Parental gene: | VAPB, ENSBTAG00000017424 |
| Aliases: | None |
| Description: | Vesicle-associated membrane protein-associated protein B [Source:UniProtKB/Swiss-Prot;Acc:A2VDZ9] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 13:58463227..58510710(-) |
>ENSBTAG00000017424
ATGGCGAAGGTGGAGCAGGTCCTGAGCCTCGAGCCGCAGCACGAGCTCAAATTCCGAGGTCCTTTCACCGATGTTGTCAC
CACCAACCTGAAGCTTGGCAACCCGACAGATCGAAATGTGTGTTTTAAAGTGAAGACCACGGCACCACGTAGGTACTGCG
TGAGGCCCAACAGTGGGATCATTGATGCAGGGGCCTCGATTAACGTATCTGTGATGTTACAGCCTTTCGATTATGATCCC
AATGAGAAAAGTAAACACAAGTTTATGGTTCAGTCTATGTTTGCTCCAACTGACACTTCTGATATGGAAGCAGTATGGAA
GGAGGCAAAACCGGAAGACCTTATGGATTCAAAACTTAGATGTGTGTTTGAATTGCCAGCAGAAAATGATAAACCACATG
ATGTAGAAATAAATAAAATTATACCCACAACTGCATCAAAGACAGAAACACCAACGGTGTCTAAAGCTCTGAGTTCCTCC
TTGGATGACACTGAAGTTAAGAAGGTGATGGAAGAGTGTAAGAGGCTGCAGAGCGAAGTCCAGAGGCTTCGGGAGGAGAA
CAAGCAGTTCAAGGAGGAAGACGGCCTTCGGATGAGGAAGACAGCACAGAGCAACAGCCCCGCTCCCGCGTCAGCCATGG
CTGGGAAGGAGGAGGGCCTGAGCACCCGGCTGCTGGCGCTTGTCGTCCTCTTCTTCATCGTTGGCGTGATCATAGGGAAG
ATCGCCTTGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 32 .01 RPM |
| ERP005899_muscle | 73 .69 RPM |
| SRP017611_brain | 74 .32 RPM |
| SRP017611_kidney | 76 .99 RPM |
| SRP017611_liver | 50 .44 RPM |
| SRP030211_testis | 17 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000012711 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009788 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016549 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000009351 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1010 | 93.03 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000017424 retrocopies