Parental gene:

SNX12, ENSBTAG00000007871

Aliases:None
Description:sorting nexin-12 [Source:RefSeq peptide;Acc:NP_001096727]
Organism:Cow (Bos taurus)
Coordinates:X:84852013..84860773(+)


>ENSBTAG00000007871
ATGTCGGACACGGCAGTAGCTGACACTCGGCGCCTTAACTCGAAGCCGCAGGACCTGACCGACGCTTACGGGCCTCCGAG
TAACTTCCTGGAGATCGACATCTTTAATCCACAGACGGTGGGCGTGGGCCGCGCGCGCTTCACCACCTATGAGGTTCGCA
TGCGGACAAACCTACCTATCTTCAAACTAAAGGAGTCCTGTGTACGACGGCGCTACAGTGACTTTGAATGGCTAAAAAAT
GAGCTGGAGCGAGATAGTAAGATTGTAGTACCTCCACTCCCTGGGAAAGCCTTGAAGCGGCAGCTCCCTTTCCGAGGAGA
CGAAGGGATCTTTGAGGAGTCCTTTATTGAAGAAAGGAGGCAGGGCCTGGAACAGTTTATTAACAAAATTGCTGGGCACC
CACTGGCTCAGAATGAACGCTGCCTACACATGTTCCTGCAGGAGGAGGCAATTGACAGGAACTACGTCCCTGGGAAGGTG
CGCCAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 39 .10 RPM
SRP017611_kidney 52 .40 RPM
SRP017611_liver 17 .06 RPM
ERP005899_muscle 63 .45 RPM
ERP005899_liver 11 .97 RPM
SRP030211_testis 8 .44 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000018281 ortholog_one2many 1 retrogene
retro_dnov_9,
Oryctolagus cuniculus ENSOCUG00000014919 ortholog_one2one 1 retrogene
retro_ocun_1286,
Otolemur garnettii ENSOGAG00000008973 ortholog_one2one 1 retrogene
retro_ogar_2565,
Rattus norvegicus ENSRNOG00000004036 ortholog_one2one 2 retrogenes
retro_rnor_1751, retro_rnor_501,
Sorex araneus ENSSARG00000001830 ortholog_one2one 1 retrogene
retro_sara_452,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1080 68.66 80.86
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Download FASTA sequences of all ENSBTAG00000007871 retrocopies