Parental gene:

CAP1, ENSBTAG00000013363

Aliases:None
Description:Adenylyl cyclase-associated protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q3SYV4]
Organism:Cow (Bos taurus)
Coordinates:3:106638794..106667878(-)


>ENSBTAG00000013363
ATGGCTGACATGCGAAATCTGGTAGAAAGATTGGAGAGAGTGGTGGGCCGCCTGGAGGCAGTCTCCCATGCCTCTGACAC
ACACTGTGGGTATGGAGACAGTGCTGCAAAAGGAACGACTCCATATGTGCAAGCATTTGACTCACTGCTGGCCGGTCCTG
TGGCAGAGTACCTCAAGATCAGTAAAGAGATTGGGGGAGATGTGCAGAAACATGCGGAGATGGTCCACACAGGTCTGAAG
TTAGAGCGAGCTCTCTTGGTTACAGCCTCTCAGTGCCAGCAGCCAGCAGGCAACAAGCTTTCTGACTTGTTGGCACCCAT
CTCCGAGCAGATCCAAGAAGTGGTGACCTTCCGGGAGAAGAACCGAGGCAGCAAGTTGTTCAATCACCTATCAGCTGTCA
GCGAAAGTATCCAGGCCCTGGGTTGGGTGGCTATGGCTCCCAAGCCTGGTCCCTATGTGAAGGAAATGAATGATGCTGCC
ATGTTTTATACAAATCGAGTCCTCAAGGAGTACAAAGATGTGGATAAAAAGCACGTGGACTGGGTCAAAGCTTACTTGAG
TATATGGACAGAGCTGCAGGCTTACATTAAGGAGTTCCATACCACCGGACTGGCCTGGAGCAGAACAGGGCCTGTGGCAA
AAGAACTGAGTGGCTTGCCATCTGGACCCTCTGCTGGATCTGGTCCTCCTCCTCCCCCCCCAGGCCCACCTCCCCCTCCA
GTCCCCACCAGTTCAGGCTCAGATGACTCTGCTTCACGCTCAGCACTGTTTGCGCAGATTAATCAGGGGGAGAGCATCAC
ACATGCCCTGAAACACGTATCTGATGACATGAAGACTCACAAGAACCCTGCCTTGAAGGCTCAGAGTGGTCTGATACGAA
GTGGCCCCAAACCCTTCTCTGCATCTAAACCAGATCCCCCCAAACCAGTCGCAAAGAAGGAGCCAGCCCTACTTGAACTG
GAGGGCAAGAAGTGGAGAGTGGAAAATCAGGAGAATGTTTCCAACCTGATGATAGAGGATACAGAGCTGAAACAGGTGGC
TTACATATTCAAGTGTGTGAACTCAACATTGCAGATCAAGGGCAAAATTAACTCCATTACTGTAGATAACTGTAAGAAAC
TTGGTCTGGTGTTTGATGACGTGGTGGGCATTGTGGAGATAATCAATAGTAAGGATGTCAAAGTTCAGGTAATGGGTAAA
GTGCCAACCATTTCCATCAACAAAACAGATGGCTGCCACGTTTACCTGAGCAAGAACTCCCTGGATTGTGAGATAGTCAG
TGCCAAATCTTCTGAGATGAATGTCCTCATTCCTACAGAAGGCGGTGACTTCAATGAGTTCCCAGTCCCTGAGCAGTTTA
AGACCCTATGGAATGGGCAGAAGTTGGTCACCACAGTGACAGAAATTGCTGGATAA

Library Parental gene expression (RPM)
ERP005899_liver 76 .78 RPM
ERP005899_muscle 313 .62 RPM
SRP017611_brain 153 .39 RPM
SRP017611_kidney 211 .54 RPM
SRP017611_liver 71 .58 RPM
SRP030211_testis 164 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004417 ortholog_one2one 1 retrogene
retro_amel_1891,
Canis familiaris ENSCAFG00000003012 ortholog_one2one 2 retrogenes
retro_cfam_1316, retro_cfam_645,
Equus caballus ENSECAG00000024658 ortholog_one2one 1 retrogene
retro_ecab_119,
Macropus eugenii ENSMEUG00000004960 ortholog_one2one 1 retrogene
retro_meug_544,
Tursiops truncatus ENSTTRG00000004358 ortholog_one2one 1 retrogene
retro_ttru_1689,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_460 93.86 100.00
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Download FASTA sequences of all ENSBTAG00000013363 retrocopies