Parental gene: | RYK, ENSBTAG00000016999 |
| Aliases: | None |
| Description: | None |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 1:136207772..136291018(+) |
>ENSBTAG00000016999
GGAGGTATGAGAGCCCCACCTGGACCTCTCTGCACACCACAAGGTGTTGTGCCTGTCTCTTTTCCTAAATCCTCATCAGT
TTTGCAGGGTAAAGGGGCTTTTGTCTGTAGGCACTTATCTGAGAAGTCTTTGTCCAAAAGCCTAGGTCTTGATGCAGAAC
TTTATTATGTGAGAAATGACCTTATTAGTCACTACGCTCTATCCTTTAACCTGTTAGTACCCAGCGAGACAAATTTCCTG
CACTTCACTTGGCATGCAAAGTCCAAGGTTGAATATAAGCTGGGATTCCAAGTAGACAATTTTGTGGCTATGGACATGCC
CCAGGTCAACATTTCTGCTCAGGGGGAAGTTCCACGCACTTTATCAGCAGTGTTTCGGGTCGAGCTTTCCTGTACTGGCA
AAGTAGATTCTGAGGTTATGATACTCATGCAGCTCAACTTGACAGTAAATTCTTCAAAAAACTTTACAGTCTTAAATTTT
AAACGAAGGAAAATGTGCTATAAAAAACTTGAAGAAGTAAAAACTTCAGCCTTGGACAAAAACACTAGCAGAACTATTTA
TGATCCTGTACATGCAGCTCCAACCACTTCTACGCGTGTGTTTTATATCAGCGTAGGGGTTTGCTGTGCAGTAATATTTC
TTGTAGCAATAATATTAGCTGTTTTGCACCTTCATAGTATGAAAAGGATTGAACTGGATGACAGCATCAGTGCCAGCAGT
AGTTCCCAAGGGCTGTCTCAGCCATCTACCCAGACGACTCAGTATCTGAGAGCCGACACACCCAACAATGCAACTCCTAT
TACCAGCTCCTCAGGTTATCCTACCTTGCGGATAGAGAAGAATGACCTGAGAAGTGTCACTCTTTTGGAGGCGAAAGCTA
AGGTGAAGGATATCGCAATATCCAGGGAGAGGATAACTCTAAAAGATGTACTCCAAGAAGGTACTTTTGGGCGTATTTTC
CATGGGATTTTAGTAGATGAAAAAGATCCAAATAAAGAAAAACAAGCATTTGTGAAAACAGTTAAAGATACAGATCAAGC
TTCTGAAATTCAGGTGACAATGATGCTCACCGAAAGTTGTAAGCTCCGAGGTCTTCATCACAGAAATCTTCTTCCTATTA
CCAATGTGTGTATAGAAGAAGGAGAAAAGCCCATGGTGATATTGCCTTACATGAATTGGGGGAATCTTAAATTGTTTTTA
CGGCAGTGCAAATTAGTAGAGGCCAATAATCCGCAGGCAATTTCTCAACAAGACCTGGTCCACATGGCTATTCAGATTGC
CTGTGGAATGAGCTATCTGGCCAGAAGGGAAGTCATCCACAAAGACCTGGCTGCTAGGAACTGCGTCATTGATGACACAC
TTCAAGTTAAGATCACAGACAATGCCCTCTCTAGAGACTTGTTCCCCATGGACTATCATTGTTTGGGAGACAATGAAAAC
AGGCCGGTTAGGTGGATGGCTCTTGAAAGTCTGGTTAATAATGAGTTCTCCAGCGCTAGTGATGTGTGGGCCTTTGGAGT
GACGCTGTGGGAACTCATGACTCTGGGCCAGACACCCTACGTGGACATCGACCCGTTTGAGATGGCCGCATACTTGAAAG
ATGGTTACCGGATAGCCCAGCCAATCAACTGTCCTGATGAACTATTTGCCGTGATGGCTTGTTGCTGGGCCTTAGATCCG
GAGGAGAGGCCCAAGTTCCAGCAGCTGGTCCAGTGTCTCACAGAGTTCCATGCAGCCCTGGGGGCCTATGTCTGA
GGAGGTATGAGAGCCCCACCTGGACCTCTCTGCACACCACAAGGTGTTGTGCCTGTCTCTTTTCCTAAATCCTCATCAGT
TTTGCAGGGTAAAGGGGCTTTTGTCTGTAGGCACTTATCTGAGAAGTCTTTGTCCAAAAGCCTAGGTCTTGATGCAGAAC
TTTATTATGTGAGAAATGACCTTATTAGTCACTACGCTCTATCCTTTAACCTGTTAGTACCCAGCGAGACAAATTTCCTG
CACTTCACTTGGCATGCAAAGTCCAAGGTTGAATATAAGCTGGGATTCCAAGTAGACAATTTTGTGGCTATGGACATGCC
CCAGGTCAACATTTCTGCTCAGGGGGAAGTTCCACGCACTTTATCAGCAGTGTTTCGGGTCGAGCTTTCCTGTACTGGCA
AAGTAGATTCTGAGGTTATGATACTCATGCAGCTCAACTTGACAGTAAATTCTTCAAAAAACTTTACAGTCTTAAATTTT
AAACGAAGGAAAATGTGCTATAAAAAACTTGAAGAAGTAAAAACTTCAGCCTTGGACAAAAACACTAGCAGAACTATTTA
TGATCCTGTACATGCAGCTCCAACCACTTCTACGCGTGTGTTTTATATCAGCGTAGGGGTTTGCTGTGCAGTAATATTTC
TTGTAGCAATAATATTAGCTGTTTTGCACCTTCATAGTATGAAAAGGATTGAACTGGATGACAGCATCAGTGCCAGCAGT
AGTTCCCAAGGGCTGTCTCAGCCATCTACCCAGACGACTCAGTATCTGAGAGCCGACACACCCAACAATGCAACTCCTAT
TACCAGCTCCTCAGGTTATCCTACCTTGCGGATAGAGAAGAATGACCTGAGAAGTGTCACTCTTTTGGAGGCGAAAGCTA
AGGTGAAGGATATCGCAATATCCAGGGAGAGGATAACTCTAAAAGATGTACTCCAAGAAGGTACTTTTGGGCGTATTTTC
CATGGGATTTTAGTAGATGAAAAAGATCCAAATAAAGAAAAACAAGCATTTGTGAAAACAGTTAAAGATACAGATCAAGC
TTCTGAAATTCAGGTGACAATGATGCTCACCGAAAGTTGTAAGCTCCGAGGTCTTCATCACAGAAATCTTCTTCCTATTA
CCAATGTGTGTATAGAAGAAGGAGAAAAGCCCATGGTGATATTGCCTTACATGAATTGGGGGAATCTTAAATTGTTTTTA
CGGCAGTGCAAATTAGTAGAGGCCAATAATCCGCAGGCAATTTCTCAACAAGACCTGGTCCACATGGCTATTCAGATTGC
CTGTGGAATGAGCTATCTGGCCAGAAGGGAAGTCATCCACAAAGACCTGGCTGCTAGGAACTGCGTCATTGATGACACAC
TTCAAGTTAAGATCACAGACAATGCCCTCTCTAGAGACTTGTTCCCCATGGACTATCATTGTTTGGGAGACAATGAAAAC
AGGCCGGTTAGGTGGATGGCTCTTGAAAGTCTGGTTAATAATGAGTTCTCCAGCGCTAGTGATGTGTGGGCCTTTGGAGT
GACGCTGTGGGAACTCATGACTCTGGGCCAGACACCCTACGTGGACATCGACCCGTTTGAGATGGCCGCATACTTGAAAG
ATGGTTACCGGATAGCCCAGCCAATCAACTGTCCTGATGAACTATTTGCCGTGATGGCTTGTTGCTGGGCCTTAGATCCG
GAGGAGAGGCCCAAGTTCCAGCAGCTGGTCCAGTGTCTCACAGAGTTCCATGCAGCCCTGGGGGCCTATGTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .61 RPM |
| SRP017611_kidney | 36 .33 RPM |
| SRP017611_liver | 19 .93 RPM |
| ERP005899_muscle | 23 .49 RPM |
| ERP005899_liver | 18 .10 RPM |
| SRP030211_testis | 26 .51 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000016402 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000004507 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000003760 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_790 | 66.31 | 62.50 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_793 | 64.48 | 65.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000016999 retrocopies