Parental gene: | GIN1, ENSBTAG00000021471 |
| Aliases: | None |
| Description: | Gypsy retrotransposon integrase-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:A4FUB7] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 7:104530076..104559401(-) |
>ENSBTAG00000021471
ATGGTTCGTAGTGGAAAAAATGGTGACCTTCATCTTAAACAGATTGCATATTATAAACGAACTGGTGAATATCATCCAAC
TACACTGCCTAGTGAGAGAAGTGGCATAAGAAGAGCAGCAAAAAAATTTGTCTTCAAAGAAAAAAAGAAAGTCCTAAGAG
AATGCCATGAAAATGACACTGGAGCCCATCATGGCATATCCAGAACCCTTACTCTAGTGGAATCCAGTTACTATTGGACT
TCTGTGACCAATGATGTCAAACAGTGGGTATATGCTTGTCAGCATTGCCAAGTGGCAAAAAATACAGTTATTCTAGCACC
TAAACAGCACCTTCTCAAAGTGGAGAATCCATGGAGTATAGTTACTGTTGATCTGATGGGCCCATTTCATACAAGCAACA
GAAGTCATGTATATGCTATAATCATGACAGATTTGTTCACAAAATGGGTTGTGATTTTGCCTCTTTGTGATGTTTCAGCA
TCAGAAATTTCTAAAGCTATTATCAACATATTTTTCTTATATGGGCCTCCTCAGAAAATAATAATGGACCAAAGAGATGA
ATTCATTCATCAGATCAATGTAGAGCTATGTGAATTGTTTGGCACAAAGCAAATTGTTATTTCTCATGCCTCCCAAACAA
TTAATCCAGCTGAAAGTACACCTAGCACTATCAAAACCTTTCTTTCCAAACATTGTGTGGACTACCCAAACGACTGGGAT
GACCACCTGCCAGCTGTTTCATTTGCCTTCAACGTCACTCACTTGGAACCTACTAAAAATACACCATATTTTCAAATGTT
TAATCGAAATCCTTACATGCCTGAATCTTCAGATATTCGTGAAGTGGATGGTGATAATACAAGTATGTTTGCCAAAATTC
TAGATGCAATTAAAGAAGCTGATAAAATAATGGAGAATAAGACAACTTCAGTGGGCCAGATGGAGAACAACAATTGTCAT
GAATTAAATAAAAGCAAAATCATTGTTAAAAAGAAACCGAAGCAACAAAATCCATTTCATCTGAAAGTGGGTCATGAAGT
GTTAAGGCAGAGGAAAAACTGGTGGAAGGATGGTCGCTTCCGGTCTGAATGGGTCGGCCCTTGTGTCATAGACTACATTA
CGGAGAACGGGGGCGCTGTTCTGCGAGACAGCTCTGGGGCTAGACTTAAACGACCTATCAAGATGTCCCACCTGAAGCCC
TATGTCAGAGAATCGGGTGAACAAGATAGTCTCCATCTCTTACACGGTTCAGTGGTGGCGGATCATGACTATGTTGGAAT
GCCCGAGCTGCCAGTTGGAGCATACCAAGCAAGTATTCTGGTGGAAGATGCGGCTATTGGAGTAGACGACAGTGAGTTAC
TGACGTCAAGCAAGGATCGTGAACTATTAGAATACAGAAATGCCAAAATCTCTCCATTGATGGAAGATCATAATGCTCTT
GAAAAGCAGACTTTTAGTCTCTTGGACTCTTCAAACCAAGTCCTTGAGTACTTAACTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| ERP005899_liver | 6 .49 RPM |
| ERP005899_muscle | 2 .16 RPM |
| SRP017611_brain | 3 .43 RPM |
| SRP017611_kidney | 5 .28 RPM |
| SRP017611_liver | 3 .78 RPM |
| SRP030211_testis | 38 .12 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000008147 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_598 | 96.26 | 90.98 | Please wait, loading  |
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Download FASTA sequences of all ENSBTAG00000021471 retrocopies