Parental gene:

ENSCAFG00000020317

Aliases:LOC479974, SAMD1, SAMD13
Description:None
Organism:Dog (Canis familiaris)
Coordinates:6:63527968..63563682(-)


>ENSCAFG00000020317
ATGGTGAATTACTACAAAGTACTAGGAGTGCCTCAAAACGCTTCCCCCTCTGATATCAAGAAGGCTTACCATCAGTTAGC
TCTTCGGGTACATCCAGACAAGAACCCAAAAAACAGGGAGGCAGCTGAGGAGAAATTCAAACAAGTAACAGAAGCCTACG
AGGTGTTGTCTGATGCTGAGAAACGTAACAACTATGACAAGTCCGGAGGGAACCGCATCAAAACAGAAAATACAGGCGAC
TGCAGAGACGAAAAGTGCTTGAAAGAGGAACCACGGTTTGAGAGGCCACACTGCGGCTTTCAAGATGTCTTTGAAGACAA
AGACCTCTTCTCAGGCAGTTATTTTCCCACTGGTCATGTGGGTAAGGCCAGGAGATTTCACTCCTCCTTCTTTGATGTGA
TCCCCATATTGGACACAGGATTTTCCACGTTTGTTTCCCCAGGCTCCAGACCAAGTCCCCCTTCCTCTGGGACATTTGTT
CCCTTCGTAAGCCGTGGAATGGGAAACTTCAGACTGGTCACCACGTGTAGCCAGATAGTGAATGGCAAGAGAGTTGTGAC
AAAGAAAGTTCTAGAAAATGTGACAGGGAAGACTGGACTGGAAAAAGACAGCCTATTTCATCAGATGCCTCCAGGTCATC
GGAAATTGATGGAAAATCCCTGCTATTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 2 .35 RPM
SRP017611_brain 1 .27 RPM
SRP017611_kidney 0 .33 RPM
SRP017611_liver 0 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005174 within_species_paralog 6 retrogenes
retro_cfam_155, retro_cfam_201, retro_cfam_2085, retro_cfam_2131, retro_cfam_527, retro_cfam_8,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_809 69.31 98.04
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Download FASTA sequences of all ENSCAFG00000020317 retrocopies