Parental gene:

ENSCAFG00000015719

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:18:53992482..53995320(+)


>ENSCAFG00000015719
CCTCCCGGGGGGAAGATCAACCGGCCCCGAACGGAGCTGAAGAAGAAGCTGTTCAAGCGCCGGCGGGTGTTGAACCGGGA
GAGGCGACTGAAGCATCGGGTAGTCGGGGCTGTGATAGACGAAGGGCTGATCACGCGGCACCACTTGAAGAAGCGGGCGT
CCAGTGCACGTGCCAACATTACTCTGTCTGGGAAGAAGCGCAGAAAGCTCCTCCAGCAGATCCGGCTGGCCCAGAAAGAG
AAAGCAGCCATGGAAGTGGAAGCCCCAACAAGGCCAGTCAGGACTAGTGGACCACAGCCCAAACGGCAAAAGAAGACAAA
AGCACCCCAGGATATAGACATGGAGGACCTTGGAGATGAGAGGGGAATCTCTCAC

Library Parental gene expression (RPM)
SRP012049_cerebellum 18 .94 RPM
SRP017611_brain 13 .26 RPM
SRP017611_kidney 14 .66 RPM
SRP017611_liver 5 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006512 ortholog_one2one 1 retrogene
retro_amel_1386,
Bos taurus ENSBTAG00000010465 ortholog_one2one 2 retrogenes
retro_btau_1195, retro_btau_1799,
Felis catus ENSFCAG00000025454 ortholog_one2one 2 retrogenes
retro_fcat_1722, retro_fcat_773,
Macaca mulatta ENSMMUG00000013949 ortholog_one2one 4 retrogenes
retro_mmul_1186, retro_mmul_1541, retro_mmul_1785, retro_mmul_1981,
Mus musculus ENSMUSG00000071653 ortholog_one2one 2 retrogenes
retro_mmus_1809, retro_mmus_759,
Otolemur garnettii ENSOGAG00000033103 ortholog_one2one 1 retrogene
retro_ogar_811,
Rattus norvegicus ENSRNOG00000019701 ortholog_one2one 4 retrogenes
retro_rnor_1066, retro_rnor_1955, retro_rnor_851, retro_rnor_883,
Sus scrofa ENSSSCG00000023323 ortholog_one2one 2 retrogenes
retro_sscr_1162, retro_sscr_1163,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_757 84.78 73.60
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2. retro_cfam_1104 94.40 100.00
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Download FASTA sequences of all ENSCAFG00000015719 retrocopies