Parental gene: | AFG3L2, ENSBTAG00000011250 |
| Aliases: | None |
| Description: | AFG3-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q2KJI7] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 24:43252926..43271906(-) |
>ENSBTAG00000011250
ATGGCGCACCGCTGCTTGCTGCTATGGGGCCGGGGCGCCTGCCGGCCCCGCGGGATGCCCCCGATGCTCTTGCCTGGCGG
CCGCACGGGCTCCACCGAACGGCTCTACCTGCGGATGCTTTATCGATATGCCACGACTCAGGCGAAAACCAGCAGGAATT
CCCTTCTGACAGATGTGATTGCTGCTTATCAGAGACTCTGTTCTCGGCCTCCAAAAGGATTTGAAAAATACTTTCCCAAT
GGAAAAAATGGAAAAAAAACTAGTGAACCTAAAGAAGTTATGGGAGAAAAAAAAGAACCCAAGCCAGCTGCTGCCCCGCG
TCCTTCTGGAGGAGGAGTTGGTGGCGGTGGAAAACGAGGCGGCAAGAAAGATGACTCTCACTGGTGGTCCAGGTTCCAGA
AGGGTGACATCCCATGGGATGATAAGGAATTCAAGATGTACTTTCTCTGGACCGCCCTGTTTTGGGGAGGATTCCTGTTT
TACTTCCTGTTCAAGAGCTCCGGGAGAGAAATCACGTGGAAGGACTTTGCTAACAACTATCTTTCCAAGGGAGTTGTAGA
CAGACTGGAAGTTGTCAACAAGCGATTTGTTCGAGTGACTTTTACACCAGGAAAAACTCCTGTTGATGGACAGTACGTCT
GGTTCAATATTGGCAGTGTGGACACCTTTGAGCGGAACCTGGAGACGCTGCAGCAGGAACTAGGCATAGAAGGAGAGAAC
CGGGTCCCTGTGGTCTACATCGCCGAGAGTGACGGCTCCTTCCTCCTGAGCATGCTGCCCACCGTGCTCATCATCGCCTT
CCTGCTCTACACCATCCGGAGGGGCCCAGCCGGCATCGGCCGCACAGGCCGGGGCATGGGCGGACTCTTCAGTGTTGGAG
AGACCACCGCCAAGGTCCTCAAGGATGAGATTGACGTGAAGTTCAAAGACGTGGCCGGCTGTGAGGAGGCCAAGCTGGAG
ATCATGGAATTTGTGAATTTCCTAAAAAATCCAAAGCAGTATCAAGACCTGGGAGCAAAAATCCCAAAGGGTGCCATTCT
CACTGGTCCTCCAGGCACTGGGAAGACACTGCTGGCTAAGGCCACGGCTGGAGAAGCCAATGTCCCTTTCATCACCGTTA
GCGGGTCTGAGTTCTTGGAGATGTTTGTTGGTGTAGGCCCAGCTAGAGTCCGTGACTTATTCGCTCTTGCTCGGAAGAAC
GCCCCTTGCATCCTCTTCATCGATGAAATAGATGCGGTGGGAAGGAAGAGAGGCAGGGGCAACTTCGGCGGGCAGAGTGA
GCAGGAGAACACGCTCAACCAGCTGCTTGTGGAGATGGACGGATTTAACACAACAACCAATGTGGTCATCTTGGCGGGCA
CCAACCGACCGGATATCCTAGACCCAGCTCTGATGAGGCCAGGCCGCTTCGACAGGCAGATCTTCATTGGACCGCCGGAC
ATTAAGGGAAGAGCCTCTATTTTCAAAGTTCATCTCCGACCCCTGAAGCTGGATAGCACCCTGGAAAAGGAGAAGCTGGC
GAGGAAGCTCGCATCCTTGACCCCGGGGTTTTCAGGAGCCGATGTTGCCAACGTGTGCAACGAAGCTGCTTTGATCGCTG
CGAGACACCTTTCAGATTCCATAAACCAGAAACACTTTGAACAAGCAATTGAACGAGTGATTGGCGGCTTAGAGAAGAAA
ACGCAGGTCCTACAGCCTGAGGAGAAGAAGACAGTGGCATACCATGAGGCAGGCCACGCAGTTGCCGGTTGGTACCTGGA
GCACGCAGACCCCCTCTTGAAGGTGTCCATCATCCCACGAGGCAAAGGGCTGGGCTACGCTCAGTACCTGCCCCGGGAGC
AGTACCTCTACACCCGGGAGCAGCTCCTGGACCGCATGTGCATGACCTTGGGCGGCCGCGTGTCCGAGGAGATCTTCTTT
GGCAGGATCACTACCGGTGCCCAGGACGACTTGCGCAAAGTGACCCAGAGTGCGTACGCCCAGATTGTTCAGTTTGGCAT
GAACGAGAAGGTCGGGCAGATCTCCTTTGACCTCCCACGTCAGGGGGACATGGTGTTGGAGAAGCCGTACAGCGAGGCCA
CCGCCAGACTCATAGATGACGAAGTACGAATCCTTATCAACGATGCTTACAAGAGGACAGTGGCCCTCCTCACAGAGAAG
AAAGCTGACGTGGAGAAGGTTGCTCTGCTGTTGTTAGAAAAAGAAGTGTTAGACAAGAACGACATGGTGGAACTTCTGGG
CCCCAGGCCATTTGCGGAGAAGTCTACGTACGAGGAGTTTGTGGAAGGCACTGGTAGCCTAGACGAGGACACCTCACTCC
CCGAGGGCCTGAAGGACTGGAACAGGGAGCGTGAGGGCTCAGAGGAGCCCTCGGGCGAGAAGGTGACCAGCCCGGTCCAG
GGTGCCGGCCCTGCGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 18 .02 RPM |
| ERP005899_muscle | 75 .17 RPM |
| SRP017611_brain | 79 .76 RPM |
| SRP017611_kidney | 132 .53 RPM |
| SRP017611_liver | 35 .04 RPM |
| SRP030211_testis | 155 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000038051 | within_species_paralog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_958 | 89.91 | 53.42 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000011250 retrocopies