SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0034527 P. patens DS544951.1:472538-473111 (-) noncoding (-1.28641)- 53 0 splicing regulationConfident lncRNA
CNT0034526 P. patens DS544951.1:1478346-1480483 (+) noncoding (-1.12051)- 62 12.534 Confident lncRNA
CNT0034525 P. patens DS544951.1:1308134-1310436 (-) noncoding (-1.2475)- 68 5.284 Confident lncRNA
CNT0034524 P. patens DS544951.1:1652287-1674933 (+) coding (11.1377)- 3340 9.163 Confident lncRNA
CNT0034523 P. patens DS544951.1:1652287-1674933 (+) coding (11.3162)- 3416 9.305 Confident lncRNA
CNT0034522 P. patens DS544951.1:1652122-1674933 (+) coding (11.3162)- 3416 9.019 Confident lncRNA
CNT0034521 P. patens DS544951.1:1653123-1674933 (+) coding (11.3247)- 3426 8.654 Confident lncRNA
CNT0034520 P. patens DS544951.1:1573566-1574811 (+) noncoding (-1.00775)- 45 0.715 Confident lncRNA
CNT0034519 P. patens DS544951.1:1834970-1835197 (+) noncoding (-1.35744)- 34 0 Confident lncRNA
CNT0034518 P. patens DS544955.1:109840-110509 (+) noncoding (-0.959663)- 80 1.873 Confident lncRNA
CNT0034517 P. patens DS544955.1:1452833-1453667 (+) noncoding (-0.975932)- 57 1.382 Confident lncRNA
CNT0034516 P. patens DS544955.1:247052-249680 (+) noncoding (-1.333)- 71 2.311 Confident lncRNA
CNT0034515 P. patens DS544955.1:246955-249680 (+) noncoding (-1.33163)- 71 3.306 Confident lncRNA
CNT0034514 P. patens DS544955.1:247130-249680 (+) noncoding (-1.33852)- 71 3.079 Confident lncRNA
CNT0034513 P. patens DS544955.1:1293594-1293862 (+) noncoding (-1.10198)- 89 0 Confident lncRNA
CNT0034512 P. patens DS544955.1:169345-169551 (-) noncoding (-1.03124)- - 4.011 Confident lncRNA
CNT0034511 P. patens DS544955.1:1071562-1071772 (-) noncoding (-1.08858)- 69 0 Confident lncRNA
CNT0034510 P. patens DS544955.1:1071972-1073584 (-) noncoding (-1.05457)- 90 0.252 Confident lncRNA
CNT0034509 P. patens DS544955.1:511048-512794 (-) noncoding (-1.23591)- 48 6.559 splicing regulationConfident lncRNA
CNT0034508 P. patens DS544955.1:1502767-1503001 (-) noncoding (-0.948983)- 69 0.687 Confident lncRNA
CNT0034507 P. patens DS544955.1:908206-909042 (+) noncoding (-1.02214)- 143 1.416 Confident lncRNA
CNT0034506 P. patens DS544955.1:484099-485849 (+) noncoding (-1.30431)- 51 11.92 Confident lncRNA
CNT0034505 P. patens DS544955.1:586582-586802 (+) noncoding (-1.47618)- 61 0 Confident lncRNA
CNT0034504 P. patens DS544955.1:599927-600440 (-) noncoding (-1.18506)- 29 2.765 Confident lncRNA
CNT0034503 P. patens DS544955.1:357554-369457 (+) noncoding (-1.26187)9e-18 (sp|Q2V9B0|MY1R1_SOLTU) 97 4.386 splicing regulationConfident lncRNA
CNT0034502 P. patens DS544955.1:785716-787098 (-) noncoding (-1.28732)- 58 4.781 Confident lncRNA
CNT0034501 P. patens DS544953.1:874080-874397 (-) noncoding (-1.47052)- - 0 Confident lncRNA
CNT0034500 P. patens DS544953.1:917527-917751 (-) noncoding (-1.15513)- 36 2.414 Confident lncRNA
CNT0034499 P. patens DS544953.1:1628467-1628931 (+) noncoding (-1.1119)0.00000002 (sp|Q9FM19|HIR1_ARATH) - 4.516 splicing regulationConfident lncRNA
CNT0034498 P. patens DS544953.1:1628467-1628931 (+) noncoding (-1.40216)0.00000001 (sp|Q9FM19|HIR1_ARATH) 53 4.332 splicing regulationConfident lncRNA
CNT0034497 P. patens DS544953.1:1426884-1428096 (+) noncoding (-1.2282)- 54 10.75 Confident lncRNA
CNT0034496 P. patens DS544953.1:1675155-1678227 (+) noncoding (-0.977586)- 85 10.626 splicing regulationConfident lncRNA
CNT0034495 P. patens DS544953.1:1675248-1678227 (+) noncoding (-0.820666)- 104 6.225 splicing regulationConfident lncRNA
CNT0034494 P. patens DS544953.1:431994-433382 (-) noncoding (-1.03859)- 78 2.984 Confident lncRNA
CNT0034493 P. patens DS544953.1:603012-603857 (+) noncoding (-1.34339)- 48 5.547 splicing regulationConfident lncRNA
CNT0034492 P. patens DS544954.1:1721751-1722274 (-) noncoding (-1.36061)0.0000003 (sp|Q42134|PSA5B_ARATH) 38 0 Confident lncRNA
CNT0034491 P. patens DS544954.1:714410-714767 (+) noncoding (-1.36963)0.00000000005 (sp|Q8W1Y3|KP1_ARATH) - 0 splicing regulationConfident lncRNA
CNT0034490 P. patens DS544954.1:722209-722699 (+) noncoding (-1.209)- 70 0 splicing regulationConfident lncRNA
CNT0034489 P. patens DS544954.1:1626973-1628449 (-) noncoding (-1.03267)- 69 4.701 Confident lncRNA
CNT0034488 P. patens DS544954.1:1365382-1385433 (-) coding (14.8627)0 (sp|Q9Y4A5|TRRAP_HUMAN) 3915 8.698 Low-confidence lncRNA
CNT0034487 P. patens DS544954.1:1365382-1385433 (-) coding (14.7034)0 (sp|Q9Y4A5|TRRAP_HUMAN) 3896 8.739 Low-confidence lncRNA
CNT0034486 P. patens DS544954.1:1365382-1385433 (-) coding (14.592)0 (sp|Q9Y4A5|TRRAP_HUMAN) 3865 8.807 Low-confidence lncRNA
CNT0034485 P. patens DS544954.1:1504342-1505408 (+) noncoding (-0.995509)- 75 1.526 splicing regulationConfident lncRNA
CNT0034484 P. patens DS544954.1:1505769-1506261 (+) noncoding (-1.16569)- 63 2.605 Confident lncRNA
CNT0034483 P. patens DS544954.1:287754-290915 (-) noncoding (-0.828652)- 124 9.857 Confident lncRNA
CNT0034482 P. patens DS544954.1:794487-795128 (-) noncoding (-1.35182)- 41 0 Confident lncRNA
CNT0034481 P. patens DS544954.1:787025-787389 (-) noncoding (-1.0382)- 121 1.558 splicing regulationConfident lncRNA
CNT0034480 P. patens DS544954.1:287754-290915 (-) noncoding (-0.823994)- 124 9.966 Confident lncRNA
CNT0034479 P. patens DS544954.1:1187338-1188953 (-) noncoding (-1.17056)7e-18 (sp|Q8VHK9|DHX36_MOUSE) 52 3.618 splicing regulationConfident lncRNA
CNT0034478 P. patens DS544954.1:1497570-1499184 (-) noncoding (-1.04104)- 88 8.144 Confident lncRNA