Parental gene: | SCLY, ENSCJAG00000000471 |
| Aliases: | None |
| Description: | selenocysteine lyase [Source:HGNC Symbol;Acc:18161] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:154575798..154619501(+) |
>ENSCJAG00000000471
AGCAGGAGCGCCTGCCTGGGCGGGAGAGATGCGTCGGCGAGCACGGCGAGTCAGCCTAGCGGCTGTGGAAAACACAACTC
GCCGGAGAGGAAGGTTTATATGGACTATAATGCAACCACTCCCCTGGAGCCAGAAGTCATCCAGGCTGTGACCGAGGCCA
TGTGGGAAGCCTGGGGAAATCCCAGCAGTCCTTATCCAGCAGGGAGAAAGGCCAAAGATATTATAAAAGCAGCTCGGGAG
AGCCTTGCGAAGATGATTGGTGGGAAACCTCAAGACATCATCTTCACTTCCGGGGGCACTGAGTCAAATAATTTAGTAAT
CCATTCTGTGGTGAAACATTTCTACGTAAACCAGACGTCGAAGGGAGACACGGGTGTGCACCACAGCCCAGTAGACGGGG
CCAAGCCCCATTTCATCACTTCCTCTGTGGAACACGACTCCATTCGACTACCCCTGGAGCACCTGGCAGAAGAGCAAGCT
GCGGCGGTCACCTTTGTCCCGGTGTCCAAGGCGAGCGGGCAGGCAGAGGTGGATGACATCCTTGCAGCCGTCCGCCCCAC
CACACGCCTCGTGAGCATCATGCTGGCCAACAATGAGACCGGCGTCGTCATGCCCGTCCCTGAAATCAGCCAGCGCATTA
AAGCCCTGAACCAGGAACGGGCAGCAGCTGGGCTGCCTCCCATCCTTGTGCACACGGATGCCGCACAGGCCTTGGGGAAG
CGGCGCGTGGATGTGGAGGACCTGGGCGTGGACTTCCTTACAATTGTGGGGCACAAGTTTTATGGTCCCAGGATTGGTGC
ACTTTATGTACGAGGACTTGGTGAATGTACCCTTCTCCACCCTATGCTGTTTGGAGGTGGACAAGAACAGAATTTCAGGC
CAGGGACAGAGAACACCCCAATGATTGCTGGCCTTGGGAAGTCTGTCTCTTCTGCCACGAGAAACAGTGGTACCGTTACC
ACAGCAGAGGTGAAGTGTCAGCCTCTGCTCAAAGCCCACTTTCTTCAAGCAGCCCTCCATGAATCACAAAAGCTGTCAGG
GAAGAAGGAATTACTGAATGTAGACATGTGTCTTATTTCTGGTACTCACTGGCAGAGACGCATGGTGCTTGCACAATGCC
GAGTGCTGATGGCCAGTGTGGGGGCCGCGTGCCACTCGGACCACGGGGACCAGTAA
AGCAGGAGCGCCTGCCTGGGCGGGAGAGATGCGTCGGCGAGCACGGCGAGTCAGCCTAGCGGCTGTGGAAAACACAACTC
GCCGGAGAGGAAGGTTTATATGGACTATAATGCAACCACTCCCCTGGAGCCAGAAGTCATCCAGGCTGTGACCGAGGCCA
TGTGGGAAGCCTGGGGAAATCCCAGCAGTCCTTATCCAGCAGGGAGAAAGGCCAAAGATATTATAAAAGCAGCTCGGGAG
AGCCTTGCGAAGATGATTGGTGGGAAACCTCAAGACATCATCTTCACTTCCGGGGGCACTGAGTCAAATAATTTAGTAAT
CCATTCTGTGGTGAAACATTTCTACGTAAACCAGACGTCGAAGGGAGACACGGGTGTGCACCACAGCCCAGTAGACGGGG
CCAAGCCCCATTTCATCACTTCCTCTGTGGAACACGACTCCATTCGACTACCCCTGGAGCACCTGGCAGAAGAGCAAGCT
GCGGCGGTCACCTTTGTCCCGGTGTCCAAGGCGAGCGGGCAGGCAGAGGTGGATGACATCCTTGCAGCCGTCCGCCCCAC
CACACGCCTCGTGAGCATCATGCTGGCCAACAATGAGACCGGCGTCGTCATGCCCGTCCCTGAAATCAGCCAGCGCATTA
AAGCCCTGAACCAGGAACGGGCAGCAGCTGGGCTGCCTCCCATCCTTGTGCACACGGATGCCGCACAGGCCTTGGGGAAG
CGGCGCGTGGATGTGGAGGACCTGGGCGTGGACTTCCTTACAATTGTGGGGCACAAGTTTTATGGTCCCAGGATTGGTGC
ACTTTATGTACGAGGACTTGGTGAATGTACCCTTCTCCACCCTATGCTGTTTGGAGGTGGACAAGAACAGAATTTCAGGC
CAGGGACAGAGAACACCCCAATGATTGCTGGCCTTGGGAAGTCTGTCTCTTCTGCCACGAGAAACAGTGGTACCGTTACC
ACAGCAGAGGTGAAGTGTCAGCCTCTGCTCAAAGCCCACTTTCTTCAAGCAGCCCTCCATGAATCACAAAAGCTGTCAGG
GAAGAAGGAATTACTGAATGTAGACATGTGTCTTATTTCTGGTACTCACTGGCAGAGACGCATGGTGCTTGCACAATGCC
GAGTGCTGATGGCCAGTGTGGGGGCCGCGTGCCACTCGGACCACGGGGACCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .18 RPM |
| SRP051959_skeletal_muscle | 3 .19 RPM |
| SRP051959_lymph_node | 6 .10 RPM |
| SRP051959_lung | 3 .92 RPM |
| SRP051959_liver | 10 .83 RPM |
| SRP051959_kidney | 12 .56 RPM |
| SRP051959_heart | 3 .72 RPM |
| SRP051959_colon | 3 .13 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000013824 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002777 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002756 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3989 | 95.63 | 71.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000471 retrocopies