Parental gene:

NIPSNAP1, ENSCAFG00000012291

Aliases:None
Description:nipsnap homolog 1 (C. elegans) [Source:HGNC Symbol;Acc:7827]
Organism:Dog (Canis familiaris)
Coordinates:26:22786990..22800195(-)


>ENSCAFG00000012291
ATGGCTCCGCGGCTGTGCAGCATCTCTGCGGCGGCGCGGCGGCTGCTGGGGAGCCCGAAGCCCCGCGCCGGGGATGTCGC
GGCTGCTGCGCGCTTGAGAATCTTCTATTCCAAGGACAATGAAGGGAGCTGGTTCCGCTCCCTCTTTGTGCACAAGGTGG
ATCCCCGGAAGGATGCCCACTCCACCCTGCTATCCAAGAAGGAAACCAGCAACCTCTACAAGATCCAGTTTCACAATGTG
AAGCCTGAATGTCTGGATGCCTACAACAGCCTGACGGAGGCTGTGCTGCCCAAGCTGCACCTGGATGAGGACTACCCCTG
CTCGCTCGTGGGCAACTGGAACACATGGTACGGGGAGCAGGACCAGGCAGTACACCTGTGGCGATTCTCAGGTGGCTATC
CAGCCCTCATGGACTGCATGAATAAGCTCAAAAGCAACAAGGAGTACCTGGAGTTCCGAAAGGAGCGGAGCCAGATGCTA
CTGTCGAGGAGAAACCAGATGCTTCTTGAGTTCAGCTTCTGGAATGAGCCACAGCCCAGAGCAGGCCCCAACATCTATGA
GCTGAGGACATACAAGCTCAAGCCAGGAACCATGATTGAGTGGGGAAACAACTGGGCTCGGGCAATCAAGTACCGGCAAG
AGAACCAGGAGGCAGTAGGTGGCTTCTTCTCGCAGATTGGAGAGCTCTACGTTGTACACCATCTCTGGGCCTATAAAGAC
CTGCAATCTCGGGAAGAGACTCGAAATGCTGCTTGGAGAAAGAGAGGCTGGGACGAAAATGTCTACTACACAGTCCCATT
GGTGCGACACATGGAGTCTCGGATCATGATCCCGTTGAAGATCTCGCCTCTCCAGTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 35 .11 RPM
SRP017611_brain 36 .20 RPM
SRP017611_kidney 91 .73 RPM
SRP017611_liver 81 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Otolemur garnettii ENSOGAG00000012167 ortholog_one2one 1 retrogene
retro_ogar_2741,
Pteropus vampyrus ENSPVAG00000017876 ortholog_one2one 1 retrogene
retro_pvam_675,
Sus scrofa ENSSSCG00000009988 ortholog_one2one 1 retrogene
retro_sscr_615,
Tupaia belangeri ENSTBEG00000004614 ortholog_one2one 3 retrogenes
retro_tbel_247, retro_tbel_4673, retro_tbel_968,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_2091 92.63 100.00
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Download FASTA sequences of all ENSCAFG00000012291 retrocopies