, miRNA-associatedConfident lncRNA
CNT0008015 S. tuberosum 11:42318543-42322396 (+) noncoding (-1.19315)2e-72 (sp|Q9LRR4|R13L1_ARATH) 196 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0008014 S. tuberosum 11:2072514-2081858 (+) coding (0.334751)6e-54 (sp|Q54HW5|GNB1L_DICDI) 380 9.805 Low-confidence lncRNA
CNT0008013 S. tuberosum 11:42297003-42299671 (-) noncoding (-1.2738)- 44 2.149 Confident lncRNA
CNT0008012 S. tuberosum 11:18685538-18709954 (-) noncoding (-1.29208)- 32 0 Confident lncRNA
CNT0008011 S. tuberosum 11:18698191-18709954 (-) noncoding (-1.1313)- 36 34.174 Confident lncRNA
CNT0008010 S. tuberosum 11:18709160-18709954 (-) noncoding (-1.19748)- 36 9.917 Confident lncRNA
CNT0008009 S. tuberosum 11:1308507-1310257 (+) noncoding (-0.825431)0.0000004 (sp|Q9YHB5|CND3_XENLA) 80 0.686 Confident lncRNA
CNT0008008 S. tuberosum 11:38249472-38420542 (-) coding (0.50169)0 (sp|F4JLI5|XDH2_ARATH) 509 7.487 Low-confidence lncRNA
CNT0008007 S. tuberosum 11:38246913-38247997 (-) coding (1.20279)1e-52 (sp|Q8GUQ8|XDH1_ARATH) 101 3.187 Confident lncRNA
CNT0008006 S. tuberosum 11:38251177-38420542 (-) noncoding (-0.992694)4e-28 (sp|F4JLI5|XDH2_ARATH) 102 3.772 Confident lncRNA
CNT0008005 S. tuberosum 11:38251177-38408823 (-) noncoding (-1.19069)0.00000000000001 (sp|F4JLI5|XDH2_ARATH) 75 3.676 Confident lncRNA
CNT0008004 S. tuberosum 11:38255609-38420542 (-) noncoding (-0.992694)4e-28 (sp|F4JLI5|XDH2_ARATH) 102 3.772 Confident lncRNA
CNT0008003 S. tuberosum 11:2724382-2727120 (-) coding (0.928937)2e-176 (sp|Q9SJZ2|PER17_ARATH) 370 30.82 Low-confidence lncRNA
CNT0008002 S. tuberosum 11:44110560-44126559 (+) noncoding (-1.21737)- 42 0 splicing regulationConfident lncRNA
CNT0008001 S. tuberosum 11:44095575-44096185 (+) noncoding (-0.903785)8e-23 (sp|Q9LQR0|LBD1_ARATH) - 0.495 Confident lncRNA
CNT0008000 S. tuberosum 11:13100076-13100722 (+) noncoding (-1.16858)- - 2.608 Confident lncRNA
CNT0007999 S. tuberosum 11:13101254-13105578 (+) noncoding (-0.652065)1e-38 (sp|Q6ZJ05|URH1_ORYSJ) 110 0.249 Low-confidence lncRNA