SEARCH OPTIONS

lncRNA id
CPC status
Max. peptide length
Max. expression
Potential function
Results confidence
Order results by

Current search details:

Found 2569 records in
Amborella trichopoda

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
Results confidence:   Show all
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0022122 A. trichopoda AmTr_v1.0_scaffold00101:416405-423330 (-) noncoding (-1.162)- 76 4.576 Confident lncRNA
CNT0022121 A. trichopoda AmTr_v1.0_scaffold00101:528902-530021 (+) noncoding (-0.808636)- 120 4.269 Confident lncRNA
CNT0022120 A. trichopoda AmTr_v1.0_scaffold00101:217221-227418 (-) noncoding (-0.367409)4e-83 (sp|Q8GUK6|PIS2_ARATH) 226 27.862 Low-confidence lncRNA
CNT0022119 A. trichopoda AmTr_v1.0_scaffold00101:1284438-1291896 (-) coding (1.01647)2e-39 (sp|O22860|RL38_ARATH) 69 77.33 Low-confidence lncRNA
CNT0022118 A. trichopoda AmTr_v1.0_scaffold00101:1105156-1107300 (-) noncoding (-0.538362)- 79 5.868 Confident lncRNA
CNT0022117 A. trichopoda AmTr_v1.0_scaffold00101:1761581-1769527 (-) coding (0.162152)- 277 7.447 Confident lncRNA
CNT0022116 A. trichopoda AmTr_v1.0_scaffold00101:2281573-2286636 (+) noncoding (-0.0326428)- 175 13.923 Confident lncRNA
CNT0022115 A. trichopoda AmTr_v1.0_scaffold00101:1665817-1666699 (+) noncoding (-0.642411)- 138 46.899 Confident lncRNA
CNT0022114 A. trichopoda AmTr_v1.0_scaffold00103:147266-154004 (+) noncoding (-0.511517)- 186 40.012 Confident lncRNA
CNT0022113 A. trichopoda AmTr_v1.0_scaffold00103:1943044-1958012 (+) noncoding (-0.373141)2e-39 (sp|Q9Y3E0|GOT1B_HUMAN) 140 6.718 Low-confidence lncRNA
CNT0022112 A. trichopoda AmTr_v1.0_scaffold00103:898915-939215 (-) coding (2.05347)0 (sp|P92943|CLCD_ARATH) 798 24.126 Low-confidence lncRNA
CNT0022111 A. trichopoda AmTr_v1.0_scaffold00103:898915-939215 (-) coding (1.97797)0 (sp|P92943|CLCD_ARATH) 775 24.334 Low-confidence lncRNA
CNT0022110 A. trichopoda AmTr_v1.0_scaffold00103:331673-332784 (-) noncoding (-1.20511)- 72 0 Confident lncRNA
CNT0022109 A. trichopoda AmTr_v1.0_scaffold00104:1382714-1388230 (+) noncoding (-0.0314971)0.0000000002 (sp|Q9ZQW8|U2AFA_ORYSJ) 37 19.929 Confident lncRNA
CNT0022108 A. trichopoda AmTr_v1.0_scaffold00104:1382714-1388230 (+) noncoding (-0.0177574)0.00000000000002 (sp|Q9ZQW8|U2AFA_ORYSJ) 45 9.264 Confident lncRNA
CNT0022107 A. trichopoda AmTr_v1.0_scaffold00104:1271390-1273907 (-) coding (0.266679)- 297 39.363 Confident lncRNA
CNT0022106 A. trichopoda AmTr_v1.0_scaffold00104:1266414-1273907 (-) coding (0.27181)- 294 32.65 Confident lncRNA
CNT0022105 A. trichopoda AmTr_v1.0_scaffold00104:999174-1062312 (+) noncoding (-0.419241)5e-49 (sp|F4IRQ5|THG1_ARATH) 147 6.054 Low-confidence lncRNA
CNT0022104 A. trichopoda AmTr_v1.0_scaffold00104:995871-1014621 (+) coding (0.934457)6e-18 (sp|Q54GN2|KTHY_DICDI) 100 6.792 Low-confidence lncRNA
CNT0022103 A. trichopoda AmTr_v1.0_scaffold00104:994190-1062312 (+) noncoding (-0.0307215)2e-53 (sp|F4ISV6|THG2_ARATH) 147 7.501 Low-confidence lncRNA
CNT0022102 A. trichopoda AmTr_v1.0_scaffold00105:85276-87650 (+) noncoding (-1.06897)- 31 3.981 Confident lncRNA
CNT0022101 A. trichopoda AmTr_v1.0_scaffold00105:70775-71189 (+) noncoding (-1.31438)- 36 4.922 Confident lncRNA
CNT0022100 A. trichopoda AmTr_v1.0_scaffold00105:1249878-1253357 (-) noncoding (-1.15423)0.0000003 (sp|O81057|ASK14_ARATH) 37 48.153 Confident lncRNA
CNT0022099 A. trichopoda AmTr_v1.0_scaffold00105:735215-736048 (+) noncoding (-0.982063)4e-24 (sp|Q9LJD8|M3KE1_ARATH) 58 5.662 Confident lncRNA
CNT0022098 A. trichopoda AmTr_v1.0_scaffold00105:709248-715530 (-) noncoding (-0.992282)- 87 5.68 Confident lncRNA
CNT0022097 A. trichopoda AmTr_v1.0_scaffold00110:2256166-2261851 (-) coding (1.16816)0 (sp|Q3EC77|PMT5_ARATH) 642 7.473 Low-confidence lncRNA
CNT0022096 A. trichopoda AmTr_v1.0_scaffold00110:2262407-2262845 (-) noncoding (-0.790572)- 88 4.23 Confident lncRNA
CNT0022095 A. trichopoda AmTr_v1.0_scaffold00110:1868999-1883944 (-) coding (1.82432)0 (sp|Q8RX28|HDA5_ARATH) 683 20.494 Low-confidence lncRNA
CNT0022094 A. trichopoda AmTr_v1.0_scaffold00110:770140-771537 (+) noncoding (-0.849541)2e-36 (sp|Q39017|DGK1_ARATH) 91 4.662 Confident lncRNA
CNT0022093 A. trichopoda AmTr_v1.0_scaffold00110:383767-389907 (-) coding (0.826567)0 (sp|Q9FF10|HPSE1_ARATH) 524 32.455 Low-confidence lncRNA
CNT0022092 A. trichopoda AmTr_v1.0_scaffold00110:28501-110412 (-) noncoding (-1.18941)- 64 5.911 Confident lncRNA
CNT0022091 A. trichopoda AmTr_v1.0_scaffold00110:1383061-1385547 (-) noncoding (-1.11323)- 67 5.036 Confident lncRNA
CNT0022090 A. trichopoda AmTr_v1.0_scaffold00110:1293599-1297443 (-) coding (1.55506)2e-36 (sp|Q339X2|BGL34_ORYSJ) 99 19.238 Confident lncRNA
CNT0022089 A. trichopoda AmTr_v1.0_scaffold00110:571420-576797 (-) noncoding (-0.842993)- 118 2.89 Confident lncRNA
CNT0022088 A. trichopoda AmTr_v1.0_scaffold00110:27788-29071 (+) noncoding (-0.858653)- 109 6831.36 Confident lncRNA
CNT0022087 A. trichopoda AmTr_v1.0_scaffold00110:272554-282814 (+) noncoding (-1.06656)3e-139 (sp|Q9FLZ8|EDL2_ARATH) 247 78.033 Low-confidence lncRNA
CNT0022086 A. trichopoda AmTr_v1.0_scaffold00110:1737731-1740577 (-) noncoding (-1.11688)- 71 3.526 Confident lncRNA
CNT0022085 A. trichopoda AmTr_v1.0_scaffold00106:250327-251467 (-) noncoding (-0.761337)9e-18 (sp|Q8GYA4|CRK10_ARATH) 120 12.091 Confident lncRNA
CNT0022084 A. trichopoda AmTr_v1.0_scaffold00106:2259979-2260512 (-) noncoding (-1.29208)- - 245.518 Confident lncRNA
CNT0022083 A. trichopoda AmTr_v1.0_scaffold00106:1156100-1167068 (+) noncoding (-1.24078)- 83 2.552 Confident lncRNA
CNT0022082 A. trichopoda AmTr_v1.0_scaffold00106:1105066-1116461 (+) coding (0.469374)4e-19 (sp|Q9ZVI7|GAUT7_ARATH) 98 9.437 Confident lncRNA
CNT0022081 A. trichopoda AmTr_v1.0_scaffold00106:1949469-1960665 (-) noncoding (-0.997946)- 112 18.206 Confident lncRNA
CNT0022080 A. trichopoda AmTr_v1.0_scaffold00106:1149435-1150901 (-) noncoding (-0.963338)- 57 7.853 Confident lncRNA
CNT0022079 A. trichopoda AmTr_v1.0_scaffold00106:8098-14669 (-) coding (0.726352)7e-39 (sp|Q96HL8|SH3Y1_HUMAN) 473 39.421 Low-confidence lncRNA
CNT0022078 A. trichopoda AmTr_v1.0_scaffold00106:1384929-1388624 (-) noncoding (-0.0657325)- 322 10.029 Confident lncRNA
CNT0022077 A. trichopoda AmTr_v1.0_scaffold00106:2294848-2297282 (+) noncoding (-1.18663)- 78 58.032 Confident lncRNA
CNT0022076 A. trichopoda AmTr_v1.0_scaffold00106:2294848-2297282 (+) noncoding (-1.15312)- 77 38.255 Confident lncRNA
CNT0022075 A. trichopoda AmTr_v1.0_scaffold00106:1953870-1960665 (-) noncoding (-1.03018)- 104 14.969 Confident lncRNA
CNT0022074 A. trichopoda AmTr_v1.0_scaffold00106:2087304-2093426 (-) noncoding (-0.111367)3e-35 (sp|Q8GXL3|SPL8_ARATH) 278 5.912 Low-confidence lncRNA
CNT0022073 A. trichopoda AmTr_v1.0_scaffold00106:2002569-2008805 (+) noncoding (-0.0216406)2e-84 (sp|O81304|PAP11_ARATH) 226 7.536 Low-confidence lncRNA