Common name: Tausch goatgrass
Latin name: Aegilops tauschii
Genome assembly: GCA_000347335.1
All retrocopies: 62
Parental genes: 52

Summary: Number of retrocopies :
Conserved ORF: 56 ORF 6 ORF

# RetrogeneDB ID Identity Coverage ORF conservation
1. retro_atau_1 93.10 % 100.00 % ORF
2. retro_atau_2 69.83 % 86.23 % ORF
3. retro_atau_3 68.26 % 78.40 % ORF
4. retro_atau_4 65.91 % 55.24 % ORF
5. retro_atau_5 54.59 % 91.41 % ORF
6. retro_atau_6 89.64 % 64.71 % ORF
7. retro_atau_7 54.23 % 97.74 % ORF
8. retro_atau_8 58.96 % 66.93 % ORF
9. retro_atau_9 70.25 % 62.70 % ORF
10. retro_atau_10 71.33 % 50.18 % ORF
11. retro_atau_11 78.20 % 83.46 % ORF
12. retro_atau_12 50.26 % 64.66 % ORF
13. retro_atau_13 67.76 % 91.70 % ORF
14. retro_atau_14 75.18 % 75.00 % ORF
15. retro_atau_15 74.86 % 98.62 % ORF
16. retro_atau_16 78.51 % 54.14 % ORF
17. retro_atau_17 55.72 % 91.14 % ORF
18. retro_atau_18 69.49 % 81.16 % ORF
19. retro_atau_19 81.23 % 61.32 % ORF
20. retro_atau_20 71.21 % 70.41 % ORF
21. retro_atau_21 67.31 % 82.28 % ORF
22. retro_atau_22 68.86 % 95.10 % ORF
23. retro_atau_23 63.05 % 92.67 % ORF
24. retro_atau_24 58.62 % 96.63 % ORF
25. retro_atau_25 91.67 % 50.76 % ORF
26. retro_atau_26 94.12 % 90.67 % ORF
27. retro_atau_28 94.99 % 87.37 % ORF
28. retro_atau_30 94.85 % 90.67 % ORF
29. retro_atau_32 83.23 % 51.60 % ORF
30. retro_atau_33 74.87 % 82.16 % ORF
31. retro_atau_34 52.17 % 60.13 % ORF
32. retro_atau_35 65.72 % 75.27 % ORF
33. retro_atau_37 54.90 % 55.46 % ORF
34. retro_atau_38 68.45 % 98.99 % ORF
35. retro_atau_39 54.91 % 66.37 % ORF
36. retro_atau_40 53.06 % 59.35 % ORF
37. retro_atau_41 90.41 % 97.33 % ORF
38. retro_atau_42 93.50 % 82.00 % ORF
39. retro_atau_43 51.69 % 68.75 % ORF
40. retro_atau_44 55.12 % 62.95 % ORF
41. retro_atau_45 69.26 % 79.22 % ORF
42. retro_atau_46 93.09 % 100.00 % ORF
43. retro_atau_47 68.14 % 64.98 % ORF
44. retro_atau_48 91.67 % 75.00 % ORF
45. retro_atau_49 95.59 % 90.67 % ORF
46. retro_atau_52 51.28 % 92.86 % ORF
47. retro_atau_53 96.48 % 94.67 % ORF
48. retro_atau_54 52.27 % 55.35 % ORF
49. retro_atau_56 83.18 % 74.83 % ORF
50. retro_atau_57 53.52 % 85.51 % ORF
51. retro_atau_58 93.38 % 90.67 % ORF
52. retro_atau_60 80.99 % 100.00 % ORF
53. retro_atau_61 58.93 % 58.97 % ORF
54. retro_atau_62 66.14 % 52.21 % ORF
55. retro_atau_64 63.33 % 57.69 % ORF
56. retro_atau_65 97.18 % 94.67 % ORF
57. retro_atau_66 94.85 % 90.67 % ORF
58. retro_atau_67 92.65 % 90.67 % ORF
59. retro_atau_68 84.25 % 97.33 % ORF
60. retro_atau_70 60.32 % 73.26 % ORF
61. retro_atau_71 75.57 % 60.40 % ORF
62. retro_atau_72 58.87 % 96.86 % ORF
# Ensembl ID Symbol Description
1. F775_32107 Histone H3.3 [Source:UniProtKB/TrEMBL;Acc:N1QT34]
2. F775_28539 Chaperone protein clpB 2 [Source:UniProtKB/TrEMBL;Acc:M8C0B3]
3. F775_17053
4. F775_29675 Transcription initiation factor IIB [Source:UniProtKB/TrEMBL;Acc:M8CP89]
5. F775_32457 Ubiquitin carrier protein E2 36 [Source:UniProtKB/TrEMBL;Acc:M8B2S0]
6. F775_30198
7. F775_06457 Transcription initiation factor IIE subunit beta [Source:UniProtKB/TrEMBL;Acc:N1R5P3]
8. F775_11948 Alternative oxidase 1c, mitochondrial [Source:UniProtKB/TrEMBL;Acc:M8BTK1]
9. F775_01983
10. F775_15320
11. F775_14312
12. F775_28795 triosephosphate isomerase [Source:Projected from Arabidopsis thaliana (AT2G21170) TAIR;Acc:AT2G21170]
13. F775_28326
14. F775_07363
15. F775_28085
16. F775_31129 CYP23-B Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:C0J030]
17. F775_32445 Putative LRR receptor-like serine/threonine-protein kinase [Source:UniProtKB/TrEMBL;Acc:N1QZW3]
18. F775_32747 DNA gyrase subunit B, chloroplastic/mitochondrial [Source:UniProtKB/TrEMBL;Acc:M8BHU1]
19. F775_27787 Protein-tyrosine phosphatase mitochondrial 1-like protein [Source:UniProtKB/TrEMBL;Acc:M8ATY9]
20. F775_31142 Putative 1-aminocyclopropane-1-carboxylate deaminase [Source:UniProtKB/TrEMBL;Acc:M8CCQ4]
21. F775_19450 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Source:UniProtKB/TrEMBL;Acc:M8CE21]
22. F775_23448 Fruit protein [Source:UniProtKB/TrEMBL;Acc:M8BC19]
23. F775_26048 Histidyl-tRNA synthetase [Source:UniProtKB/TrEMBL;Acc:N1QT69]
24. F775_26510
25. F775_06068
26. F775_43871
27. F775_30029 Mov34/MPN/PAD-1 family protein [Source:Projected from Arabidopsis thaliana (AT5G23540) TAIR;Acc:AT5G23540]
28. F775_27037 Sirohydrochlorin ferrochelatase [Source:UniProtKB/TrEMBL;Acc:N1QWP2]
29. F775_28952 26S protease regulatory subunit 6B-like protein [Source:UniProtKB/TrEMBL;Acc:N1QU25]
30. F775_31516 70 kDa peptidyl-prolyl isomerase [Source:UniProtKB/TrEMBL;Acc:M8BLG4]
31. F775_25997
32. F775_17082
33. F775_25618 Disease resistance protein RGA2 [Source:UniProtKB/TrEMBL;Acc:M8BUF0]
34. F775_28657 Xaa-Pro dipeptidase [Source:UniProtKB/TrEMBL;Acc:M8CV29]
35. F775_28569 Ribose-phosphate pyrophosphokinase 2 [Source:UniProtKB/TrEMBL;Acc:M8CJ73]
36. F775_21190
37. F775_32196 Aquaporin PIP2-1 [Source:UniProtKB/TrEMBL;Acc:M8CEA3]
38. F775_32946 ATP synthase subunit beta, mitochondrial [Source:UniProtKB/TrEMBL;Acc:M8B2K7]
39. F775_27431
40. F775_08453 Protein SRG1 [Source:UniProtKB/TrEMBL;Acc:M8AMY0]
41. F775_03869 Peptidyl-prolyl cis-trans isomerase-like protein 4 [Source:UniProtKB/TrEMBL;Acc:M8BGT6]
42. F775_09413 1-aminocyclopropane-1-carboxylate oxidase [Source:UniProtKB/TrEMBL;Acc:M8C6N9]
43. F775_12909 K(+)/H(+) antiporter 13 [Source:UniProtKB/TrEMBL;Acc:M8C8B5]
44. F775_26813 40S ribosomal protein S27 [Source:UniProtKB/TrEMBL;Acc:M8B8P1]
45. F775_14124
46. F775_32715 40S ribosomal protein S13-1 [Source:UniProtKB/TrEMBL;Acc:M8AWZ5]
47. F775_06160 COBRA-like protein 6 [Source:UniProtKB/TrEMBL;Acc:M8AX69]
48. F775_06769 GTP binding Elongation factor Tu family protein [Source:Projected from Arabidopsis thaliana (AT4G02930) TAIR;Acc:AT4G02930]
49. F775_05185
50. F775_08492
51. F775_32412 Fructose-bisphosphate aldolase, chloroplastic [Source:UniProtKB/TrEMBL;Acc:M8BHV4]
52. F775_08238 Protein pelota [Source:UniProtKB/TrEMBL;Acc:N1QRN6]
Retrogenes FASTA BED
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Parental genes FASTA BED
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