Parental gene:

PSMB6, ENSBTAG00000013390

Aliases:None
Description:Proteasome subunit beta type-6 [Source:UniProtKB/Swiss-Prot;Acc:Q3MHN0]
Organism:Cow (Bos taurus)
Coordinates:19:27198592..27200805(-)


>ENSBTAG00000013390
ATGGCGGCCACCTTAGTAGCAGCTCGGGGGACCAGGCCGGCACCAGCCTGGGGGCCTGAGGCTATTGCCCCCGACTGGGA
GAACCGGGAAGTTTCCACAGGGACCACTATCATGGCCGTGCAATTTGATGGGGGCGTGGTTCTAGGAGCTGACTCCAGAA
CAACCACTGGGTCGTACATTGCCAATCGAGTGACTGACAAGCTGACCCCTATTCACGACCGTATTTTCTGCTGCCGCTCA
GGCTCAGCCGCTGATACCCAAGCAGTAGCTGATGCAGTCACTTATCAGCTTGGTTTCCACAGCATTGAGCTGAATGAGCC
TCCGCTGGTGCACACGGCGGCCAGCCTCTTTAAGGAGATGTGTTACCGATATCGAGAAGACCTGATGGCAGGAATCATCA
TTGCCGGCTGGGACCCCCAAGAAGGGGGACAGGTGTACTCGGTGCCTATGGGGGGTATGATGGTACGACAGCCCTTTGCC
ATTGGGGGCTCTGGGAGCTCCTATATCTATGGCTATGTGGATGCTACCTACCGGGAAGGCATGACCAAGGAAGAATGCCT
GCAGTTCACTGCCAATGCTCTCGCTTTGGCAATGGAGCGGGATGGCTCTAGTGGAGGGGTGATCCGCCTGGCAGCCATTG
CAGAACCAGGGGTAGAGCGGCAGGTACTTCTGGGAGACCAGATTCCCAAGTTCACCATTGCCACTTTACCGCCTCTCTGA

Library Parental gene expression (RPM)
ERP005899_liver 11 .97 RPM
ERP005899_muscle 49 .73 RPM
SRP017611_brain 26 .08 RPM
SRP017611_kidney 39 .42 RPM
SRP017611_liver 33 .53 RPM
SRP030211_testis 29 .97 RPM



Species Parental gene accession Homology type Retrogenes number
Loxodonta africana ENSLAFG00000012859 ortholog_one2one 1 retrogene
retro_lafr_874,
Macropus eugenii ENSMEUG00000010676 ortholog_one2one 1 retrogene
retro_meug_621,
Monodelphis domestica ENSMODG00000005554 ortholog_one2many 1 retrogene
retro_mdom_799,
Otolemur garnettii ENSOGAG00000009653 ortholog_one2one 1 retrogene
retro_ogar_2114,
Pteropus vampyrus ENSPVAG00000006048 ortholog_one2one 1 retrogene
retro_pvam_618,
Rattus norvegicus ENSRNOG00000019551 possible_ortholog 1 retrogene
retro_rnor_56,
Sorex araneus ENSSARG00000006615 ortholog_one2one 1 retrogene
retro_sara_689,
Tarsius syrichta ENSTSYG00000010674 ortholog_one2one 1 retrogene
retro_tsyr_1807,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_534 70.17 98.74
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_btau_1734 78.21 64.44
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSBTAG00000013390 retrocopies