SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 4506 records in
Vitis vinifera

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0006506 V. vinifera 18:6271571-6276729 (-) noncoding (-1.14538)- 55 1.346 Confident lncRNA
CNT0006505 V. vinifera 18:1835233-1837681 (-) noncoding (-1.1206)1e-18 (sp|Q94AQ9|SGRL_ARATH) 68 1.231 Confident lncRNA
CNT0006504 V. vinifera 18:11590927-11593339 (+) noncoding (-1.13008)- 102 1.308 Confident lncRNA
CNT0006503 V. vinifera 18:4706295-4710069 (+) noncoding (-1.18683)0.00000008 (sp|Q9M9E8|FB92_ARATH) 41 2.55 splicing regulationConfident lncRNA
CNT0006502 V. vinifera 18:7523271-7524854 (+) noncoding (-1.23595)- 52 0.749 Confident lncRNA
CNT0006501 V. vinifera 18:7523331-7524854 (+) noncoding (-1.29828)- 52 0 Confident lncRNA
CNT0006500 V. vinifera 18:7570369-7571134 (-) noncoding (-0.940287)- 111 0.221 Confident lncRNA
CNT0006499 V. vinifera 18:7570369-7571134 (-) noncoding (-0.900495)- 98 0.277 Confident lncRNA
CNT0006498 V. vinifera 18:7588108-7588436 (-) noncoding (-0.19971)0.0000000000002 (sp|Q9FJX3|VDAC2_ARATH) 81 0 Confident lncRNA
CNT0006497 V. vinifera 18:10139320-10143218 (-) noncoding (-0.862952)0.000001 (sp|Q9FZE0|BGL40_ARATH) 45 1.807 Confident lncRNA
CNT0006496 V. vinifera 18:13236219-13237151 (-) noncoding (-1.07413)- 40 0 Confident lncRNA
CNT0006495 V. vinifera 18:26551667-26552991 (-) noncoding (-1.27665)- 95 0.372 splicing regulationConfident lncRNA
CNT0006494 V. vinifera 18:26465439-26466625 (-) noncoding (-0.998436)2e-62 (sp|Q40392|TMVRN_NICGU) 99 0.057 splicing regulationConfident lncRNA
CNT0006493 V. vinifera 18:26462937-26463591 (-) noncoding (-1.05351)3e-42 (sp|Q40392|TMVRN_NICGU) 60 0 splicing regulation, miRNA-associatedConfident lncRNA
CNT0006492 V. vinifera 18:1166394-1167063 (+) noncoding (-0.955278)0.000000000006 (sp|Q6NPN9|DWA2_ARATH) 79 4.027 splicing regulationConfident lncRNA
CNT0006491 V. vinifera 18:26433462-26505889 (-) noncoding (-0.522397)- 82 0.231 splicing regulationConfident lncRNA
CNT0006490 V. vinifera 18:26433462-26575945 (-) noncoding (-0.708782)- 60 1.155 splicing regulationConfident lncRNA
CNT0006489 V. vinifera 18:714695-715792 (+) noncoding (-1.06978)- 72 1.265 splicing regulationConfident lncRNA
CNT0006488 V. vinifera 18:714866-715792 (+) noncoding (-1.17472)- 96 1.144 splicing regulationConfident lncRNA
CNT0006487 V. vinifera 18:10522082-10525187 (+) noncoding (-1.0604)- 59 0.109 splicing regulationConfident lncRNA
CNT0006486 V. vinifera 18:93949-94150 (-) noncoding (-1.22275)- 31 0.549 splicing regulationConfident lncRNA
CNT0006485 V. vinifera 18:118635-130189 (-) noncoding (-1.32847)- 124 0.447 Confident lncRNA
CNT0006484 V. vinifera 18:6235012-6258579 (-) coding (21.4044)0 (sp|Q8H0T4|UPL2_ARATH) 3691 100.753 Low-confidence lncRNA
CNT0006483 V. vinifera 18:24649733-24651639 (+) noncoding (-1.08331)- 39 1.981 Confident lncRNA
CNT0006482 V. vinifera 18:8520690-8523012 (-) noncoding (-1.08123)3e-17 (sp|P42731|PABP2_ARATH) 75 5.825 splicing regulationConfident lncRNA
CNT0006481 V. vinifera 18:593667-596121 (-) noncoding (-0.989387)- 45 143.996 Confident lncRNA
CNT0006480 V. vinifera 18:569299-570173 (-) noncoding (-1.09162)- 101 1.14 Confident lncRNA
CNT0006479 V. vinifera 18:28362275-28423554 (-) noncoding (-0.744451)- 83 0.941 Confident lncRNA
CNT0006478 V. vinifera 18:19482988-19483792 (+) noncoding (-1.14054)0.000000000007 (sp|Q6ICX4|PTBP3_ARATH) 38 0 splicing regulationConfident lncRNA
CNT0006477 V. vinifera 18:19488110-19491528 (+) noncoding (-0.959802)- 57 0.074 splicing regulationConfident lncRNA
CNT0006476 V. vinifera 18:29246432-29246986 (-) noncoding (-1.03194)- 42 1.624 Confident lncRNA
CNT0006475 V. vinifera 18:3204914-3205221 (-) noncoding (-1.02006)- 67 0.765 Confident lncRNA
CNT0006474 V. vinifera 18:28362275-28426722 (-) noncoding (-0.764128)- 84 0.93 Confident lncRNA
CNT0006473 V. vinifera 18:17740508-17741002 (+) noncoding (-1.29562)- 35 0.624 splicing regulationConfident lncRNA
CNT0006472 V. vinifera 18:25543731-25544417 (-) noncoding (-1.12377)- 44 0.927 Confident lncRNA
CNT0006471 V. vinifera 18:28305735-28417026 (-) noncoding (-1.11885)1e-18 (sp|P25861|G3PC_ANTMA) 31 3.066 Confident lncRNA
CNT0006470 V. vinifera 18:28305735-28414751 (-) noncoding (-0.996676)0.000000000000001 (sp|P92979|APR1_ARATH) - 0 Confident lncRNA
CNT0006469 V. vinifera 18:28305735-28417334 (-) noncoding (-1.13285)2e-18 (sp|P25861|G3PC_ANTMA) 39 2.993 Confident lncRNA
CNT0006468 V. vinifera 18:24362746-24363199 (+) noncoding (-1.36434)- 43 0.695 Confident lncRNA
CNT0006467 V. vinifera 18:1478454-1478780 (+) noncoding (-1.16375)- 55 0.414 splicing regulationConfident lncRNA
CNT0006466 V. vinifera 18:6287774-6288165 (+) noncoding (-1.41257)0.0000002 (sp|A5ABH4|RGLB_ASPNC) 42 0.446 splicing regulationConfident lncRNA
CNT0006465 V. vinifera 18:9504326-9509750 (+) noncoding (-0.838347)- 64 2.489 Confident lncRNA
CNT0006464 V. vinifera 18:19023681-19025482 (-) noncoding (-1.11037)8e-40 (sp|Q9M9H6|CK1_ARATH) 92 11.916 splicing regulationConfident lncRNA
CNT0006463 V. vinifera 18:11357782-11358471 (+) noncoding (-1.24298)2e-40 (sp|Q9SDZ9|PPAF2_IPOBA) 61 1.27 splicing regulationConfident lncRNA
CNT0006462 V. vinifera 18:11353559-11353820 (+) noncoding (-1.03746)- 86 0.304 Confident lncRNA
CNT0006461 V. vinifera 18:11354071-11354453 (+) noncoding (-1.19325)- 34 0 Confident lncRNA
CNT0006460 V. vinifera 18:11353458-11360158 (+) noncoding (-1.27278)0.0000002 (sp|Q38924|PPA12_ARATH) 36 8.808 Confident lncRNA
CNT0006459 V. vinifera 18:23074180-23077709 (+) noncoding (-1.18571)8e-46 (sp|Q40392|TMVRN_NICGU) 56 1.267 splicing regulationConfident lncRNA
CNT0006458 V. vinifera 18:18677215-18679248 (+) noncoding (-1.33188)2e-33 (sp|Q9SQI2|GIGAN_ARATH) 51 2.503 splicing regulationConfident lncRNA
CNT0006457 V. vinifera 18:20891330-20892797 (+) noncoding (-1.07034)- - 0 Confident lncRNA