Parental gene: | ENSCAFG00000020158 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:56568484..56644306(-) |
>ENSCAFG00000020158
ATGGCTGACTCCGGCGGGCCGCGCTCGCCCGGCCTCAAGGCTCGGACGCCCCGCGCTTCCCGAAACGCCTCAGGTGCTAA
ACAGACAAATGCCTTAAAACAAGAAGATGCTTCTAAAAGTATCAGGCAGGTAGTGGCTGTCATTAAGAAAGAGAAAGAAA
GAAAAAGAAAGAGAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGTTGTTTGTATTTGGGAAG
TTCATCACACCTGCTCACTACAGCGATGTCGTGGATGAGCGTTCTATTATCAAACTCTGCGGTTATCCTTTATGTCAGAA
GAAACTAGGAATTGTACCAAAACAGAAATATAAAATTTCTACCAAAACCAATAAAGTCTATGATATTACTGAAAGAAAGT
GCTTTTGCAGCAACTTTTGTTACAAAGCATCTAAGTTTTTTGAAGCACAAATTCCTAAAACTCCAGTATGGGTTCGAGAA
GAGGAAAGGCATCCTGATTTTCAGTTACTACAGGAAGGACAAAGTGGCCATTCTGGAAAGGAAGTACAGCTATGCACTAA
GGCCATTAAAACATCAGATATTGACAATCCTGGCCATTTTGAGAAGCATTATGAATCTGGTTCTTCCAGCTCTCATAGTG
ATAATAACAGTGATAATGAACAAGACTTTGTTTCCTCCATTCTACCAGGAAACAGACCAACTGCAACGGGTATAAGTCCA
CAGCTGCACAAAAAAAGCATAATGAAAAAGAAAGCTGGTCAGAAAGCTAACTCCAAACATGAAGACAAAGAAGAGACGGT
AATAGATGTCACTGAGCAGCTAGGCAAGTGCAGATTAGATAGTCATGGGAAGGCTGCTGCTTGTGAACTTCCTTTACAGA
AAGTAAGTCCTCAGATTTCTTCAAATAGTCCTTTGCAAGAAAAATTAGAAGCTACAGAAAATTCTGAAAATAAATACAGT
AGTTCAAAAATAACTCTAGTAGGCATAAGTAAGAAAAGTGCTGAGCATTTTAAGAGAAAATTTGCCAAATCAAAGCAAGA
TTCTAGGCCAGCCTCTAGTTCAGTGCAGATGTGTCCTGAAGTTGCAAAGGCAAACTTACTTAAAGTCCTGAAGGAGACTT
TGATTGAGTGGAAGACAGAAGAAACTTTGAGGTTTTTGTATGGCCAGAATTATGCTGCTTTGTGTCTGAAACTTTCTTCA
GCCCCTCTGGTTAAAGAAGAAGAACTTGATGAAGATGACATACACTCTGACCTAGATAGGCATTTCCCTGCCTTTCAGGA
ATCTCAGAACAGCTTGGATGAGTCTTTACCTTTTAGGGCCTCAGATACAGCCATTAAACCACTGCCAAGTTATGAGAACT
TGAAAAAAGAAACTGAAACATTAAATCTGAGGATAAGGGAGTTTTATAGAGGACGATATGTTTTGAGTGAAGAAACCATC
AAATCACAAGACTCAGAAGAGCATGATCCCACCTTTCCACTGATAGATTCAAGTTCTCAGAACCAGATTAGAAAACGCAT
CGTACTGGAAAAGTTGAGTAAAGTAGTGCCTGGACTTTTGGGGCCTCTTCAAATCACATTAGGAGATATTTATACACAAC
TTAAAAATCTCGTCCGAACTTTCAGATTAACAAATAGAAATATTATACACAAACCTGTGGAGTGGACCTTAATTGCTATG
GTGTTGCTGTCATTACTGACCCCAATTCTTGGCATTCAGAAGCATTCTCGGGAAAATGTGGTGTTTACACAGTTTATAGA
GACTTTGCTTGAAGAATTACACTTAAAGAATGAAGACCTTGAAAGCTTAACTGTCATATTTAAAACCAGCTGTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012049_cerebellum | 1 .60 RPM |
| SRP017611_brain | 1 .91 RPM |
| SRP017611_kidney | 1 .45 RPM |
| SRP017611_liver | 0 .29 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Myotis lucifugus | ENSMLUG00000001016 | ortholog_many2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000001009 | ortholog_many2many | 1 retrogene | |
| Taeniopygia guttata | ENSTGUG00000006076 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_106 | 94.60 | 100.00 | Please wait, loading  |
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Download FASTA sequences of all ENSCAFG00000020158 retrocopies