Parental gene:

TRA2A, ENSCJAG00000001509

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:8:32232211..32250136(+)


>ENSCJAG00000001509
TCAGGAGCAATCAATATAAATAATTACGGTACTTTAAATGAGTCTCGCTCTCAGTCAAAATCTCCAACGGGAACTCCTGC
TCGTGTAAAATCGGAGAGCAGGTCAGGATCTCGTAGTCCATCAAGGGTTTCCAAACACTCTGAATCCCATTCTCGATCAA
GATCAAAATCCAGAGATAGGATAAAAGTTCATTCTCATAGACGTTATACTCGATCCAGATCCCACTCTCACTCTCATAGG
AGACGATCTCGAAGTAGATCATATACACCAGAATACCGGCGGCGAAGGAGCCGAAGCCATTCTCCAATGTCTAACCGGAG
AAGACATACTGGCAGCAGGGCAAACCCAGATCCCAACACTTGCCTTGGAGTGTTTGGCCTCAGTTTGTACACAACAGAGA
GAGATCTTCGTGAAGTATTTTCTCGATATGGACCATTGAGTGGTGTCAATGTGGTTTATGATCAGCGAACGGGGCGATCT
CGAGGATTTGCTTTTGTATATTTTGAGCGAATAGATGACTCAAAGGAGGCTATGGAAAGAGCAAATGGAATGGAGCTGGA
TGGTAGAAGAATTCGAGTGGATTATTCTATCACCAAGAGAGCGCACACACCTACACCAGGCATCTACATGGGCAGACCAA
CCCAAAGAGAAAATTTTTTTCCCGTATTTAAAATTGATTTTGGCAAGGTGGGTGGGAGACGTCGAGATTCTTACTATGAT
AGAGGTTATGATCGTGGGTATGACAGATATGAAGACTATGATTACCGGTACAGAAGACGATCACCTTCTCCTTATTATAG
TCGATACAGATCACGATCACGATCTCGTTCCTACAGCCCAAGACGCTACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 27 .65 RPM
SRP051959_skeletal_muscle 15 .02 RPM
SRP051959_lymph_node 29 .86 RPM
SRP051959_lung 24 .87 RPM
SRP051959_liver 13 .19 RPM
SRP051959_kidney 18 .21 RPM
SRP051959_heart 16 .26 RPM
SRP051959_colon 14 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001130 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000007250 ortholog_one2one 2 retrogenes
Homo sapiens ENSG00000164548 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000009053 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000013480 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000014794 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000009733 ortholog_one2one 3 retrogenes
Pongo abelii ENSPPYG00000017728 ortholog_one2one 1 retrogene
Pan troglodytes ENSPTRG00000018988 ortholog_one2one 1 retrogene
Sorex araneus ENSSARG00000012900 ortholog_one2one 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_1759 88.19 95.41
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Download FASTA sequences of all ENSCJAG00000001509 retrocopies