Parental gene:

NTAN1, ENSACAG00000003857

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343580.1:79304..99724(+)


>ENSACAG00000003857
ATGCCTTTGCTGGTGGACGGGCAGCGGGTGGAGCCCTCGCAGCGGCCCCGGGCCTTGGCCTTCGCTCACCGGGGGCTGGA
GGAGCAAGCCAGGCGTCTCCGAAGCCAACCCGCTCGCCTGGTGGGCCCCAAAGGGCTCCTCTACGTCCAGCAGAGAGAGT
TTGCAGCCACCACTCCTCGGGATGGTTCTGTTTCCATCCTTGGATCCGATGATGCAACTACCTGCCACATAGTAGTAATC
AGGCACACAGGTAGTGGAGCGACGTGCCTGACGCATTGCGATGGGTCAGATACAGAAATGGAAGTCCTGTTAATGATGAA
TGCAATCAAAATGCTTTCTTCTAACACAGAATGTGGAAGGTTGGAGGTACACCTGGTTGGAGGGTTCAATGACGATAGGC
ATTTATCCCAGCAACTTACCAACCAGCTTCTTAAGGCTTTTAAGCAGAGGCTGGATGCAATAAACTTAATAATAATAATA
ATAATAACAGATTTAAATGACCGGCAGGAAAAAGGCAACCACTTTCCGTTTTTATATGGAATTGCTGTAAACGTTAAAAC
TGGAGAAGTCTTCCACGCCACATTTCCAGACAGAGGACCTGCTGAGGATTTGCGTTCCGCCAGTATATTGACAGGAGCCA
AGATGGTTAACATTTATGACTCGAGGAAGGAAGAGCTTCGCATTGGGCCTTATTTCTGGATGCCTTTCCCCCATGTCGAT
TTCTGGCTACAACAGGACGACGAGCACATATTGCAGAATCTTTCCACTTCGCCGCTCGCCGAACCCCCTCATTTCGTTTC
CCACATCCGGGCCACTCTCGTGTACTTAAAAGAGCATCCTTTTCCCGACAAGACCCTCTTCCCTAACAGGAGACCCTGGA
TCTACAGGAAGAACAGCGATGGCCTATGGGAGAGGGTCTCTGCGGATCAGATCTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 11 .42 RPM
SRP009831_brain 14 .39 RPM
SRP009831_dewlap 32 .82 RPM
SRP009831_embryo 33 .58 RPM
SRP009831_heart 20 .18 RPM
SRP009831_liver 14 .44 RPM
SRP009831_lung 22 .21 RPM
SRP009831_ovary 33 .74 RPM
SRP009831_skeletal_muscle 14 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000011818 ortholog_one2one 3 retrogenes
retro_chof_1148, retro_chof_1591, retro_chof_2046,
Dasypus novemcinctus ENSDNOG00000016017 ortholog_one2one 5 retrogenes
retro_dnov_1068, retro_dnov_1159, retro_dnov_129, retro_dnov_874, retro_dnov_97,
Echinops telfairi ENSETEG00000014054 ortholog_one2one 1 retrogene
retro_etel_1914,
Microcebus murinus ENSMICG00000014995 ortholog_one2one 2 retrogenes
retro_mmur_1479, retro_mmur_959,
Myotis lucifugus ENSMLUG00000003455 ortholog_one2one 1 retrogene
retro_mluc_1398,
Mustela putorius furo ENSMPUG00000014327 ortholog_one2one 1 retrogene
retro_mputfur_762,
Otolemur garnettii ENSOGAG00000002538 ortholog_one2many 2 retrogenes
retro_ogar_706, retro_ogar_78,
Pteropus vampyrus ENSPVAG00000002982 ortholog_one2one 1 retrogene
retro_pvam_626,
Tupaia belangeri ENSTBEG00000014096 ortholog_one2one 2 retrogenes
retro_tbel_3921, retro_tbel_905,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_62 81.25 61.74
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSACAG00000003857 retrocopies