Parental gene: | PLEKHA1, ENSCJAG00000001251 |
| Aliases: | None |
| Description: | pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 [Source:HGNC Symbol;Acc:14335] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 12:110335105..110380427(+) |
>ENSCJAG00000001251
ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAATTTCTTCG
AAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATCAT
CACGTGTTGGAGCCATTAAACTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTGAGGCCAAAGGCTGAGTTCTGT
TTTGTTATGAATGCAGGAATGAGGAAGTACTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGAATGGGTAAATGTGTT
AAACAAAGCTATAAAAATTACAGTACCAAAGCAGTCAGACTCACAGCCTAATTCTGATAACCTAAGTCGCCATGGTGAAT
GTGGGAAGAAGCAAGTGTCTTACAGAACTGATATTGTTGGTGGCGTACCCATCATTACTCCCACTCAGAAAGAAGAAGTA
AATGAATGTGGTGAAAGTATTGACAGAAATCATCTGAAACGGTCACAAAGCCATCTCCCTTACTTTGCTCCTAAACCACC
TCTGGATAGTGCAGTTATCAAAGCTGGATATTGTGTCAAGCAAGGAGCTGTGATGAAAAACTGGAAGAGAAGATATTTTC
AGTTGGATGAAAACACAATAGGCTACTTCAAATCTGAGCTGGAAAAGGAACCTCTTCGTGTTATTCCACTTAAAGAGGTT
CATAAAGTCCAGGAATGTAAGCAAAGTGACATAATGATGAGGGACAACCTCTTTGAAATTGTAACAACGTCTCGAACTTT
CTACGTGCAGGCTGATAGCCCTGAAGAGATGCACAGCTGGATTAAAGCAGTCTCTGGCGCCATCGTAGCACAGCGGGGGC
CCGGCAGATCTGCGTCTTCTATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGAGCATTCCCCCGGTCCTT
CAGAATCCAAACACGCTTTCCGTCCCGCCACCGCAGCCGCCACCACCTCACATTCCACAGCCTCTCGCAGCAACTCTTTG
GTCTCAATTACCATGGAGAAGCGAAGGATTTTTACCAATTCTCTTGCCAAGGTCA
ATGCCTTATGTGGATCGTCAGAATCGCATTTGTGGTTTTCTAGACATTGAAGAAAATGAAAACAGTGGGAAATTTCTTCG
AAGGTACTTCATACTGGATACCAGAGAAGATAGTTTCGTGTGGTACATGGATAATCCACAGAACCTACCTTCTGGATCAT
CACGTGTTGGAGCCATTAAACTTACCTACATTTCAAAGGTTAGCGATGCTACTAAGCTGAGGCCAAAGGCTGAGTTCTGT
TTTGTTATGAATGCAGGAATGAGGAAGTACTTCCTACAAGCCAATGATCAGCAGGACCTAGTGGAATGGGTAAATGTGTT
AAACAAAGCTATAAAAATTACAGTACCAAAGCAGTCAGACTCACAGCCTAATTCTGATAACCTAAGTCGCCATGGTGAAT
GTGGGAAGAAGCAAGTGTCTTACAGAACTGATATTGTTGGTGGCGTACCCATCATTACTCCCACTCAGAAAGAAGAAGTA
AATGAATGTGGTGAAAGTATTGACAGAAATCATCTGAAACGGTCACAAAGCCATCTCCCTTACTTTGCTCCTAAACCACC
TCTGGATAGTGCAGTTATCAAAGCTGGATATTGTGTCAAGCAAGGAGCTGTGATGAAAAACTGGAAGAGAAGATATTTTC
AGTTGGATGAAAACACAATAGGCTACTTCAAATCTGAGCTGGAAAAGGAACCTCTTCGTGTTATTCCACTTAAAGAGGTT
CATAAAGTCCAGGAATGTAAGCAAAGTGACATAATGATGAGGGACAACCTCTTTGAAATTGTAACAACGTCTCGAACTTT
CTACGTGCAGGCTGATAGCCCTGAAGAGATGCACAGCTGGATTAAAGCAGTCTCTGGCGCCATCGTAGCACAGCGGGGGC
CCGGCAGATCTGCGTCTTCTATGCGGCAGGCCAGAAGGCTGTCGAACCCTTGTATACAGAGGAGCATTCCCCCGGTCCTT
CAGAATCCAAACACGCTTTCCGTCCCGCCACCGCAGCCGCCACCACCTCACATTCCACAGCCTCTCGCAGCAACTCTTTG
GTCTCAATTACCATGGAGAAGCGAAGGATTTTTACCAATTCTCTTGCCAAGGTCA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .94 RPM |
| SRP051959_skeletal_muscle | 3 .71 RPM |
| SRP051959_lymph_node | 5 .00 RPM |
| SRP051959_lung | 7 .26 RPM |
| SRP051959_liver | 5 .89 RPM |
| SRP051959_kidney | 9 .25 RPM |
| SRP051959_heart | 6 .07 RPM |
| SRP051959_colon | 5 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000010036 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000010702 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004811 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_947 | 99.33 | 82.19 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000001251 retrocopies