Parental gene: | PMM2, ENSBTAG00000001440 |
| Aliases: | None |
| Description: | Phosphomannomutase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q3SZJ9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 25:7700703..7730822(+) |
>ENSBTAG00000001440
ATGGCTGCGCCCGGTCCAGCGCTCTGCCTTTTCGACGTGGACGGGACCCTGACGGCCCCGCGGCAGAAAATTACCAAAGA
CATGGATTGCTTTCTGCAAAAACTGAGGCAGAAGATCAAAATTGGTGTCGTCGGCGGGTCGGACTTTGAGAAAGTACAGG
AGCAGCTGGGAGATGACGTTATTAAAAAATATGATTACGTGTTTCCAGAAAATGGCTTGGTAGCATACAGAGATGGGAAA
CTCTTGTGTAAACAGAATATTCAAGGTCACCTGGGTGAAGCCCTAATCCAGGATTTAATCAACTACTGTCTGAGCTACAT
CGCGAAAATCAAGCTCCCGAAGAAGAGGGGCACTTTCATAGAGTTCCGTAACGGGATGCTGAACGTGTCGCCGATCGGAA
GAAGCTGCAGCCAGGAAGAACGCATTGAGTTCTACGAGCTGGATCAGAAAGAAAACATAAGACAAAAGTTCGTGGAGGAT
CTGCGAAAAGAGTTTGCTGGGAAAGGCCTCACGTTTTCCATAGGAGGCCAGATCAGCTTCGATGTCTTCCCCGATGGCTG
GGACAAGAGGTACTGCCTGGGACACGTGGAGAAGGACGGCTATAAGACCATCTATTTCTTCGGCGACAAAACCATGCCAG
GCGGGAATGACCACGAGATCTTCACAGACCCCAGGACAGTGGGCTACACAGTGGCGGCGCCGGAGGACACGCGCAGGATC
TGCGAGGAGCTCTTCTGCTGA
ATGGCTGCGCCCGGTCCAGCGCTCTGCCTTTTCGACGTGGACGGGACCCTGACGGCCCCGCGGCAGAAAATTACCAAAGA
CATGGATTGCTTTCTGCAAAAACTGAGGCAGAAGATCAAAATTGGTGTCGTCGGCGGGTCGGACTTTGAGAAAGTACAGG
AGCAGCTGGGAGATGACGTTATTAAAAAATATGATTACGTGTTTCCAGAAAATGGCTTGGTAGCATACAGAGATGGGAAA
CTCTTGTGTAAACAGAATATTCAAGGTCACCTGGGTGAAGCCCTAATCCAGGATTTAATCAACTACTGTCTGAGCTACAT
CGCGAAAATCAAGCTCCCGAAGAAGAGGGGCACTTTCATAGAGTTCCGTAACGGGATGCTGAACGTGTCGCCGATCGGAA
GAAGCTGCAGCCAGGAAGAACGCATTGAGTTCTACGAGCTGGATCAGAAAGAAAACATAAGACAAAAGTTCGTGGAGGAT
CTGCGAAAAGAGTTTGCTGGGAAAGGCCTCACGTTTTCCATAGGAGGCCAGATCAGCTTCGATGTCTTCCCCGATGGCTG
GGACAAGAGGTACTGCCTGGGACACGTGGAGAAGGACGGCTATAAGACCATCTATTTCTTCGGCGACAAAACCATGCCAG
GCGGGAATGACCACGAGATCTTCACAGACCCCAGGACAGTGGGCTACACAGTGGCGGCGCCGGAGGACACGCGCAGGATC
TGCGAGGAGCTCTTCTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 8 .13 RPM |
| SRP017611_kidney | 25 .96 RPM |
| SRP017611_liver | 32 .70 RPM |
| ERP005899_muscle | 53 .58 RPM |
| ERP005899_liver | 14 .13 RPM |
| SRP030211_testis | 18 .99 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Monodelphis domestica | ENSMODG00000005737 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000016560 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000021236 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000014827 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_307 | 59.68 | 73.98 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1188 | 98.66 | 91.06 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000001440 retrocopies