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Found 2569 records in
Amborella trichopoda

CPC status:   #
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Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0023172 A. trichopoda AmTr_v1.0_scaffold00033:3959296-3963935 (-) coding (0.373983)2e-88 (sp|Q6ETL2|TLP4_ORYSJ) 369 10.047 Low-confidence lncRNA
CNT0023171 A. trichopoda AmTr_v1.0_scaffold00033:4502448-4502746 (+) noncoding (-1.02464)- 41 0 Confident lncRNA
CNT0023170 A. trichopoda AmTr_v1.0_scaffold00033:3695944-3696509 (-) coding (0.145464)3e-18 (sp|F4JN00|CSTR4_ARATH) 83 0 Confident lncRNA
CNT0023169 A. trichopoda AmTr_v1.0_scaffold00033:4588912-4615794 (-) coding (1.48364)- 486 13.193 Confident lncRNA
CNT0023168 A. trichopoda AmTr_v1.0_scaffold00033:4624494-4636103 (-) noncoding (-0.821857)- 123 10.886 Confident lncRNA
CNT0023167 A. trichopoda AmTr_v1.0_scaffold00033:1886459-1887007 (+) noncoding (-0.153818)4e-16 (sp|Q680P8|RS29_ARATH) 44 14.326 Confident lncRNA
CNT0023166 A. trichopoda AmTr_v1.0_scaffold00033:1961659-1974028 (+) noncoding (-0.737017)1e-28 (sp|Q9T070|COX6A_ARATH) 108 74.107 Low-confidence lncRNA
CNT0023165 A. trichopoda AmTr_v1.0_scaffold00033:2742496-2748882 (+) noncoding (-0.365268)- 152 8.557 Confident lncRNA
CNT0023164 A. trichopoda AmTr_v1.0_scaffold00033:4268671-4272484 (+) coding (0.354696)2e-31 (sp|Q680P8|RS29_ARATH) 56 55.479 Low-confidence lncRNA
CNT0023163 A. trichopoda AmTr_v1.0_scaffold00033:4100512-4119044 (+) coding (18.6087)0 (sp|Q8GY23|UPL1_ARATH) 3677 41.289 Low-confidence lncRNA
CNT0023162 A. trichopoda AmTr_v1.0_scaffold00033:2012053-2013944 (+) noncoding (-1.05884)- 77 1.701 Confident lncRNA
CNT0023161 A. trichopoda AmTr_v1.0_scaffold00033:1097601-1117254 (-) noncoding (-0.634652)6e-22 (sp|A1WWH9|PHS_HALHL) 194 10.996 Low-confidence lncRNA
CNT0023160 A. trichopoda AmTr_v1.0_scaffold00033:1097601-1117254 (-) noncoding (-0.692071)5e-22 (sp|A1WWH9|PHS_HALHL) 136 9.4 Low-confidence lncRNA
CNT0023159 A. trichopoda AmTr_v1.0_scaffold00033:5472689-5478558 (+) noncoding (-0.603517)1e-109 (sp|Q8VZB2|HACD_ARATH) 222 27.394 Low-confidence lncRNA
CNT0023158 A. trichopoda AmTr_v1.0_scaffold00033:3288986-3319933 (-) coding (1.24104)0 (sp|Q3E9A0|ANTR6_ARATH) 561 17.14 Low-confidence lncRNA
CNT0023157 A. trichopoda AmTr_v1.0_scaffold00033:2192608-2193814 (+) coding (0.487677)- 213 44.453 splicing regulationConfident lncRNA
CNT0023156 A. trichopoda AmTr_v1.0_scaffold00033:2192608-2193814 (+) coding (0.607029)- 226 42.727 splicing regulationConfident lncRNA
CNT0023155 A. trichopoda AmTr_v1.0_scaffold00033:5146960-5149714 (-) noncoding (-0.276984)- 175 9.174 Confident lncRNA
CNT0023154 A. trichopoda AmTr_v1.0_scaffold00033:5140686-5149714 (-) noncoding (-0.217112)- 170 11.22 Confident lncRNA
CNT0023153 A. trichopoda AmTr_v1.0_scaffold00033:3016084-3064369 (-) coding (1.41927)8e-18 (sp|Q8BID8|FXL14_MOUSE) 578 54.018 Confident lncRNA
CNT0023152 A. trichopoda AmTr_v1.0_scaffold00033:3016084-3064369 (-) coding (1.09778)6e-18 (sp|Q8BID8|FXL14_MOUSE) 524 53.319 Confident lncRNA
CNT0023151 A. trichopoda AmTr_v1.0_scaffold00033:3016084-3064369 (-) coding (1.4345)7e-18 (sp|Q8BID8|FXL14_MOUSE) 578 56.295 Confident lncRNA
CNT0023150 A. trichopoda AmTr_v1.0_scaffold00031:388904-390412 (+) noncoding (-1.05208)- 62 5.272 Confident lncRNA
CNT0023149 A. trichopoda AmTr_v1.0_scaffold00031:3199211-3200071 (-) noncoding (-1.094)- 75 5.733 Confident lncRNA
CNT0023148 A. trichopoda AmTr_v1.0_scaffold00031:1604504-1606183 (+) noncoding (-0.575096)0.000000000004 (sp|Q9ZQH1|CML48_ARATH) 59 13.152 Confident lncRNA
CNT0023147 A. trichopoda AmTr_v1.0_scaffold00031:1632658-1643435 (+) noncoding (-0.701114)3e-53 (sp|Q7XSQ7|TRL33_ORYSJ) 138 5.732 Low-confidence lncRNA
CNT0023146 A. trichopoda AmTr_v1.0_scaffold00031:4274565-4275028 (-) noncoding (-0.934454)- 154 2.401 Confident lncRNA
CNT0023145 A. trichopoda AmTr_v1.0_scaffold00031:5136551-5139961 (-) noncoding (-1.09308)- 57 2.514 Confident lncRNA
CNT0023144 A. trichopoda AmTr_v1.0_scaffold00031:5372125-5374299 (-) noncoding (-1.12978)- 71 7.276 Confident lncRNA
CNT0023143 A. trichopoda AmTr_v1.0_scaffold00031:5419751-5420295 (-) noncoding (-1.03512)- 89 6.133 Confident lncRNA
CNT0023142 A. trichopoda AmTr_v1.0_scaffold00031:5368235-5370393 (+) noncoding (-0.504648)- 185 2.973 Confident lncRNA
CNT0023141 A. trichopoda AmTr_v1.0_scaffold00031:203826-214544 (-) coding (0.120937)1e-127 (sp|A7RWD2|CIAO1_NEMVE) 359 15.741 Low-confidence lncRNA
CNT0023140 A. trichopoda AmTr_v1.0_scaffold00034:5340959-5354056 (+) noncoding (-0.000580863)1e-35 (sp|Q658I5|LMBD1_ORYSJ) 172 1.879 Low-confidence lncRNA
CNT0023139 A. trichopoda AmTr_v1.0_scaffold00034:1163314-1164978 (-) noncoding (-0.900351)- 52 3.148 Confident lncRNA
CNT0023138 A. trichopoda AmTr_v1.0_scaffold00034:384672-397987 (+) noncoding (-0.403329)1e-35 (sp|Q9M5L0|RL35_EUPES) 116 25.296 Confident lncRNA
CNT0023137 A. trichopoda AmTr_v1.0_scaffold00034:384672-397987 (+) noncoding (-0.637212)4e-36 (sp|Q9M5L0|RL35_EUPES) 32 26.572 Confident lncRNA
CNT0023136 A. trichopoda AmTr_v1.0_scaffold00034:384672-397987 (+) noncoding (-0.519244)1e-36 (sp|Q9M5L0|RL35_EUPES) 105 26.929 Low-confidence lncRNA
CNT0023135 A. trichopoda AmTr_v1.0_scaffold00034:810667-811671 (+) noncoding (-0.835803)- 68 2.678 Confident lncRNA
CNT0023134 A. trichopoda AmTr_v1.0_scaffold00034:860958-862519 (+) noncoding (-1.36372)- 50 9.059 Confident lncRNA
CNT0023133 A. trichopoda AmTr_v1.0_scaffold00034:860958-864455 (+) noncoding (-1.13958)- 89 11.193 Confident lncRNA
CNT0023132 A. trichopoda AmTr_v1.0_scaffold00034:1674756-1682751 (+) noncoding (-1.29773)0.00000009 (sp|Q5D869|NRPE1_ARATH) 60 7.215 Confident lncRNA
CNT0023131 A. trichopoda AmTr_v1.0_scaffold00034:3540857-3579037 (-) coding (0.112874)2e-122 (sp|Q8VYR2|NUDT9_ARATH) 299 10.017 Low-confidence lncRNA
CNT0023130 A. trichopoda AmTr_v1.0_scaffold00034:2472172-2477891 (+) noncoding (-1.05085)- 68 5.13 Confident lncRNA
CNT0023129 A. trichopoda AmTr_v1.0_scaffold00034:5001414-5006612 (+) noncoding (-1.21481)- 68 6.481 Confident lncRNA
CNT0023128 A. trichopoda AmTr_v1.0_scaffold00036:5210468-5229710 (-) noncoding (-0.443371)- 146 127.103 Confident lncRNA
CNT0023127 A. trichopoda AmTr_v1.0_scaffold00036:2383841-2410005 (+) noncoding (-1.37355)0.000000000000007 (sp|A7YVD7|NDUF6_BOVIN) 48 0 Confident lncRNA
CNT0023126 A. trichopoda AmTr_v1.0_scaffold00036:2189335-2281851 (-) coding (0.435836)3e-140 (sp|Q8RWH8|NIPA9_ARATH) 344 6.065 Low-confidence lncRNA
CNT0023125 A. trichopoda AmTr_v1.0_scaffold00036:2349926-2359885 (-) noncoding (-0.157477)- 75 8.147 Confident lncRNA
CNT0023124 A. trichopoda AmTr_v1.0_scaffold00036:2382663-2416917 (-) noncoding (-0.823115)2e-37 (sp|A2AIL4|NDUF6_MOUSE) 207 14.213 Low-confidence lncRNA
CNT0023123 A. trichopoda AmTr_v1.0_scaffold00036:1590417-1596460 (+) coding (0.433062)7e-20 (sp|Q06450|ATP5E_IPOBA) 51 10.761 Confident lncRNA