Parental gene:

AKR1A1, ENSCAFG00000004549

Aliases:None
Description:Canis lupus familiaris aldo-keto reductase family 1, member A1 (aldehyde reductase) (AKR1A1), mRNA. [Source:RefSeq mRNA;Acc:NM_001252168]
Organism:Dog (Canis familiaris)
Coordinates:15:14792397..14808592(-)


>ENSCAFG00000004549
ATGGCGGCTTCATGTGTCCTCCTGCACACTGGGCAGAAGATGCCCCTGATTGGGCTGGGCACCTGGAAGAGTGATCCTGG
CCAGGTAAAAGCAGCTATTATGTATGCCCTGAGTGTAGGCTACCGCCACATTGACTGTGCTGCTATCTACGGCAATGAGG
CTGAGATCGGGGAGGCCCTGAAGGAGAATGTAGGACCTGGCAAGGTGGTGCTTCGAGAGGAGCTGTTTGTGACTTCTAAG
CTGTGGAACACTAAACACCACCCCAAGGATGTGGAGCCTGCCCTCCGGAAGACACTGGCTGACCTCCAGCTGGAGTATTT
GGACCTGTACCTGATGCACTGGCCTTATGCCTTTGAGCGGGGAGACAACCCTTTCCCTAAAAATGCCGATGGGACAATCC
GCTATGACTCTACCCACTACAAGGAGACCTGGAAAGCTCTGGAGGCACTGGTGGCTAAGGGACTGGTACGAGCACTGGGC
CTGTCCAATTTCAGCAGTCGGCAGATCGATGATGTGCTCAGTGTGGCCTCTGTACGCCCAGCTGTCCTGCAGGTGGAATG
TCACCCATACTTGGCTCAGAAGGAGCTGATTGCTCATTGCCAAGCACGTGGCCTGGAGGTGACCGCTTATAGCCCTCTGG
GATCCTCTGATAGAGCTTGGCGTGATCCTGATGAGCCTGTCCTACTTGAGGAGCCGGTAGTCTTGGCACTGGCTGAAAAG
TATGGCCGGTCTCCAGCTCAGATCCTGCTCAGGTGGCAGGTCCAGCGGAAAGTGATCTGCATCCCCAAGAGTATCACACC
TTCACGTATTCTCCAGAACATCCAGGTGTTTGACTTCACCTTTAGCCCAGACGAGATGAAGCAGCTAGATGCCCTGAATA
AAAATTGGCGATACATTGTGCCCATGCTCACAGTGGATGGGAAGAGGGTCCCGAGAGATGCAGGGCATCCTCTGTACCCC
TTTAATGATCCATACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 28 .18 RPM
SRP017611_brain 19 .93 RPM
SRP017611_kidney 305 .42 RPM
SRP017611_liver 34 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001290 within_species_paralog 1 retrogene
retro_cfam_63,
Callithrix jacchus ENSCJAG00000013633 ortholog_one2one 2 retrogenes
retro_cjac_3093, retro_cjac_3334,
Echinops telfairi ENSETEG00000006450 ortholog_one2one 1 retrogene
retro_etel_1106,
Macropus eugenii ENSMEUG00000007370 ortholog_one2many 1 retrogene
retro_meug_1,
Otolemur garnettii ENSOGAG00000007175 ortholog_one2one 2 retrogenes
retro_ogar_1522, retro_ogar_2582,
Tarsius syrichta ENSTSYG00000005301 ortholog_one2one 1 retrogene
retro_tsyr_1409,
Tursiops truncatus ENSTTRG00000012180 ortholog_one2one 1 retrogene
retro_ttru_751,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_558 99.38 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCAFG00000004549 retrocopies