Parental gene: | ACADM, ENSBTAG00000024240 |
| Aliases: | None |
| Description: | Medium-chain specific acyl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q3SZB4] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 3:69344156..69382504(-) |
>ENSBTAG00000024240
ATGATCGCGCTGTTTAGGCGAAGCTGCGGGGTACTGAGAAGTCTTTCTCATTTTGACTGGAGATCACAACATACAAAAAC
TGCCCTACAACGTGAGCCAGGATCAGGATTTAGTTTTGAATTCACTGAACAACAGAAAGAATTTCAAGCTACTGCTCGTA
AATTTGCCAGGGAGGAAATAATTCCACTTGCTGCAGAATATGATAAAACCGGCGAGTACCCTGTCCCATTAATTAAAAGA
GCCTGGGAGCTTGGTTTAATGAATACACACATTCCAGAAAGTTGTGGAGGTCTTGGACTTGGAACTTTTGATAGCTGTTT
AATTTCTGAAGAATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTGAAGCAAATTCTCTAGGGCAAATGCCTGTTA
TTATTGCTGGAAATGATCAACAACAAAAGAAATATTTGGGGAGAATGACTGAGGAGCCATTAATGTGTGCCTATTGTGTA
ACAGAACCTGTAGCAGGCTCTGATGTAGCTGGTATAAAAACCAAAGCAGAAAAGAAAGGAGATGAGTATATTATTAATGG
TCAGAAGATGTGGATCACCAATGGAGGAAAAGCTAATTGGTATTTTTTATTGGCTCGTTCTGATCCGGATCCTAAGGCTC
CTGCTAGTAAAGCCTTTACTGGCTTTATTGTGGAAGCAGACACCCCAGGAGTACAGATTGGAAGAAAGGAATTAAATATG
GGACAGCGATGTTCAGATACAAGAGGAATTGTCTTTGAAGATGTGAGAGTGCCCAAGGAAAATGTTTTAATTGGTGAGGG
AGCTGGTTTCAAAATTGCAATGGGAGCATTTGATAAAACCAGACCACCAGTAGCAGCTGCTGCTGTGGGACTAGCACAGA
GAGCTTTGGATGAAGCTACCAAGTATGCCCTGGAGAGAAAAACTTTTGGAAAGCTGCTTATAGAGCACCAAGGAATATCA
TTTTTGCTGGCTGAAATGGCAATGAAAGTTGAACTAGCTAGATTGAGTTACCAGAGAGCAGCTTGGGAAGTTGATTCTGG
TCGCCGAAATACCTATTATGCCTCTATTGCAAAGGCATATGCTGGAGATATCGCAAATCAGTTAGCTTCTGATGCTGTTC
AGATTTTTGGAGGCAATGGATTTAATACTGAATATCCTGTAGAAAAATTAATGAGAGATGCCAAGATCTATCAGATTTAT
GAAGGTACAGCACAAATTCAAAGGCTTATTATAGCCCGTGAACACATTGGCAGGTATAAGAAGTAA
ATGATCGCGCTGTTTAGGCGAAGCTGCGGGGTACTGAGAAGTCTTTCTCATTTTGACTGGAGATCACAACATACAAAAAC
TGCCCTACAACGTGAGCCAGGATCAGGATTTAGTTTTGAATTCACTGAACAACAGAAAGAATTTCAAGCTACTGCTCGTA
AATTTGCCAGGGAGGAAATAATTCCACTTGCTGCAGAATATGATAAAACCGGCGAGTACCCTGTCCCATTAATTAAAAGA
GCCTGGGAGCTTGGTTTAATGAATACACACATTCCAGAAAGTTGTGGAGGTCTTGGACTTGGAACTTTTGATAGCTGTTT
AATTTCTGAAGAATTGGCTTATGGATGTACAGGGGTTCAGACTGCTATTGAAGCAAATTCTCTAGGGCAAATGCCTGTTA
TTATTGCTGGAAATGATCAACAACAAAAGAAATATTTGGGGAGAATGACTGAGGAGCCATTAATGTGTGCCTATTGTGTA
ACAGAACCTGTAGCAGGCTCTGATGTAGCTGGTATAAAAACCAAAGCAGAAAAGAAAGGAGATGAGTATATTATTAATGG
TCAGAAGATGTGGATCACCAATGGAGGAAAAGCTAATTGGTATTTTTTATTGGCTCGTTCTGATCCGGATCCTAAGGCTC
CTGCTAGTAAAGCCTTTACTGGCTTTATTGTGGAAGCAGACACCCCAGGAGTACAGATTGGAAGAAAGGAATTAAATATG
GGACAGCGATGTTCAGATACAAGAGGAATTGTCTTTGAAGATGTGAGAGTGCCCAAGGAAAATGTTTTAATTGGTGAGGG
AGCTGGTTTCAAAATTGCAATGGGAGCATTTGATAAAACCAGACCACCAGTAGCAGCTGCTGCTGTGGGACTAGCACAGA
GAGCTTTGGATGAAGCTACCAAGTATGCCCTGGAGAGAAAAACTTTTGGAAAGCTGCTTATAGAGCACCAAGGAATATCA
TTTTTGCTGGCTGAAATGGCAATGAAAGTTGAACTAGCTAGATTGAGTTACCAGAGAGCAGCTTGGGAAGTTGATTCTGG
TCGCCGAAATACCTATTATGCCTCTATTGCAAAGGCATATGCTGGAGATATCGCAAATCAGTTAGCTTCTGATGCTGTTC
AGATTTTTGGAGGCAATGGATTTAATACTGAATATCCTGTAGAAAAATTAATGAGAGATGCCAAGATCTATCAGATTTAT
GAAGGTACAGCACAAATTCAAAGGCTTATTATAGCCCGTGAACACATTGGCAGGTATAAGAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 27 .86 RPM |
| SRP017611_kidney | 293 .16 RPM |
| SRP017611_liver | 119 .08 RPM |
| ERP005899_muscle | 43 .50 RPM |
| ERP005899_liver | 273 .03 RPM |
| SRP030211_testis | 18 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000007657 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007164 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_1680 | 98.78 | 77.91 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000024240 retrocopies