Parental gene: | ENSCJAG00000000157 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 7:40645418..40766764(-) |
>ENSCJAG00000000157
ATGAAGCTGCTTGCCAGGGCTCTCCGTCTCTGTGGATTTGTAAGGCACAAATCCTCCAGGAGGCTGGTAGCTGGCCAGGG
ATGTGTGGGGCCCCAGAGAGGGTGCTGCACTCCCATCCAGGCGGCCGGACCCAGGGCTGATCTCCCACCCTCTGGAGCCT
ACACTACTGCCAGGATCATGCGGCCAGATGACGCCAATGTGGCCGGCAATGTCCATGGGGGGACCATCCTGAAGATGATC
GAGGAGGCGGGTGCCATCATCAGCACCCGGCATTGCAACAGCCAGAACGGGGAGCGCTGTGTGGCTGCGCTGGCTCGGGT
TGAGCGCACCGACTTCCTGTCGCCCATGTGCATCGGGGAGGTGGCCCACGTCAGCGCGGAGATCACCTATACCTCTAAGC
ACTCGGTGGAGGTACAGGTCAACGTGTTGTCTGAAAACATCCTCACAGGTGCCAAAAAGCTGACCAATAACGCCACCCTC
TGGTATGTGCCCTCGCTGAAGAATGTGGACAACAAGGTCCTTGAGGTGCCTCCTGTTGTGTTTTGCCGCCACTCTCAGCA
ACGGTCAGGACCTGCCTCAAAGCCCGCCTCCTGCCTGTCTAGGTTTGGGACACCTTGGCATGAGGGCGACGCAGGGCAGG
GGATCTTGCTTCCAGAGCCGAACACTGTCAGCTACAGCCAGTCCAGCTTGATTCACCTGGTGGGGCCTTCAGACTGTACC
CTACACGGCTTCGTCCATGGAGGCGTGACCATGAAGCTCATGGACGAGGTCGCCGGGATCGTGGCTGCACGCCACTGCAA
GACCAACATCGTCACAGCTTCCGTGGACGCCATTAATTTTCACGACAAGATCAGAAAAGGCTTCGTCATCACCATCTCAG
GACGAATGACCTTCACGAGCAATAAGTCCATGGAGATCGAGGTCTTGGTGGACGCCGACCCTGTTGTGGACAGCTCGCAG
AAGCGCTACCGGGCCGCCAGTGCCTTCTTCACCTACGTGTCGCTGAGTCAGGAGGGCAGGTCGCTGCCCGTGCCCCAGCT
TGTGCCCGAGACCGAGGACGAGAAGAAGCGCTTTGAGGAAGGCAAAGGGCGGTACCTGCAGATGAAGGCGAAACGACAGG
GCCACGTGGAGCCCCAGCCCTAG
ATGAAGCTGCTTGCCAGGGCTCTCCGTCTCTGTGGATTTGTAAGGCACAAATCCTCCAGGAGGCTGGTAGCTGGCCAGGG
ATGTGTGGGGCCCCAGAGAGGGTGCTGCACTCCCATCCAGGCGGCCGGACCCAGGGCTGATCTCCCACCCTCTGGAGCCT
ACACTACTGCCAGGATCATGCGGCCAGATGACGCCAATGTGGCCGGCAATGTCCATGGGGGGACCATCCTGAAGATGATC
GAGGAGGCGGGTGCCATCATCAGCACCCGGCATTGCAACAGCCAGAACGGGGAGCGCTGTGTGGCTGCGCTGGCTCGGGT
TGAGCGCACCGACTTCCTGTCGCCCATGTGCATCGGGGAGGTGGCCCACGTCAGCGCGGAGATCACCTATACCTCTAAGC
ACTCGGTGGAGGTACAGGTCAACGTGTTGTCTGAAAACATCCTCACAGGTGCCAAAAAGCTGACCAATAACGCCACCCTC
TGGTATGTGCCCTCGCTGAAGAATGTGGACAACAAGGTCCTTGAGGTGCCTCCTGTTGTGTTTTGCCGCCACTCTCAGCA
ACGGTCAGGACCTGCCTCAAAGCCCGCCTCCTGCCTGTCTAGGTTTGGGACACCTTGGCATGAGGGCGACGCAGGGCAGG
GGATCTTGCTTCCAGAGCCGAACACTGTCAGCTACAGCCAGTCCAGCTTGATTCACCTGGTGGGGCCTTCAGACTGTACC
CTACACGGCTTCGTCCATGGAGGCGTGACCATGAAGCTCATGGACGAGGTCGCCGGGATCGTGGCTGCACGCCACTGCAA
GACCAACATCGTCACAGCTTCCGTGGACGCCATTAATTTTCACGACAAGATCAGAAAAGGCTTCGTCATCACCATCTCAG
GACGAATGACCTTCACGAGCAATAAGTCCATGGAGATCGAGGTCTTGGTGGACGCCGACCCTGTTGTGGACAGCTCGCAG
AAGCGCTACCGGGCCGCCAGTGCCTTCTTCACCTACGTGTCGCTGAGTCAGGAGGGCAGGTCGCTGCCCGTGCCCCAGCT
TGTGCCCGAGACCGAGGACGAGAAGAAGCGCTTTGAGGAAGGCAAAGGGCGGTACCTGCAGATGAAGGCGAAACGACAGG
GCCACGTGGAGCCCCAGCCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 6 .26 RPM |
| SRP051959_skeletal_muscle | 4 .65 RPM |
| SRP051959_lymph_node | 5 .37 RPM |
| SRP051959_lung | 4 .93 RPM |
| SRP051959_liver | 12 .48 RPM |
| SRP051959_kidney | 14 .84 RPM |
| SRP051959_heart | 6 .26 RPM |
| SRP051959_colon | 28 .93 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000097021 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000006882 | ortholog_many2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010371 | possible_ortholog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001945 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000084 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_457 | 86.80 | 89.21 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_1229 | 76.81 | 68.16 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000157 retrocopies