Parental gene:

PMM2, ENSBTAG00000001440

Aliases:None
Description:Phosphomannomutase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q3SZJ9]
Organism:Cow (Bos taurus)
Coordinates:25:7700703..7730822(+)


>ENSBTAG00000001440
ATGGCTGCGCCCGGTCCAGCGCTCTGCCTTTTCGACGTGGACGGGACCCTGACGGCCCCGCGGCAGAAAATTACCAAAGA
CATGGATTGCTTTCTGCAAAAACTGAGGCAGAAGATCAAAATTGGTGTCGTCGGCGGGTCGGACTTTGAGAAAGTACAGG
AGCAGCTGGGAGATGACGTTATTAAAAAATATGATTACGTGTTTCCAGAAAATGGCTTGGTAGCATACAGAGATGGGAAA
CTCTTGTGTAAACAGAATATTCAAGGTCACCTGGGTGAAGCCCTAATCCAGGATTTAATCAACTACTGTCTGAGCTACAT
CGCGAAAATCAAGCTCCCGAAGAAGAGGGGCACTTTCATAGAGTTCCGTAACGGGATGCTGAACGTGTCGCCGATCGGAA
GAAGCTGCAGCCAGGAAGAACGCATTGAGTTCTACGAGCTGGATCAGAAAGAAAACATAAGACAAAAGTTCGTGGAGGAT
CTGCGAAAAGAGTTTGCTGGGAAAGGCCTCACGTTTTCCATAGGAGGCCAGATCAGCTTCGATGTCTTCCCCGATGGCTG
GGACAAGAGGTACTGCCTGGGACACGTGGAGAAGGACGGCTATAAGACCATCTATTTCTTCGGCGACAAAACCATGCCAG
GCGGGAATGACCACGAGATCTTCACAGACCCCAGGACAGTGGGCTACACAGTGGCGGCGCCGGAGGACACGCGCAGGATC
TGCGAGGAGCTCTTCTGCTGA

Library Parental gene expression (RPM)
ERP005899_liver 14 .13 RPM
ERP005899_muscle 53 .58 RPM
SRP017611_brain 8 .13 RPM
SRP017611_kidney 25 .96 RPM
SRP017611_liver 32 .70 RPM
SRP030211_testis 18 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Monodelphis domestica ENSMODG00000005737 ortholog_one2many 1 retrogene
retro_mdom_285,
Otolemur garnettii ENSOGAG00000016560 possible_ortholog 1 retrogene
retro_ogar_1095,
Sus scrofa ENSSSCG00000021236 possible_ortholog 1 retrogene
retro_sscr_329,
Tursiops truncatus ENSTTRG00000014827 ortholog_one2one 2 retrogenes
retro_ttru_1894, retro_ttru_977,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_307 59.68 73.98
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2. retro_btau_1188 98.66 91.06
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Download FASTA sequences of all ENSBTAG00000001440 retrocopies