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Found 2711 records in
Physcomitrella patens

CPC status:   #
Max. peptide length:   #
Max. expression:   #
Potential function:   #
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Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CPC status (score) Swiss-Prot best hit Max. peptide length Max. expression Potential function Confidence
CNT0035177 P. patens DS544905.1:2662342-2663661 (+) noncoding (-1.22223)- 81 21.532 Confident lncRNA
CNT0035176 P. patens DS544906.1:2447447-2481156 (+) coding (15.4047)3e-22 (sp|Q07878|VPS13_YEAST) 4649 1.114 Low-confidence lncRNA
CNT0035175 P. patens DS544906.1:2447447-2481156 (+) coding (12.9329)3e-22 (sp|Q07878|VPS13_YEAST) 3098 1.084 Low-confidence lncRNA
CNT0035174 P. patens DS544906.1:2447447-2481156 (+) coding (15.6113)5e-47 (sp|Q54LB8|VP13A_DICDI) 4641 1.043 Low-confidence lncRNA
CNT0035173 P. patens DS544906.1:2447447-2481156 (+) coding (15.7935)2e-41 (sp|Q54LB8|VP13A_DICDI) 4691 1.032 Low-confidence lncRNA
CNT0035172 P. patens DS544906.1:400920-401227 (+) noncoding (-1.02712)- 67 0 Confident lncRNA
CNT0035171 P. patens DS544906.1:2447447-2481156 (+) coding (15.1922)3e-22 (sp|Q07878|VPS13_YEAST) 3810 1.023 Confident lncRNA
CNT0035170 P. patens DS544906.1:2447447-2481156 (+) coding (14.6569)2e-41 (sp|Q54LB8|VP13A_DICDI) 3062 1.01 Low-confidence lncRNA
CNT0035169 P. patens DS544906.1:2447447-2481156 (+) coding (15.62)3e-22 (sp|Q07878|VPS13_YEAST) 4751 1.009 Low-confidence lncRNA
CNT0035168 P. patens DS544906.1:2447447-2481156 (+) coding (14.6804)2e-41 (sp|Q54LB8|VP13A_DICDI) 3060 1.01 Low-confidence lncRNA
CNT0035167 P. patens DS544906.1:2447447-2481156 (+) coding (15.2565)3e-22 (sp|Q07878|VPS13_YEAST) 2847 0.969 Low-confidence lncRNA
CNT0035166 P. patens DS544906.1:2447447-2481156 (+) coding (14.7477)3e-22 (sp|Q07878|VPS13_YEAST) 2847 0.927 Low-confidence lncRNA
CNT0035165 P. patens DS544906.1:136792-138162 (-) noncoding (-1.11113)- 47 2.108 Confident lncRNA
CNT0035164 P. patens DS544906.1:1362968-1364752 (-) noncoding (-1.04947)6e-45 (sp|Q03363|DNJH1_ALLPO) 105 10.05 Confident lncRNA
CNT0035163 P. patens DS544906.1:1326184-1327891 (-) noncoding (-1.21395)4e-18 (sp|P04146|COPIA_DROME) 53 7.826 Confident lncRNA
CNT0035162 P. patens DS544906.1:1799456-1800061 (-) noncoding (-1.30941)- 53 0.245 splicing regulationConfident lncRNA
CNT0035161 P. patens DS544906.1:690928-692403 (-) noncoding (-0.976967)- 51 5.144 Confident lncRNA
CNT0035160 P. patens DS544906.1:2398280-2399526 (+) noncoding (-0.783126)0.000000003 (sp|Q65XK0|ILV5_ORYSJ) 55 2.313 Confident lncRNA
CNT0035159 P. patens DS544906.1:335372-339482 (-) coding (0.263264)2e-52 (sp|C0LGQ5|GSO1_ARATH) 861 1.195 splicing regulationLow-confidence lncRNA
CNT0035158 P. patens DS544906.1:1769871-1774746 (-) noncoding (-1.20294)- 68 14.808 Confident lncRNA
CNT0035157 P. patens DS544906.1:229415-230166 (-) noncoding (-1.26829)- 56 1.461 Confident lncRNA
CNT0035156 P. patens DS544906.1:1362968-1363818 (+) noncoding (-1.08592)2e-16 (sp|P42824|DNJH2_ALLPO) 51 1.355 splicing regulationConfident lncRNA
CNT0035155 P. patens DS544906.1:1362968-1363818 (+) noncoding (-1.22724)5e-32 (sp|P42824|DNJH2_ALLPO) 51 0 splicing regulationConfident lncRNA
CNT0035154 P. patens DS544906.1:343080-344162 (-) noncoding (-1.39002)- 63 13.542 Confident lncRNA
CNT0035153 P. patens DS544906.1:705780-707041 (-) noncoding (-1.23326)- 96 9.027 Confident lncRNA
CNT0035152 P. patens DS544906.1:474279-474720 (+) noncoding (-1.17192)- 43 21.5 Confident lncRNA
CNT0035151 P. patens DS544909.1:1267523-1271204 (+) noncoding (-1.30011)- 68 5.361 Confident lncRNA
CNT0035150 P. patens DS544909.1:127770-128869 (-) noncoding (-1.07866)- 57 15.946 Confident lncRNA
CNT0035149 P. patens DS544909.1:159539-160413 (-) noncoding (-1.23644)- 55 0.594 Confident lncRNA
CNT0035148 P. patens DS544909.1:1791590-1794637 (-) noncoding (-1.31548)1e-18 (sp|Q8K0U4|HS12A_MOUSE) 70 0.991 Confident lncRNA
CNT0035147 P. patens DS544909.1:33872-36147 (+) noncoding (-1.182)6e-49 (sp|P10978|POLX_TOBAC) 81 2.909 Confident lncRNA
CNT0035146 P. patens DS544909.1:34005-36147 (+) noncoding (-1.11975)5e-47 (sp|P10978|POLX_TOBAC) 73 2.019 Confident lncRNA
CNT0035145 P. patens DS544909.1:32317-33175 (+) noncoding (-1.19938)- 36 5.406 Confident lncRNA
CNT0035144 P. patens DS544909.1:390701-392821 (-) noncoding (-1.25416)0.00000000000001 (sp|Q9ARD5|LT02_HORVU) 54 182.764 Confident lncRNA
CNT0035143 P. patens DS544909.1:390701-392821 (-) noncoding (-1.25322)0.00000000000001 (sp|Q9ARD5|LT02_HORVU) 54 185.537 Confident lncRNA
CNT0035142 P. patens DS544909.1:2568179-2568508 (+) noncoding (-1.14661)- 41 0 Confident lncRNA
CNT0035141 P. patens DS544909.1:2398961-2400238 (-) noncoding (-1.04831)- 93 3.185 Confident lncRNA
CNT0035140 P. patens DS544909.1:390701-392821 (-) noncoding (-1.22375)0.000000000000003 (sp|Q9ARD5|LT02_HORVU) 54 153.14 Confident lncRNA
CNT0035139 P. patens DS544909.1:1152713-1154595 (+) noncoding (-0.93477)0.0000000000002 (sp|Q9SZC9|HMA6_ARATH) 83 4.35 Confident lncRNA
CNT0035138 P. patens DS544909.1:390701-392821 (-) noncoding (-1.2526)0.00000000000001 (sp|Q9ARD5|LT02_HORVU) 54 187.536 Confident lncRNA
CNT0035137 P. patens DS544909.1:612408-615688 (+) noncoding (-1.37787)- 83 36.618 Confident lncRNA
CNT0035136 P. patens DS544909.1:888593-889574 (-) noncoding (-1.2659)- 49 2.279 Confident lncRNA
CNT0035135 P. patens DS544909.1:863509-864212 (-) noncoding (-1.20294)- 60 5.756 Confident lncRNA
CNT0035134 P. patens DS544909.1:747069-747665 (-) noncoding (-0.881779)4e-23 (sp|Q9SD61|C3H42_ARATH) 67 13.644 Low-confidence lncRNA
CNT0035133 P. patens DS544909.1:763247-764440 (+) noncoding (-0.934332)- 71 3.218 splicing regulationConfident lncRNA
CNT0035132 P. patens DS544907.1:2717450-2718497 (-) noncoding (-1.12469)- 69 3.777 Confident lncRNA
CNT0035131 P. patens DS544907.1:2717450-2718498 (-) noncoding (-1.13178)- 69 2.096 Confident lncRNA
CNT0035130 P. patens DS544907.1:70494-71451 (+) noncoding (-1.34133)- 49 22.901 Confident lncRNA
CNT0035129 P. patens DS544907.1:248338-250282 (-) noncoding (-1.12414)- 108 63.156 splicing regulationConfident lncRNA
CNT0035128 P. patens DS544907.1:2041417-2042331 (+) noncoding (-1.23527)- 43 0.311 Confident lncRNA