Parental gene:

TAF7L, ENSBTAG00000001979

Aliases:None
Description:None
Organism:Cow (Bos taurus)
Coordinates:X:55127018..55144665(-)


>ENSBTAG00000001979
ACAGAGCTCCCTGAGGCACGTCCCCTCAGTTTCTCGGAATTTAATCCAAAATCAGGAGTAATGAGCCTCCAAGATTCCCA
GATTCCTGCTGACCATGGAGCTGAAACTTCTGGCGATCATGGAGCCCAAACTGCTAGTGACCAAGGCATCCAAACTCCTG
CTGATGACCCTCCCGGTGATGCCGCCATTGCTGCCACTGGCACCCAGGCTGCTGTCCAAGCCTCAATGAATTTTCAGGAA
CTCGAAAAAAAAGAGATGAGTAGCAGCCAGGATGAACCTCCTCACGAACTTGAGAACCAGTTTATATTGCGTCTGCCTAT
GGAACATGCTTCCACTGTCAGAAAGATGGTGCATTCTGGAAGTTCCTCCATGAAGAATAAACTAAAAATTGACTTATTTT
CTGACACACGTCATGCAGTTGTTGAGGTAGACAATGTCTCACTAGCTGCTAAGCTGGTTGATTTGCCTTGTGTTATTGGA
AGCCTAAAAACTCTGGATAGAAAAAGTTTTTATAAAACGGCAGATGTTTCCCAGATGCTTGTGTGCACTGCTGATGCTGA
TGTTCAGCCTTCTCCTGAAGAACCAGTAACCTCTACTGATCCTAAAGCAATCAGGAAAGCTGAAAAGCAGAGAAAGAAAA
AATATACCTGGAAGCATGGCATTACTCCACCACTTAGGAATGTCAGAAAGAGAAAGTTCCGCAAAACAATAAAAAAGGTT
GCTGATTTCAAACAAATTGAAGAAATGGACCTTCCTGTGCACATTGAATCTCCTGAGGTGGAAAAGGAAGTGAAAAGACT
GCTGTGTTCAGATGCTGAAGCTGTCAATGCCCGGTGGGAGGTCATTGCTGAAGATGAAACCAAGGAAATAGAAAGTCAAG
GCTCCATTCCTGGCTATGCAATAGCCTCAGGAATGAGCGACTATAAGCAGCGTCATACCTTACCAGAATATTATGTGCTT
CAGGAGATGTGCAATGATTCTAGCAATAACACTGAGGAGGATGATAAAGACGAGGAGGAGGAGGAGGAGGACTATGATGA
TGAAGAGGAGGAAGATTATTATGACGAGGATATGGAAAGGGAGCTACAGACCAGGTTCACTGAATATGACCAGTATGAGG
CAAAGGAGGGAACCAGCTCAATGGTCATGGAAATTCAGAAGTACACTCAGTACGCAGAGAAAATGCTCCATGAGATTCAG
CGCAGGGCACAAAGACAGAAGGATCTCATCAGGAAAGTGGAAAACCTGACACTCAAGAATCATTTACACTCTGTGCTGGA
GCAGCTTAAGTTACAGGAAGAAGAAAAAACTGAGCAGCTCAGTTATCTACAGGAAAAACTGAACTATTTCCTGAAGAAGT
GA

Library Parental gene expression (RPM)
ERP005899_liver 0 .29 RPM
ERP005899_muscle 0 .05 RPM
SRP017611_brain 0 .41 RPM
SRP017611_kidney 0 .24 RPM
SRP017611_liver 0 .15 RPM
SRP030211_testis 25 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000009247 ortholog_one2one 1 retrogene
retro_amel_6,
Loxodonta africana ENSLAFG00000006941 ortholog_one2one 1 retrogene
retro_lafr_209,
Mus musculus ENSMUSG00000009596 ortholog_one2many 1 retrogene
retro_mmus_72,
Oryctolagus cuniculus ENSOCUG00000004497 ortholog_one2one 1 retrogene
retro_ocun_191,
Rattus norvegicus ENSRNOG00000026315 ortholog_one2many 1 retrogene
retro_rnor_134,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_107 66.33 54.75
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Download FASTA sequences of all ENSBTAG00000001979 retrocopies