Parental gene: | APOPT1, ENSCAFG00000030884 |
| Aliases: | None |
| Description: | apoptogenic 1, mitochondrial [Source:HGNC Symbol;Acc:20492] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 8:71325508..71362025(+) |
>ENSCAFG00000030884
ATGAGACCCAGAGGGAGAGGCAGAGACACAGGCAGAGGGAGAAGCAGGCTCCATGCAGGGAGCCCGACGCGGGATCGATC
CCAGGTCTCCAGGTCACGCCCCGGGCTGAAGGTCTCAGGATTCTGCCCTCCGAGAAAATCTTGCCGTGACTGGATAGGAC
CCCCAGATAAACATTCAAACCTTCGACCCATTCACTTTTACATCCCGGAAAGCGAGTCACCGTTGGAACAAAAGCTAAGA
CAATTAAGACAAGAAACACAAGAATGGAACCAACAGTTCTGGGCAAACCAGAATTTGACATTTCGAAAGGAAAAAGAAGA
ATTTATTCACTCAAGACTAAAAGCTAAAGGCTTGGAACTGAGATCTGGATCAGGTCAAAAAGCAACATTAGATGCAGAAG
AAATGGCTGACTTTTACAAGGAATTTTTAAGTAAAAATTTTCAGAAGCACATGTATTATAACAGAGACTGGTACAAGCGT
AATTTTGCCATTACCTTCTTCATGGGAAAAGTGGCCCTGGAGAGAGTTTGGAACAAGCTTAGACCGAAGCATAAGAAGAG
CAGCACCTAG
ATGAGACCCAGAGGGAGAGGCAGAGACACAGGCAGAGGGAGAAGCAGGCTCCATGCAGGGAGCCCGACGCGGGATCGATC
CCAGGTCTCCAGGTCACGCCCCGGGCTGAAGGTCTCAGGATTCTGCCCTCCGAGAAAATCTTGCCGTGACTGGATAGGAC
CCCCAGATAAACATTCAAACCTTCGACCCATTCACTTTTACATCCCGGAAAGCGAGTCACCGTTGGAACAAAAGCTAAGA
CAATTAAGACAAGAAACACAAGAATGGAACCAACAGTTCTGGGCAAACCAGAATTTGACATTTCGAAAGGAAAAAGAAGA
ATTTATTCACTCAAGACTAAAAGCTAAAGGCTTGGAACTGAGATCTGGATCAGGTCAAAAAGCAACATTAGATGCAGAAG
AAATGGCTGACTTTTACAAGGAATTTTTAAGTAAAAATTTTCAGAAGCACATGTATTATAACAGAGACTGGTACAAGCGT
AATTTTGCCATTACCTTCTTCATGGGAAAAGTGGCCCTGGAGAGAGTTTGGAACAAGCTTAGACCGAAGCATAAGAAGAG
CAGCACCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 16 .20 RPM |
| SRP017611_kidney | 26 .41 RPM |
| SRP017611_liver | 9 .35 RPM |
| SRP012049_cerebellum | 20 .92 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000019553 | ortholog_one2one | 5 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000011728 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000027939 | ortholog_one2one | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000009792 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002350 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015416 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_396 | 74.19 | 80.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1514 | 63.37 | 53.44 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000030884 retrocopies