Parental gene: | PPP2CA, ENSCAFG00000001010 |
| Aliases: | None |
| Description: | Canis lupus familiaris protein phosphatase 2, catalytic subunit, alpha isozyme (PPP2CA), mRNA. [Source:RefSeq mRNA;Acc:NM_001003063] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 11:22388326..22522050(-) |
>ENSCAFG00000001010
ATGGAGATGTATGAAACCCTCGGAAAAGTGGGAGAGGGAAGTTATGGAACAGTCATGAAGTGTAAACATAAGGATACTGG
GCAGATAGTGGCCATTAAGATATTTTACGAGAAACCGGAGAAATCTGTCAACAAAATTGCAACAAGAGAAATAAAGTTTT
TAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAGTTTTTAGACAGAAAAAGAAAATTCATTTGGTGTTTGAA
TTTATTGACCACACAATATTAGATGAGTTGCAACATTATTGTCATGGACTAGAGAGTAAACGACTTAGAAAATACCTCTT
CCAGATCCTTCGAGCAATTGAATATCTTCACAATAATAACATCATTCATCGAGATATAAAACCTGAGAATATTTTAGTAT
CCCAGTCAGGAATTACTAAGCTCTGTGATTTTGGTTTTGCACGAACTCTAGCAGCTCCTGGGGACATTTATACGGACTAT
GTGGCCACACGCTGGTATAGAGCTCCAGAATTAGTATTAAAAGATACTTCTTATGGAAAACCTGTAGATATCTGGGCTTT
GGGTTGTATGATCATTGAGATGGCCACTGGAAATCCCTATCTTCCTAGCAGTTCTGATTTGGATTTACTTCATAAAATTG
TTTTAAAAGTAGGCAATTTGACACCTCACTTACAGAATATCTTTTCTACGAGTCCCATTTTTGCTGGGGTGGTTCTTCCT
CAAGTTCAACACACCAAAAATGCAAGAAAAAAATACCCAAAACTAAATGGATTGTTGGCAGATATAGTTGACGCTTGTTT
ACAAATTGATCCTGCTGAGAGGACATCATCTACTGATCTTTTGCATCATGAGTACTTTACTAGAGATGGATTTATTGAAA
AATTCATACCAGAACTGAGAGCTAAGTTACTGCAAGAAGCAAAAGTCAATTCATTCATAAAGCCAAAAGAGAATTCTAAA
GAGAACGAGCTTATGAAAGATGAAAGAAAAACAACTTATACCAATACACTGCTAAGTACTCCAGTTTTGGGAAAGGAAAT
GGAGAGAGAGAAAAAACCCAAGGAGATCAAAGTCAGAGTTATTAAAGTCAAAGGAGGAAAAGGAGATATCTTAGAACCAA
ACAAGATAGAGTGTGAAGGTAGACATTGTCAACAGGATGCCGTTGAAAATGCTCATTCTATGTCTCAAGATACAAAACCT
GTAATCAGTGAACCACTACCAAGCCCTGTCAATCCCAGCACTAATTCTAATGGCATGAAAGATGATCCACATGCTGGAGG
TAGTATGATGATGCCACCCATCAATCTAACTAGCAGTAATTTGATGGCTTCAAATCCCAATTCAAATCTTTCCCATCCAA
ATTCAAGGTTGACTGAAAGAGCAAAAAAGAGACGTACCTCTTCACAATCTATTGGACAGGTTATGTCTAATTACAGGCAA
GAGGATGCAGGTCCCATTCAAAGCCAAATGGAGAAAAGTGTATTTAATGAGCGAACAGGTCAAAGTGACCAAATGGCAAA
TGGACACAAAAGAAAGCTGAATTTTTCCAGATCTGACAGGAAGGAATTCCATTTCCCAGAACTGCCTTTCACAATACAGC
CCAAGGAGGTGAAAGGAATGGAAGTTAAACAGATGAAAGTGCTGAAGAGGGAATCAAGGAAAACAGATTCATCTAAAATA
CCAACTTTACTTAATGTGGATCAAAATCAAGAAAAACAAGAGGGTGGAGATGGCCATTTTAAGGGGAAGAATTTGAAGAG
GAACAGATTTTTTTTCTGGTAG
ATGGAGATGTATGAAACCCTCGGAAAAGTGGGAGAGGGAAGTTATGGAACAGTCATGAAGTGTAAACATAAGGATACTGG
GCAGATAGTGGCCATTAAGATATTTTACGAGAAACCGGAGAAATCTGTCAACAAAATTGCAACAAGAGAAATAAAGTTTT
TAAAGCAATTTCGTCATGAAAACCTGGTCAATCTGATTGAAGTTTTTAGACAGAAAAAGAAAATTCATTTGGTGTTTGAA
TTTATTGACCACACAATATTAGATGAGTTGCAACATTATTGTCATGGACTAGAGAGTAAACGACTTAGAAAATACCTCTT
CCAGATCCTTCGAGCAATTGAATATCTTCACAATAATAACATCATTCATCGAGATATAAAACCTGAGAATATTTTAGTAT
CCCAGTCAGGAATTACTAAGCTCTGTGATTTTGGTTTTGCACGAACTCTAGCAGCTCCTGGGGACATTTATACGGACTAT
GTGGCCACACGCTGGTATAGAGCTCCAGAATTAGTATTAAAAGATACTTCTTATGGAAAACCTGTAGATATCTGGGCTTT
GGGTTGTATGATCATTGAGATGGCCACTGGAAATCCCTATCTTCCTAGCAGTTCTGATTTGGATTTACTTCATAAAATTG
TTTTAAAAGTAGGCAATTTGACACCTCACTTACAGAATATCTTTTCTACGAGTCCCATTTTTGCTGGGGTGGTTCTTCCT
CAAGTTCAACACACCAAAAATGCAAGAAAAAAATACCCAAAACTAAATGGATTGTTGGCAGATATAGTTGACGCTTGTTT
ACAAATTGATCCTGCTGAGAGGACATCATCTACTGATCTTTTGCATCATGAGTACTTTACTAGAGATGGATTTATTGAAA
AATTCATACCAGAACTGAGAGCTAAGTTACTGCAAGAAGCAAAAGTCAATTCATTCATAAAGCCAAAAGAGAATTCTAAA
GAGAACGAGCTTATGAAAGATGAAAGAAAAACAACTTATACCAATACACTGCTAAGTACTCCAGTTTTGGGAAAGGAAAT
GGAGAGAGAGAAAAAACCCAAGGAGATCAAAGTCAGAGTTATTAAAGTCAAAGGAGGAAAAGGAGATATCTTAGAACCAA
ACAAGATAGAGTGTGAAGGTAGACATTGTCAACAGGATGCCGTTGAAAATGCTCATTCTATGTCTCAAGATACAAAACCT
GTAATCAGTGAACCACTACCAAGCCCTGTCAATCCCAGCACTAATTCTAATGGCATGAAAGATGATCCACATGCTGGAGG
TAGTATGATGATGCCACCCATCAATCTAACTAGCAGTAATTTGATGGCTTCAAATCCCAATTCAAATCTTTCCCATCCAA
ATTCAAGGTTGACTGAAAGAGCAAAAAAGAGACGTACCTCTTCACAATCTATTGGACAGGTTATGTCTAATTACAGGCAA
GAGGATGCAGGTCCCATTCAAAGCCAAATGGAGAAAAGTGTATTTAATGAGCGAACAGGTCAAAGTGACCAAATGGCAAA
TGGACACAAAAGAAAGCTGAATTTTTCCAGATCTGACAGGAAGGAATTCCATTTCCCAGAACTGCCTTTCACAATACAGC
CCAAGGAGGTGAAAGGAATGGAAGTTAAACAGATGAAAGTGCTGAAGAGGGAATCAAGGAAAACAGATTCATCTAAAATA
CCAACTTTACTTAATGTGGATCAAAATCAAGAAAAACAAGAGGGTGGAGATGGCCATTTTAAGGGGAAGAATTTGAAGAG
GAACAGATTTTTTTTCTGGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 107 .74 RPM |
| SRP017611_kidney | 77 .33 RPM |
| SRP017611_liver | 27 .12 RPM |
| SRP012049_cerebellum | 106 .34 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Gadus morhua | ENSGMOG00000015957 | possible_ortholog | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_630 | 73.72 | 99.68 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000001010 retrocopies