Parental gene: | ERCC1, ENSCAFG00000004448 |
| Aliases: | None |
| Description: | excision repair cross-complementing rodent repair deficiency, complementation group 1 (includes overlapping antisense sequence) [Source:HGNC Symbol;Acc:3433] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 1:110130993..110147401(+) |
>ENSCAFG00000004448
AAGAACCCTGGGATGGACGGAGACGCAGTGCGGCCCCCCGCCGAGCCACCCACGAGGAAGAAATTCTTCATACCACTGGG
CGAGGATGAGGCCCCTCCTGTAGGGGTCAAGCCCTTATTCAAATCCACCCGGAGCCTGCCCACTGTGGAGACCTCGGTTC
AGGCAGCCCCTCAGACCTATGCAGAGTATGCCATCTCGGGACCTCCAGGACTGGCTGGAGCTCCACACCCCACCGGGCCA
GAACCCCTGACAGGAGAGACCCCCAATCAGGCCTCCAAACCAGGGGCGAAATCCAACAGCATCATTGTGAGCCCCCGCCA
GAGGGGCAACCCTGTGCTGAAGTTTGTGCGGAACGTGCCCTGGGAATTTGGTGACGTGCTTCCCGACTATGTGCTGGGCC
AGAGCACCTGTGCCCTGTTCCTCAGCCTCCGCTACCACAATCTCCACCCGGACTACATCCACGAGCGGCTGCAGAGCCTG
GGGAAGAGTTTTGCGCTGCGGGTCCTGCTGGTCCAGGTGGACGTGAAAGATCCTCAGCAGGCCCTCAAGGAGCTGGCTAA
GATGTGCATCCTGGCCGACTGCACCCTGGTCCTTGCCTGGAGCCCCGAGGAGGCCGGGCGGTACCTGGAGACTTACAAAG
CCTATGAGCAGAAGCCGGCCGACCTCCTGATGGAGAAGCTGGAGCAGGATTTCGTCTCCCGGGTGACTGAATGCCTGACC
ACCGTGAAGTCAGTCAATAAAACAGACAGCCAGACCCTCCTGACAACTTTTGGGTCTCTGGAACAGCTCATGGCTGCATC
GAGGGAAGATCTGGCTTTGTGTCCAGGCCTGGGGCCCCAGAAGGTAAGAGCTATGGGGATGGGCCTGCGGGGTTGGGGAC
AGGAGGGAGCTCCAAATAAATGGGACCTCGGATCCCAAAACTCTGAGGTTTTGGAAGGCCCACAAAGGCAGTGGGATGGC
TTCCTCCTC
AAGAACCCTGGGATGGACGGAGACGCAGTGCGGCCCCCCGCCGAGCCACCCACGAGGAAGAAATTCTTCATACCACTGGG
CGAGGATGAGGCCCCTCCTGTAGGGGTCAAGCCCTTATTCAAATCCACCCGGAGCCTGCCCACTGTGGAGACCTCGGTTC
AGGCAGCCCCTCAGACCTATGCAGAGTATGCCATCTCGGGACCTCCAGGACTGGCTGGAGCTCCACACCCCACCGGGCCA
GAACCCCTGACAGGAGAGACCCCCAATCAGGCCTCCAAACCAGGGGCGAAATCCAACAGCATCATTGTGAGCCCCCGCCA
GAGGGGCAACCCTGTGCTGAAGTTTGTGCGGAACGTGCCCTGGGAATTTGGTGACGTGCTTCCCGACTATGTGCTGGGCC
AGAGCACCTGTGCCCTGTTCCTCAGCCTCCGCTACCACAATCTCCACCCGGACTACATCCACGAGCGGCTGCAGAGCCTG
GGGAAGAGTTTTGCGCTGCGGGTCCTGCTGGTCCAGGTGGACGTGAAAGATCCTCAGCAGGCCCTCAAGGAGCTGGCTAA
GATGTGCATCCTGGCCGACTGCACCCTGGTCCTTGCCTGGAGCCCCGAGGAGGCCGGGCGGTACCTGGAGACTTACAAAG
CCTATGAGCAGAAGCCGGCCGACCTCCTGATGGAGAAGCTGGAGCAGGATTTCGTCTCCCGGGTGACTGAATGCCTGACC
ACCGTGAAGTCAGTCAATAAAACAGACAGCCAGACCCTCCTGACAACTTTTGGGTCTCTGGAACAGCTCATGGCTGCATC
GAGGGAAGATCTGGCTTTGTGTCCAGGCCTGGGGCCCCAGAAGGTAAGAGCTATGGGGATGGGCCTGCGGGGTTGGGGAC
AGGAGGGAGCTCCAAATAAATGGGACCTCGGATCCCAAAACTCTGAGGTTTTGGAAGGCCCACAAAGGCAGTGGGATGGC
TTCCTCCTC
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 11 .04 RPM |
| SRP017611_kidney | 16 .18 RPM |
| SRP017611_liver | 6 .74 RPM |
| SRP012049_cerebellum | 12 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000014643 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_776 | 97.71 | 54.18 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000004448 retrocopies