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lncRNA id
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Found 4761 records in
Arabidopsis thaliana

CPC status:   #
Max. peptide length:   #
Max. expression:   #
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Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0042425 A. thaliana 3:1848848-1849332 (+) noncoding (-1.27702)- 37 72.62 Confident lncRNA
CNT0042424 A. thaliana 3:1848876-1849332 (+) noncoding (-1.23009)- 68 46.803 Confident lncRNA
CNT0042423 A. thaliana 3:1848883-1850596 (+) noncoding (-1.2585)- 58 34.244 Confident lncRNA
CNT0042422 A. thaliana 3:8733645-8733893 (+) noncoding (-1.15462)0.00000000001 (sp|O04955|GSHRC_BRARP) 34 24.289 splicing regulationConfident lncRNA
CNT0042421 A. thaliana 3:8734012-8734232 (+) noncoding (-1.1324)0.00000000000002 (sp|P48641|GSHRC_ARATH) 50 7.819 splicing regulationConfident lncRNA
CNT0042420 A. thaliana 3:9122183-9122702 (-) noncoding (-1.06273)- 44 18.421 splicing regulationConfident lncRNA
CNT0042419 A. thaliana 3:20880551-20880766 (-) noncoding (-1.06129)- 44 0 splicing regulationConfident lncRNA
CNT0042418 A. thaliana 3:5883774-5884487 (+) noncoding (-1.25076)- 33 4.039 Confident lncRNA
CNT0042417 A. thaliana 3:20874308-20874656 (-) noncoding (-1.34784)- 61 0 Confident lncRNA
CNT0042416 A. thaliana 3:12350379-12350887 (-) noncoding (-0.799832)- 67 0.898 Confident lncRNA
CNT0042415 A. thaliana 3:12359738-12360033 (-) noncoding (-1.27184)0.000000002 (sp|Q8LPN7|RNG1L_ARATH) 71 0 Confident lncRNA
CNT0042414 A. thaliana 3:5883718-5884487 (+) noncoding (-1.15972)1e-18 (sp|Q9LUV1|PMEI2_ARATH) 61 3.981 Confident lncRNA
CNT0042413 A. thaliana 3:3400008-3400633 (-) noncoding (-1.40033)- 35 3.504 splicing regulationConfident lncRNA
CNT0042412 A. thaliana 3:13590192-13592042 (+) noncoding (-1.28849)- 34 7.301 Confident lncRNA
CNT0042411 A. thaliana 3:13589122-13589670 (+) noncoding (-1.22314)- - 0.971 Confident lncRNA
CNT0042410 A. thaliana 3:13592105-13592585 (+) noncoding (-1.21023)- - 0 Confident lncRNA
CNT0042409 A. thaliana 3:14171525-14172161 (-) noncoding (-0.8943)- 54 0 Confident lncRNA
CNT0042408 A. thaliana 3:22728384-22729206 (+) noncoding (-1.04099)8e-43 (sp|Q9M322|TFB1C_ARATH) 51 0.644 splicing regulationConfident lncRNA
CNT0042407 A. thaliana 3:5142395-5142837 (-) noncoding (-0.890327)- 32 8.512 Confident lncRNA
CNT0042406 A. thaliana 3:1289667-1290362 (+) noncoding (-1.08045)4e-17 (sp|O24407|IAA16_ARATH) 71 6.923 splicing regulationConfident lncRNA
CNT0042405 A. thaliana 3:19625620-19626148 (-) noncoding (-1.13654)- 52 3.076 splicing regulationConfident lncRNA
CNT0042404 A. thaliana 3:12485527-12487452 (-) noncoding (-0.940198)- 73 0.338 Confident lncRNA
CNT0042403 A. thaliana 3:15060571-15061578 (+) noncoding (-1.00163)- 98 0 Confident lncRNA
CNT0042402 A. thaliana 3:7801744-7802408 (-) noncoding (-1.2431)6e-24 (sp|P0C2F6|RNHX1_ARATH) 47 0.087 splicing regulationConfident lncRNA
CNT0042401 A. thaliana 3:5066209-5066830 (+) noncoding (-0.937841)- 48 7.064 splicing regulationConfident lncRNA
CNT0042400 A. thaliana 3:19660460-19661522 (+) noncoding (-1.03961)1e-51 (sp|P38666|RL242_ARATH) 59 2.191 splicing regulationConfident lncRNA
CNT0042399 A. thaliana 3:19661745-19662163 (+) noncoding (-1.12038)- 34 38.241 splicing regulationConfident lncRNA
CNT0042398 A. thaliana 3:5953576-5953963 (+) noncoding (-1.05045)0.00000000002 (sp|Q9LUT2|METK4_ARATH) 63 41.794 splicing regulationConfident lncRNA
CNT0042397 A. thaliana 3:4337486-4337703 (+) noncoding (-0.966818)0.0000000001 (sp|Q9LTT3|HMG10_ARATH) 72 0 splicing regulationConfident lncRNA
CNT0042396 A. thaliana 3:7861995-7862568 (+) noncoding (-1.25413)3e-25 (sp|Q33245|RBL_ULMAL) 48 0 Confident lncRNA
CNT0042395 A. thaliana 3:7852903-7853476 (+) noncoding (-1.25413)3e-25 (sp|Q33245|RBL_ULMAL) 48 0 Confident lncRNA
CNT0042394 A. thaliana 3:7842295-7842545 (+) noncoding (-1.21664)- 37 79.036 splicing regulationConfident lncRNA
CNT0042393 A. thaliana 3:11097479-11098400 (+) noncoding (-1.23261)- 40 2.678 Confident lncRNA
CNT0042392 A. thaliana 3:3725270-3725476 (+) noncoding (-1.49864)- - 16.695 splicing regulationConfident lncRNA
CNT0042391 A. thaliana 3:10158314-10159194 (-) noncoding (-0.9815)3e-27 (sp|Q9M337|RS211_ARATH) 98 0.255 Confident lncRNA
CNT0042390 A. thaliana 3:21265542-21265868 (-) noncoding (-1.24511)0.00000001 (sp|O22941|PXM16_ARATH) 52 12.173 Confident lncRNA
CNT0042389 A. thaliana 3:19940572-19941038 (-) noncoding (-1.43621)- 41 0 splicing regulationConfident lncRNA
CNT0042388 A. thaliana 3:6958505-6958826 (-) noncoding (-1.10845)- - 30.857 splicing regulationConfident lncRNA
CNT0042387 A. thaliana 3:5814545-5816646 (-) noncoding (-0.286036)- 31 0.07 splicing regulationConfident lncRNA
CNT0042386 A. thaliana 3:5814545-5816597 (-) noncoding (-0.408633)- 95 0.028 splicing regulationConfident lncRNA
CNT0042385 A. thaliana 3:17575970-17579577 (-) noncoding (-0.790429)0.000000000002 (sp|Q8LES0|CSTR5_ARATH) 85 43.972 Confident lncRNA
CNT0042384 A. thaliana 3:23211368-23212021 (-) noncoding (-1.19321)2e-25 (sp|Q9LZJ1|BGL07_ARATH) - 26.422 splicing regulationConfident lncRNA
CNT0042383 A. thaliana 3:15984670-15989088 (-) noncoding (-1.40077)3e-63 (sp|P32961|NRL1_ARATH) 68 11.701 splicing regulationConfident lncRNA
CNT0042382 A. thaliana 3:15984670-15989135 (-) noncoding (-1.40036)9e-59 (sp|P32961|NRL1_ARATH) 38 7.97 splicing regulationConfident lncRNA
CNT0042381 A. thaliana 3:20828430-20828902 (-) noncoding (-1.03244)- 31 3.255 splicing regulationConfident lncRNA
CNT0042380 A. thaliana 3:1753340-1756797 (+) noncoding (-1.02185)7e-56 (sp|Q9M9L0|APC11_ARATH) 90 49.495 splicing regulationLow-confidence lncRNA
CNT0042379 A. thaliana 3:1758365-1758570 (+) noncoding (-1.02154)0.00000000002 (sp|Q9ZNS6|RCI2B_ARATH) 47 31.05 Confident lncRNA
CNT0042378 A. thaliana 3:17941252-17942133 (-) noncoding (-0.960773)7e-89 (sp|Q9STM4|C3H43_ARATH) 65 0 splicing regulationConfident lncRNA
CNT0042377 A. thaliana 3:3480973-3481513 (-) noncoding (-0.934726)- - 26.977 splicing regulation, miRNA-associatedConfident lncRNA
CNT0042376 A. thaliana 3:11351105-11351578 (-) noncoding (-0.788357)- 55 0 Confident lncRNA