Parental gene: | BT.65854, ENSBTAG00000012873 |
| Aliases: | None |
| Description: | sorting nexin-6 [Source:RefSeq peptide;Acc:NP_001039796] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 21:45418668..45454655(-) |
>ENSBTAG00000012873
CTTAAAGCAATAAATGTAGATCTTCAGAGTGATGCTGCTCTGCAGGTGGACATTTCTGATGCTCTGAGTGAGAGAGACAA
AGTAAAATTCACTGTTCACACAAAGAGTTCATTGCCAAATTTTAAACAGAATGAGTTTTCTGTTGTTCGACAACATGAGG
AATTTATCTGGCTTCACGATTCCTTCATTGAAAATGAAGACTATGCAGGTTACATTATCCCTCCAGCACCACCAAGACCT
GATTTTGATGCCTCAAGGGAGAAACTACAGAAACTTGGAGAAGGAGAAGGGTCTATGACAAAGGAGGAATTCACGAAGAT
GAAACAGGAATTGGAAGCTGAGTATTTGGCAATATTCAAGAAGACGGTTGCAATGCATGAAGTGTTTCTGTGTCGTGTGG
CTGCACATCCCATTTTGAGGAAAGATTTAAATTTCCATGTCTTCCTGGAATATAATCAAGATTTGAGTGTGCGAGGAAAA
AATAAAAAAGAGAAACTGGAAGATTTCTTTAAAAACATGGTTAAATCAGCAGATGGAGTAATTGTTTCTGGAGTAAAGGA
TGTAGATGATTTCTTTGAGCATGAACGAACATTCCTTTTAGAATATCATAACCGAGTTAAGGATGCATCTGCTAAATCTG
ATAGGATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGTTCTTCATTATATGCTTTAGGAACTCAG
GATTCTACAGATATATGCAAGTTTTTTCTTAAAGTTTCAGAACTGTTCGATAAGACGAGAAAAATAGAAGCACGAGTGTC
AGCTGATGAGGACCTCAAACTTTCTGACCTTTTGAAATATTACTTAAGAGAATCCCAAGCTGCTAAGGATCTCCTCTATC
GAAGATCTAGGTCATTAGTGGATTATGAAAATGCCAATAAAGCACTGGATAAAGCAAGAGCGAAAAATAAAGATGTTCTG
CAGGCTGAAACATCCCAACAGTTATGTTGTCAGAAATTTGAAAAAATATCTGAATCTGCAAAACAAGAACTTATAGATTT
TAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTGGCAGAGTTAGAACTGAAGCATGCAAAGGGTAATC
TACAATTGCTGCAGAACTGCCTGGCAGTGCTCAATGGAGACACATAA
CTTAAAGCAATAAATGTAGATCTTCAGAGTGATGCTGCTCTGCAGGTGGACATTTCTGATGCTCTGAGTGAGAGAGACAA
AGTAAAATTCACTGTTCACACAAAGAGTTCATTGCCAAATTTTAAACAGAATGAGTTTTCTGTTGTTCGACAACATGAGG
AATTTATCTGGCTTCACGATTCCTTCATTGAAAATGAAGACTATGCAGGTTACATTATCCCTCCAGCACCACCAAGACCT
GATTTTGATGCCTCAAGGGAGAAACTACAGAAACTTGGAGAAGGAGAAGGGTCTATGACAAAGGAGGAATTCACGAAGAT
GAAACAGGAATTGGAAGCTGAGTATTTGGCAATATTCAAGAAGACGGTTGCAATGCATGAAGTGTTTCTGTGTCGTGTGG
CTGCACATCCCATTTTGAGGAAAGATTTAAATTTCCATGTCTTCCTGGAATATAATCAAGATTTGAGTGTGCGAGGAAAA
AATAAAAAAGAGAAACTGGAAGATTTCTTTAAAAACATGGTTAAATCAGCAGATGGAGTAATTGTTTCTGGAGTAAAGGA
TGTAGATGATTTCTTTGAGCATGAACGAACATTCCTTTTAGAATATCATAACCGAGTTAAGGATGCATCTGCTAAATCTG
ATAGGATGACAAGATCCCACAAAAGTGCTGCAGATGATTACAATAGAATTGGTTCTTCATTATATGCTTTAGGAACTCAG
GATTCTACAGATATATGCAAGTTTTTTCTTAAAGTTTCAGAACTGTTCGATAAGACGAGAAAAATAGAAGCACGAGTGTC
AGCTGATGAGGACCTCAAACTTTCTGACCTTTTGAAATATTACTTAAGAGAATCCCAAGCTGCTAAGGATCTCCTCTATC
GAAGATCTAGGTCATTAGTGGATTATGAAAATGCCAATAAAGCACTGGATAAAGCAAGAGCGAAAAATAAAGATGTTCTG
CAGGCTGAAACATCCCAACAGTTATGTTGTCAGAAATTTGAAAAAATATCTGAATCTGCAAAACAAGAACTTATAGATTT
TAAGACAAGAAGAGTTGCTGCATTCAGAAAAAATTTAGTGGAACTGGCAGAGTTAGAACTGAAGCATGCAAAGGGTAATC
TACAATTGCTGCAGAACTGCCTGGCAGTGCTCAATGGAGACACATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 18 .00 RPM |
| SRP017611_kidney | 34 .73 RPM |
| SRP017611_liver | 9 .89 RPM |
| ERP005899_muscle | 49 .04 RPM |
| ERP005899_liver | 23 .29 RPM |
| SRP030211_testis | 56 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000006862 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000003310 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005736 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000006253 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_870 | 94.12 | 61.34 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000012873 retrocopies