Parental gene: | SRBD1, ENSCJAG00000000727 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 14:62298873..62543444(+) |
>ENSCJAG00000000727
ATGTCATCACTGCCAAGAAGAGCAAAAGTACAGGTCCAGGGTGTGGTATCAAAAGATGAATTTTCTTCAGTCTCTGAGTT
ATCATCTGCCTCTGAAGAAGATGACAAGGAAGATAGTTCCTGGGAGCCCCAAAAGAAAGCTTCCAGAAGCCGTAAACAGC
TCGTTCCCAAGGAATCCAAACCAAAGAGGATGCCTCGGGTGAAGAAGAATACCCCACAGATCAGTGATGACTCAGAAGTT
GTTGTTAAGGAGGAGCTGAATAGCTCTGTGGCTGCTGCTGATACTGCTTTGGAAGACAGAAAAAATAAATTGGATACTGT
AGAGACTCCAAAAACAGCCAAGACAAAACGGAAATGTTCAGCGCAGCCACATTCAGCTCAGAGGACCAAAAAGCTGAAAG
TTGATGAAGAAACCAGCAAAGCCACCAACTTAGAGGGTGAGAGTAATAGTTCAGAGACACCATCCACAAGCACTATATGC
AGAGGTACCTGCAAGAAGGAAGAGAATGAAGATGACTTTACATTTGGTCAGTCTCCTTTAAAGAAAATGAAGACTGAAAC
ATGTCCTCAGGGACAGCCTGTCAAGTTTCCAGCAAATGCCAATAATACTAAAGAGGAGGTGGAAATGAATTGGGACATAG
TACAGGTTTTATCTGAAAGAACTAATGTTGAACCTTGGGTTTGTGCCAACGCCATTCGTCTCTTTAATGATGACAACACA
ATTCCCTTCATTATACGTTATCGAAAAGAGCTCATTAATAACCTTGATGCTGATTCCTTGAGAGAAGTTCAACAAACCCT
AGAAGAACTACGGGCCGTTGTAAAGAAAGTTCATAATACAATCCAGAAAATTAAGAAGGAAGGGAAGATGTCTGAGTGCT
TGTTAAAAGCCTTGCTGAATTGTAAAACATTTGAAGAACTAGAACATGTGTCTGCTCCATATAAAACTGGGAGCAAAGGG
ACCAAAGCCCAGAGAGCAAGACAGTTGGGCTTAGAAGGAGCAGCCAGGACACTGCTTGAGAAACCAGGGGAGCTTAATCT
GCTATCATACATTAGGCCTGATGTTAAAGGGCTTTCAACGCTCCGGGATATTGAAACAGGAGTGCAGCATATTTTAGCAG
ACATGATTGCTAAAGACAAAGACACACTTGACTTCATTCGGAACTTGTGCCAGAACAGACATGTTTCTATCCAGTCGTCT
CTGGCAAAAGTGTCCTCAAAAAAGGTAAATGAGAAAGATGTTGATAAGTTTCTGCTGTACCAGCATTTTTCATGCAACAT
AAGAACCATTCACCATCATCAGATTCTTGCAATTAACCGTGGGGAAAATTTGAAGATACTGACGGTTAAGGTCGATATTT
CTGATGGAGTGAAGAATGAATTCTGTAGGTGGTGCATCCAAAACAGATGGAGACCACGTAGCTTTGCAAGGCCAGAGGTA
ATGAAGATCTTACATAATTCACTAGATGATTCCTTTAAACGCCTTATTTATCCTCTCCTCTGTAGAGAATTCAGAGCCAA
ACTAACATCAGATGCAGAGAAGGAATCAGTAATGATGTTTGGACGGAATCTTCGTCAGCTCCTTTTAACAAGCCCTGTTC
CAGGGCGCACCTTAATGGGAGTGGATCCTGGTTATAAACATGGTTGCAAATTAGCTATAATTTCTCCTACCAGTCAGATA
CTTCATACTGATGTGGTTTACCTGCATTGTGGACAAGGCTTCCGAGAGGCAGAGAAAATAAAGAGGCTTTTGCTGAATTT
CAACTGCAGCACAGTAGTGATTGGAAATGGAACTGCCTGCCGGGAGACAGAAGCTTACTTTGCTGACCTGATAATGAAAA
ATTATTTTGCACCACTGGATGTTGTTTACTGTATCGTCAGTGAAGCAGGAGCATCAATCTACAGTGTCAGCCCTGAAGCT
AGCAAAGAGATGCCAGGGCTGGACCCTAACTTAAGAAGTGCAGTTTCCATAGCAAGGCGTGTACAAGATCCATTAGCTGA
GCTAGTGAAAATTGAGCCAAAGCACATTGGAGTTGGAATGTATCAGCATGATGTATCCCAGACTTTACTCAAGGCAACAC
TGGACAGCGTTGTAGAAGAATGTGTCAGCTTTGTGGGAGTGGATATTAATATCTGTTCAGAAGTTTTGTTAAGGCATATT
GCAGGACTCAATGCCAACAGAGCCAAAAATATTATTGAATGGCGAGAGAAAAATGGACCCTTTATCAACCGAGAACAGCT
GAAGAAAGTGAAGGGGCTGGGTCCGAAATCCTTCCAACAGTGTGCTGGCTTCATCAGAATCAACCAGGATTATATCCGAA
CATTTTGCAGTCAGCAAACTGAATCTTCAGGCCAAATTCAAGGAGTCACTGTAACATCTTTAGCAGAGGTTGAGGTCACA
AATCAGAAGCAGGGCAAAAAGAAGAGCAAAACTGCAGTGAATGTTTTACTGAAGCCAAATCCTTTGGACCAAACTTGTAT
TCATCCAGAATCATATGACATAGCAATGAGGTTTTTATCATCCATTGGAGGGACACTCTTTGAGATTGGAAGGCCTGAAA
TACAACAAAAAATAATTTCATTTCTTGAGAAGGAAGGAATAGAGAAAGCTGCAGAAAGATTGCAAACAACGGTACACACT
TTACAGGTCATCATAGATGGTCTCCGTCAGCCTGAAAGCTTTGACTTTCGAACAGATTTTGATAAACCTGATTTTAAGAG
AAGCATAGTATGCCTGGAAGATCTGCAGGTCGGGACAGTTCTTACAGGCAGAGTCGAGAATGCCACTCTCTTTGGAATTT
TTGTGGATATAGGAGTGGGGAAAGCTGGTTTAATTCCCATAAGAAATGTAACAGAAGCAAAACTTTCGAAAACAAAGAAG
AGAAGGAGCCTTGGACTAGGCCCCGGAGAAAAAGTGGAAGTCCAAGTACTCAACATTGACATCTCCCGATCTAGGATTAC
TCTGGACCTCATTCGGGTGTTATGA
ATGTCATCACTGCCAAGAAGAGCAAAAGTACAGGTCCAGGGTGTGGTATCAAAAGATGAATTTTCTTCAGTCTCTGAGTT
ATCATCTGCCTCTGAAGAAGATGACAAGGAAGATAGTTCCTGGGAGCCCCAAAAGAAAGCTTCCAGAAGCCGTAAACAGC
TCGTTCCCAAGGAATCCAAACCAAAGAGGATGCCTCGGGTGAAGAAGAATACCCCACAGATCAGTGATGACTCAGAAGTT
GTTGTTAAGGAGGAGCTGAATAGCTCTGTGGCTGCTGCTGATACTGCTTTGGAAGACAGAAAAAATAAATTGGATACTGT
AGAGACTCCAAAAACAGCCAAGACAAAACGGAAATGTTCAGCGCAGCCACATTCAGCTCAGAGGACCAAAAAGCTGAAAG
TTGATGAAGAAACCAGCAAAGCCACCAACTTAGAGGGTGAGAGTAATAGTTCAGAGACACCATCCACAAGCACTATATGC
AGAGGTACCTGCAAGAAGGAAGAGAATGAAGATGACTTTACATTTGGTCAGTCTCCTTTAAAGAAAATGAAGACTGAAAC
ATGTCCTCAGGGACAGCCTGTCAAGTTTCCAGCAAATGCCAATAATACTAAAGAGGAGGTGGAAATGAATTGGGACATAG
TACAGGTTTTATCTGAAAGAACTAATGTTGAACCTTGGGTTTGTGCCAACGCCATTCGTCTCTTTAATGATGACAACACA
ATTCCCTTCATTATACGTTATCGAAAAGAGCTCATTAATAACCTTGATGCTGATTCCTTGAGAGAAGTTCAACAAACCCT
AGAAGAACTACGGGCCGTTGTAAAGAAAGTTCATAATACAATCCAGAAAATTAAGAAGGAAGGGAAGATGTCTGAGTGCT
TGTTAAAAGCCTTGCTGAATTGTAAAACATTTGAAGAACTAGAACATGTGTCTGCTCCATATAAAACTGGGAGCAAAGGG
ACCAAAGCCCAGAGAGCAAGACAGTTGGGCTTAGAAGGAGCAGCCAGGACACTGCTTGAGAAACCAGGGGAGCTTAATCT
GCTATCATACATTAGGCCTGATGTTAAAGGGCTTTCAACGCTCCGGGATATTGAAACAGGAGTGCAGCATATTTTAGCAG
ACATGATTGCTAAAGACAAAGACACACTTGACTTCATTCGGAACTTGTGCCAGAACAGACATGTTTCTATCCAGTCGTCT
CTGGCAAAAGTGTCCTCAAAAAAGGTAAATGAGAAAGATGTTGATAAGTTTCTGCTGTACCAGCATTTTTCATGCAACAT
AAGAACCATTCACCATCATCAGATTCTTGCAATTAACCGTGGGGAAAATTTGAAGATACTGACGGTTAAGGTCGATATTT
CTGATGGAGTGAAGAATGAATTCTGTAGGTGGTGCATCCAAAACAGATGGAGACCACGTAGCTTTGCAAGGCCAGAGGTA
ATGAAGATCTTACATAATTCACTAGATGATTCCTTTAAACGCCTTATTTATCCTCTCCTCTGTAGAGAATTCAGAGCCAA
ACTAACATCAGATGCAGAGAAGGAATCAGTAATGATGTTTGGACGGAATCTTCGTCAGCTCCTTTTAACAAGCCCTGTTC
CAGGGCGCACCTTAATGGGAGTGGATCCTGGTTATAAACATGGTTGCAAATTAGCTATAATTTCTCCTACCAGTCAGATA
CTTCATACTGATGTGGTTTACCTGCATTGTGGACAAGGCTTCCGAGAGGCAGAGAAAATAAAGAGGCTTTTGCTGAATTT
CAACTGCAGCACAGTAGTGATTGGAAATGGAACTGCCTGCCGGGAGACAGAAGCTTACTTTGCTGACCTGATAATGAAAA
ATTATTTTGCACCACTGGATGTTGTTTACTGTATCGTCAGTGAAGCAGGAGCATCAATCTACAGTGTCAGCCCTGAAGCT
AGCAAAGAGATGCCAGGGCTGGACCCTAACTTAAGAAGTGCAGTTTCCATAGCAAGGCGTGTACAAGATCCATTAGCTGA
GCTAGTGAAAATTGAGCCAAAGCACATTGGAGTTGGAATGTATCAGCATGATGTATCCCAGACTTTACTCAAGGCAACAC
TGGACAGCGTTGTAGAAGAATGTGTCAGCTTTGTGGGAGTGGATATTAATATCTGTTCAGAAGTTTTGTTAAGGCATATT
GCAGGACTCAATGCCAACAGAGCCAAAAATATTATTGAATGGCGAGAGAAAAATGGACCCTTTATCAACCGAGAACAGCT
GAAGAAAGTGAAGGGGCTGGGTCCGAAATCCTTCCAACAGTGTGCTGGCTTCATCAGAATCAACCAGGATTATATCCGAA
CATTTTGCAGTCAGCAAACTGAATCTTCAGGCCAAATTCAAGGAGTCACTGTAACATCTTTAGCAGAGGTTGAGGTCACA
AATCAGAAGCAGGGCAAAAAGAAGAGCAAAACTGCAGTGAATGTTTTACTGAAGCCAAATCCTTTGGACCAAACTTGTAT
TCATCCAGAATCATATGACATAGCAATGAGGTTTTTATCATCCATTGGAGGGACACTCTTTGAGATTGGAAGGCCTGAAA
TACAACAAAAAATAATTTCATTTCTTGAGAAGGAAGGAATAGAGAAAGCTGCAGAAAGATTGCAAACAACGGTACACACT
TTACAGGTCATCATAGATGGTCTCCGTCAGCCTGAAAGCTTTGACTTTCGAACAGATTTTGATAAACCTGATTTTAAGAG
AAGCATAGTATGCCTGGAAGATCTGCAGGTCGGGACAGTTCTTACAGGCAGAGTCGAGAATGCCACTCTCTTTGGAATTT
TTGTGGATATAGGAGTGGGGAAAGCTGGTTTAATTCCCATAAGAAATGTAACAGAAGCAAAACTTTCGAAAACAAAGAAG
AGAAGGAGCCTTGGACTAGGCCCCGGAGAAAAAGTGGAAGTCCAAGTACTCAACATTGACATCTCCCGATCTAGGATTAC
TCTGGACCTCATTCGGGTGTTATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 26 .39 RPM |
| SRP051959_skeletal_muscle | 8 .95 RPM |
| SRP051959_lymph_node | 25 .94 RPM |
| SRP051959_lung | 22 .14 RPM |
| SRP051959_liver | 16 .74 RPM |
| SRP051959_kidney | 16 .66 RPM |
| SRP051959_heart | 15 .91 RPM |
| SRP051959_colon | 21 .26 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_588 | 93.34 | 96.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000000727 retrocopies